RNA–Protein interactions for RNA: ENST00000452047.1

CPSF4-208, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 3

Gene CPSF4, Length 687 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-208ENST00000452047 SSH1Q8WYL5 1049 aa15.81■□□□□ 0.12
CPSF4-208ENST00000452047 CDCA7LQ96GN5 454 aa15.81■□□□□ 0.12
CPSF4-208ENST00000452047 WDR33Q9C0J8 1336 aaKnown RBP15.81■□□□□ 0.12
CPSF4-208ENST00000452047 COA1Q9GZY4 146 aa15.81■□□□□ 0.12
CPSF4-208ENST00000452047 C9orf78Q9NZ63 289 aaPredicted RBP15.81■□□□□ 0.12
CPSF4-208ENST00000452047 IRS2Q9Y4H2 1338 aa15.81■□□□□ 0.12
CPSF4-208ENST00000452047 UTYO14607 1347 aa15.8■□□□□ 0.12
CPSF4-208ENST00000452047 PTPRCP08575 1304 aa15.8■□□□□ 0.12
CPSF4-208ENST00000452047 DACT2Q5SW24 774 aa15.8■□□□□ 0.12
CPSF4-208ENST00000452047 RBM26Q5T8P6 1007 aaKnown RBP15.8■□□□□ 0.12
CPSF4-208ENST00000452047 USP48Q86UV5 1035 aa15.8■□□□□ 0.12
CPSF4-208ENST00000452047 KAZALD1Q96I82 304 aa15.8■□□□□ 0.12
CPSF4-208ENST00000452047 CHMP3Q9Y3E7 222 aa15.8■□□□□ 0.12
CPSF4-208ENST00000452047 ASTN2O75129 1339 aaPredicted RBP15.79■□□□□ 0.12
CPSF4-208ENST00000452047 FOXN1O15353 648 aa15.79■□□□□ 0.12
CPSF4-208ENST00000452047 NBPF7P0C2Y1 421 aaPredicted RBP15.79■□□□□ 0.12
CPSF4-208ENST00000452047 CYP4F22Q6NT55 531 aa15.79■□□□□ 0.12
CPSF4-208ENST00000452047 DLK2Q6UY11 383 aa15.79■□□□□ 0.12
CPSF4-208ENST00000452047 KRT26Q7Z3Y9 468 aa15.79■□□□□ 0.12
CPSF4-208ENST00000452047 SUCLG2Q96I99 432 aa15.79■□□□□ 0.12
CPSF4-208ENST00000452047 CAPNS2Q96L46 248 aa15.79■□□□□ 0.12
CPSF4-208ENST00000452047 WBP1LQ9NX94 342 aa15.79■□□□□ 0.12
CPSF4-208ENST00000452047 GGA3Q9NZ52 723 aa15.79■□□□□ 0.12
CPSF4-208ENST00000452047 ADM5C9JUS6 153 aa15.78■□□□□ 0.12
CPSF4-208ENST00000452047 SNAP23O00161 211 aa15.78■□□□□ 0.12
CPSF4-208ENST00000452047 USP17L8P0C7I0 530 aa15.78■□□□□ 0.12
CPSF4-208ENST00000452047 STRIP1Q5VSL9 837 aa15.78■□□□□ 0.12
CPSF4-208ENST00000452047 C15orf52Q6ZUT6 534 aaKnown RBP15.78■□□□□ 0.12
CPSF4-208ENST00000452047 HHIPL1Q96JK4 782 aa15.78■□□□□ 0.12
CPSF4-208ENST00000452047 MXD3Q9BW11 206 aa15.78■□□□□ 0.12
CPSF4-208ENST00000452047 ZNF408Q9H9D4 720 aa15.78■□□□□ 0.12
CPSF4-208ENST00000452047 MYO3BQ8WXR4 1341 aa15.77■□□□□ 0.12
CPSF4-208ENST00000452047 TAF5LO75529 589 aa15.77■□□□□ 0.12
CPSF4-208ENST00000452047 ECE1P42892 770 aa15.77■□□□□ 0.12
CPSF4-208ENST00000452047 KCNJ4P48050 445 aa15.77■□□□□ 0.12
CPSF4-208ENST00000452047 CCDC57Q2TAC2 916 aa15.77■□□□□ 0.12
CPSF4-208ENST00000452047 ALDH1L2Q3SY69 923 aa15.77■□□□□ 0.12
CPSF4-208ENST00000452047 HELBQ8NG08 1087 aaPredicted RBP15.77■□□□□ 0.12
CPSF4-208ENST00000452047 DCPSQ96C86 337 aaKnown RBP15.77■□□□□ 0.12
CPSF4-208ENST00000452047 ZNF594Q96JF6 807 aaPredicted RBP15.77■□□□□ 0.12
CPSF4-208ENST00000452047 MYOZ2Q9NPC6 264 aa15.77■□□□□ 0.12
CPSF4-208ENST00000452047 CAPN15O75808 1086 aa15.76■□□□□ 0.11
CPSF4-208ENST00000452047 RABL6Q3YEC7 729 aaPredicted RBP15.76■□□□□ 0.11
CPSF4-208ENST00000452047 LDHAL6AQ6ZMR3 332 aa15.76■□□□□ 0.11
CPSF4-208ENST00000452047 PAXIP1Q6ZW49 1069 aaPredicted RBP15.76■□□□□ 0.11
CPSF4-208ENST00000452047 PITPNM2Q9BZ72 1349 aa15.75■□□□□ 0.11
CPSF4-208ENST00000452047 MAP2K1Q02750 393 aaPredicted RBP15.75■□□□□ 0.11
CPSF4-208ENST00000452047 SCARF1Q14162 830 aa15.75■□□□□ 0.11
CPSF4-208ENST00000452047 TAF7LQ5H9L4 462 aa15.75■□□□□ 0.11
CPSF4-208ENST00000452047 ANGEL2Q5VTE6 544 aaKnown RBP15.75■□□□□ 0.11
CPSF4-208ENST00000452047 TTLL5Q6EMB2 1281 aa15.75■□□□□ 0.11
CPSF4-208ENST00000452047 SULF1Q8IWU6 871 aa15.75■□□□□ 0.11
CPSF4-208ENST00000452047 AIDAQ96BJ3 306 aa15.75■□□□□ 0.11
CPSF4-208ENST00000452047 BICC1Q9H694 974 aaKnown RBP15.75■□□□□ 0.11
CPSF4-208ENST00000452047 CD209Q9NNX6 404 aa15.75■□□□□ 0.11
CPSF4-208ENST00000452047 CT47B1P0C2W7 299 aaPredicted RBP15.74■□□□□ 0.11
CPSF4-208ENST00000452047 GRM1Q13255 1194 aa15.74■□□□□ 0.11
CPSF4-208ENST00000452047 ANKRD44Q8N8A2 993 aa15.74■□□□□ 0.11
CPSF4-208ENST00000452047 FBXW7Q969H0 707 aa15.74■□□□□ 0.11
CPSF4-208ENST00000452047 CNNM1Q9NRU3 951 aa15.74■□□□□ 0.11
CPSF4-208ENST00000452047 SMC4Q9NTJ3 1288 aa15.74■□□□□ 0.11
CPSF4-208ENST00000452047 AOC2O75106 756 aa15.73■□□□□ 0.11
CPSF4-208ENST00000452047 MAP2K2P36507 400 aa15.73■□□□□ 0.11
CPSF4-208ENST00000452047 CTCFP49711 727 aaPredicted RBP15.73■□□□□ 0.11
CPSF4-208ENST00000452047 GTF2IP78347 998 aa15.73■□□□□ 0.11
CPSF4-208ENST00000452047 NBPF9Q3BBW0 867 aa15.73■□□□□ 0.11
CPSF4-208ENST00000452047 OGFOD1Q8N543 542 aa15.73■□□□□ 0.11
CPSF4-208ENST00000452047 USP44Q9H0E7 712 aa15.73■□□□□ 0.11
CPSF4-208ENST00000452047 GBA2Q9HCG7 927 aaPredicted RBP15.73■□□□□ 0.11
CPSF4-208ENST00000452047 PRDM10Q9NQV6 1147 aa15.73■□□□□ 0.11
CPSF4-208ENST00000452047 ARAP2Q8WZ64 1704 aa15.73■□□□□ 0.11
CPSF4-208ENST00000452047 ECM29Q5VYK3 1845 aa15.73■□□□□ 0.11
CPSF4-208ENST00000452047 PAPPA2Q9BXP8 1791 aa15.72■□□□□ 0.11
CPSF4-208ENST00000452047 WNT10BO00744 389 aa15.72■□□□□ 0.11
CPSF4-208ENST00000452047 IL1R1P14778 569 aa15.72■□□□□ 0.11
CPSF4-208ENST00000452047 MMP14P50281 582 aa15.72■□□□□ 0.11
CPSF4-208ENST00000452047 HUNKP57058 714 aa15.72■□□□□ 0.11
CPSF4-208ENST00000452047 ZNF804AQ7Z570 1209 aa15.72■□□□□ 0.11
CPSF4-208ENST00000452047 TNS4Q8IZW8 715 aa15.72■□□□□ 0.11
CPSF4-208ENST00000452047 CDCA5Q96FF9 252 aa15.72■□□□□ 0.11
CPSF4-208ENST00000452047 PUS3Q9BZE2 481 aaKnown RBP15.72■□□□□ 0.11
CPSF4-208ENST00000452047 RIPOR2Q9Y4F9 1068 aa15.72■□□□□ 0.11
CPSF4-208ENST00000452047 PLIN1O60240 522 aa15.71■□□□□ 0.11
CPSF4-208ENST00000452047 HSPA8P11142 646 aaKnown RBP15.71■□□□□ 0.11
CPSF4-208ENST00000452047 BRPF1P55201 1214 aaPredicted RBP15.71■□□□□ 0.11
CPSF4-208ENST00000452047 KIAA0825Q8IV33 1275 aa15.71■□□□□ 0.11
CPSF4-208ENST00000452047 CERS5Q8N5B7 392 aa15.71■□□□□ 0.11
CPSF4-208ENST00000452047 ZBED3Q96IU2 234 aaPredicted RBP15.71■□□□□ 0.11
CPSF4-208ENST00000452047 LBX1P52954 281 aa15.7■□□□□ 0.1
CPSF4-208ENST00000452047 UBE4AQ14139 1066 aa15.7■□□□□ 0.1
CPSF4-208ENST00000452047 C2orf69Q8N8R5 385 aa15.7■□□□□ 0.1
CPSF4-208ENST00000452047 SCAF8Q9UPN6 1271 aaKnown RBP15.7■□□□□ 0.1
CPSF4-208ENST00000452047 MROH5Q6ZUA9 1318 aa15.69■□□□□ 0.1
CPSF4-208ENST00000452047 FAM155AB1AL88 458 aaPredicted RBP15.69■□□□□ 0.1
CPSF4-208ENST00000452047 SASH1O94885 1247 aa15.69■□□□□ 0.1
CPSF4-208ENST00000452047 VGLL2Q8N8G2 317 aa15.69■□□□□ 0.1
CPSF4-208ENST00000452047 HDAC9Q9UKV0 1011 aa15.69■□□□□ 0.1
CPSF4-208ENST00000452047 FKBP1AP62942 108 aaKnown RBP15.68■□□□□ 0.1
CPSF4-208ENST00000452047 NOGQ13253 232 aa15.68■□□□□ 0.1
CPSF4-208ENST00000452047 LRRC24Q50LG9 513 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms