RNA–Protein interactions for RNA: ENST00000452520.1

HMGB1P26-201, Transcript of high mobility group box 1 pseudogene 26, humanhuman

BASIC

Gene HMGB1P26, Length 628 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P26-201ENST00000452520 NXPE3Q969Y0 559 aa8.31□□□□□ -1.08
HMGB1P26-201ENST00000452520 TCF12Q99081 682 aa8.31□□□□□ -1.08
HMGB1P26-201ENST00000452520 LIN7BQ9HAP6 207 aa8.31□□□□□ -1.08
HMGB1P26-201ENST00000452520 LRRC4BQ9NT99 713 aa8.31□□□□□ -1.08
HMGB1P26-201ENST00000452520 NAGPAQ9UK23 515 aa8.31□□□□□ -1.08
HMGB1P26-201ENST00000452520 PDE2AO00408 941 aaPredicted RBP8.3□□□□□ -1.08
HMGB1P26-201ENST00000452520 EIF4BP23588 611 aaKnown RBP8.3□□□□□ -1.08
HMGB1P26-201ENST00000452520 LYPD4Q6UWN0 246 aa8.3□□□□□ -1.08
HMGB1P26-201ENST00000452520 CCNJLQ8IV13 435 aa8.3□□□□□ -1.08
HMGB1P26-201ENST00000452520 MICALL1Q8N3F8 863 aa8.3□□□□□ -1.08
HMGB1P26-201ENST00000452520 TMEM102Q8N9M5 508 aaPredicted RBP8.3□□□□□ -1.08
HMGB1P26-201ENST00000452520 PLD4Q96BZ4 506 aa8.3□□□□□ -1.08
HMGB1P26-201ENST00000452520 HHIPQ96QV1 700 aa8.3□□□□□ -1.08
HMGB1P26-201ENST00000452520 POP1Q99575 1024 aaKnown RBP8.3□□□□□ -1.08
HMGB1P26-201ENST00000452520 SMG9Q9H0W8 520 aaKnown RBP8.3□□□□□ -1.08
HMGB1P26-201ENST00000452520 C12orf49Q9H741 205 aa8.3□□□□□ -1.08
HMGB1P26-201ENST00000452520 STARD13Q9Y3M8 1113 aa8.3□□□□□ -1.08
HMGB1P26-201ENST00000452520 CELA2BP08218 269 aaPredicted RBP8.29□□□□□ -1.08
HMGB1P26-201ENST00000452520 ITGAEP38570 1179 aa8.29□□□□□ -1.08
HMGB1P26-201ENST00000452520 PSAPL1Q6NUJ1 521 aa8.29□□□□□ -1.08
HMGB1P26-201ENST00000452520 TTC9Q92623 222 aa8.29□□□□□ -1.08
HMGB1P26-201ENST00000452520 BTBD6Q96KE9 485 aa8.29□□□□□ -1.08
HMGB1P26-201ENST00000452520 LPIN3Q9BQK8 851 aa8.29□□□□□ -1.08
HMGB1P26-201ENST00000452520 BACH2Q9BYV9 841 aa8.29□□□□□ -1.08
HMGB1P26-201ENST00000452520 SRCIN1Q9C0H9 1055 aa8.29□□□□□ -1.08
HMGB1P26-201ENST00000452520 FRRS1LQ9P0K9 344 aa8.29□□□□□ -1.08
HMGB1P26-201ENST00000452520 TRAK1Q9UPV9 953 aa8.29□□□□□ -1.08
HMGB1P26-201ENST00000452520 SMNDC1O75940 238 aaKnown RBP eCLIP8.28□□□□□ -1.08
HMGB1P26-201ENST00000452520 LDLRAD1Q5T700 205 aa8.28□□□□□ -1.08
HMGB1P26-201ENST00000452520 CEP135Q66GS9 1140 aa8.28□□□□□ -1.08
HMGB1P26-201ENST00000452520 PRPF40BQ6NWY9 871 aaKnown RBP8.28□□□□□ -1.08
HMGB1P26-201ENST00000452520 C20orf204Q6ZNR8 217 aa8.28□□□□□ -1.08
HMGB1P26-201ENST00000452520 WHAMMQ8TF30 809 aa8.28□□□□□ -1.08
HMGB1P26-201ENST00000452520 BHLHE41Q9C0J9 482 aaPredicted RBP8.28□□□□□ -1.08
HMGB1P26-201ENST00000452520 FAM8A1Q9UBU6 413 aa8.28□□□□□ -1.08
HMGB1P26-201ENST00000452520 VTI1BQ9UEU0 232 aa8.28□□□□□ -1.08
HMGB1P26-201ENST00000452520 TMEM238LA0A1B0GVL6 79 aa8.27□□□□□ -1.09
HMGB1P26-201ENST00000452520 SHISA8B8ZZ34 492 aa8.27□□□□□ -1.09
HMGB1P26-201ENST00000452520 RGS9O75916 674 aaPredicted RBP8.27□□□□□ -1.09
HMGB1P26-201ENST00000452520 GRIA4P48058 902 aa8.27□□□□□ -1.09
HMGB1P26-201ENST00000452520 NUDT8Q8WV74 236 aa8.27□□□□□ -1.09
HMGB1P26-201ENST00000452520 CTSHP09668 335 aa8.26□□□□□ -1.09
HMGB1P26-201ENST00000452520 CHSY3Q70JA7 882 aa8.26□□□□□ -1.09
HMGB1P26-201ENST00000452520 ABCB6Q9NP58 842 aa8.26□□□□□ -1.09
HMGB1P26-201ENST00000452520 METTL12A8MUP2 240 aa8.25□□□□□ -1.09
HMGB1P26-201ENST00000452520 GSTT1P30711 240 aa8.25□□□□□ -1.09
HMGB1P26-201ENST00000452520 FCGRTP55899 365 aa8.25□□□□□ -1.09
HMGB1P26-201ENST00000452520 SPRED3Q2MJR0 410 aa8.25□□□□□ -1.09
HMGB1P26-201ENST00000452520 TSNAXIP1Q2TAA8 658 aa8.25□□□□□ -1.09
HMGB1P26-201ENST00000452520 KANK3Q6NY19 840 aa8.25□□□□□ -1.09
HMGB1P26-201ENST00000452520 ADAMTSL4Q6UY14 1074 aa8.25□□□□□ -1.09
HMGB1P26-201ENST00000452520 ASAP3Q8TDY4 903 aa8.25□□□□□ -1.09
HMGB1P26-201ENST00000452520 ADAM19Q9H013 955 aa8.25□□□□□ -1.09
HMGB1P26-201ENST00000452520 TRIM33Q9UPN9 1127 aa8.25□□□□□ -1.09
HMGB1P26-201ENST00000452520 A0A096LPE4 126 aa8.24□□□□□ -1.09
HMGB1P26-201ENST00000452520 A0A1W2PPZ6 126 aa8.24□□□□□ -1.09
HMGB1P26-201ENST00000452520 ALBP02768 609 aa8.24□□□□□ -1.09
HMGB1P26-201ENST00000452520 USP17L7P0C7H9 530 aa8.24□□□□□ -1.09
HMGB1P26-201ENST00000452520 XRCC5P13010 732 aaKnown RBP8.24□□□□□ -1.09
HMGB1P26-201ENST00000452520 GRIK5Q16478 980 aa8.24□□□□□ -1.09
HMGB1P26-201ENST00000452520 C3orf58Q8NDZ4 430 aa8.24□□□□□ -1.09
HMGB1P26-201ENST00000452520 JPH1Q9HDC5 661 aaPredicted RBP8.24□□□□□ -1.09
HMGB1P26-201ENST00000452520 USP31Q70CQ4 1352 aa8.23□□□□□ -1.09
HMGB1P26-201ENST00000452520 M0R082 166 aa8.23□□□□□ -1.09
HMGB1P26-201ENST00000452520 LILRB5O75023 590 aa8.23□□□□□ -1.09
HMGB1P26-201ENST00000452520 RECKO95980 971 aa8.23□□□□□ -1.09
HMGB1P26-201ENST00000452520 PTPRAP18433 802 aa8.23□□□□□ -1.09
HMGB1P26-201ENST00000452520 AMPD1P23109 780 aa8.23□□□□□ -1.09
HMGB1P26-201ENST00000452520 ITPKAP23677 461 aa8.23□□□□□ -1.09
HMGB1P26-201ENST00000452520 AFF1P51825 1210 aaKnown RBP8.23□□□□□ -1.09
HMGB1P26-201ENST00000452520 PTPN12Q05209 780 aaKnown RBP8.23□□□□□ -1.09
HMGB1P26-201ENST00000452520 ZNF385CQ66K41 422 aaPredicted RBP8.23□□□□□ -1.09
HMGB1P26-201ENST00000452520 GDF6Q6KF10 455 aaPredicted RBP8.23□□□□□ -1.09
HMGB1P26-201ENST00000452520 DTHD1Q6ZMT9 781 aa8.23□□□□□ -1.09
HMGB1P26-201ENST00000452520 C8orf86Q6ZUL3 223 aa8.23□□□□□ -1.09
HMGB1P26-201ENST00000452520 ZNF417Q8TAU3 575 aa8.23□□□□□ -1.09
HMGB1P26-201ENST00000452520 BSNDQ8WZ55 320 aa8.23□□□□□ -1.09
HMGB1P26-201ENST00000452520 ZNF587Q96SQ5 575 aaPredicted RBP8.23□□□□□ -1.09
HMGB1P26-201ENST00000452520 LACRTQ9GZZ8 138 aa8.23□□□□□ -1.09
HMGB1P26-201ENST00000452520 ZFYVE1Q9HBF4 777 aa8.23□□□□□ -1.09
HMGB1P26-201ENST00000452520 WIPF1O43516 503 aa8.22□□□□□ -1.09
HMGB1P26-201ENST00000452520 MAP3K10Q02779 954 aa8.22□□□□□ -1.09
HMGB1P26-201ENST00000452520 CACTIN-AS1Q8N1I8 211 aa8.22□□□□□ -1.09
HMGB1P26-201ENST00000452520 TMEM87AQ8NBN3 555 aa8.22□□□□□ -1.09
HMGB1P26-201ENST00000452520 CRELD1Q96HD1 420 aa8.22□□□□□ -1.09
HMGB1P26-201ENST00000452520 MUC3BQ9H195 1237 aa8.22□□□□□ -1.09
HMGB1P26-201ENST00000452520 PRDM6Q9NQX0 595 aa8.22□□□□□ -1.09
HMGB1P26-201ENST00000452520 SH2B1Q9NRF2 756 aaPredicted RBP8.22□□□□□ -1.09
HMGB1P26-201ENST00000452520 AKAP2Q9Y2D5 859 aa8.22□□□□□ -1.09
HMGB1P26-201ENST00000452520 CDC27P30260 824 aa8.21□□□□□ -1.1
HMGB1P26-201ENST00000452520 TAF1CQ15572 869 aaPredicted RBP8.21□□□□□ -1.1
HMGB1P26-201ENST00000452520 IL22RA1Q8N6P7 574 aa8.21□□□□□ -1.1
HMGB1P26-201ENST00000452520 ENAMQ9NRM1 1142 aa8.21□□□□□ -1.1
HMGB1P26-201ENST00000452520 IGSF5Q9NSI5 407 aa8.21□□□□□ -1.1
HMGB1P26-201ENST00000452520 SOX13Q9UN79 622 aa8.21□□□□□ -1.1
HMGB1P26-201ENST00000452520 BAG6P46379 1132 aa8.2□□□□□ -1.1
HMGB1P26-201ENST00000452520 MEI1Q5TIA1 1274 aa8.2□□□□□ -1.1
HMGB1P26-201ENST00000452520 VN1R5Q7Z5H4 357 aa8.2□□□□□ -1.1
HMGB1P26-201ENST00000452520 SCAMP3O14828 347 aaKnown RBP8.19□□□□□ -1.1
HMGB1P26-201ENST00000452520 ARHGEF15O94989 841 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms