RNA–Protein interactions for RNA: ENST00000451218.6

USP46-202, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 5 BASIC

Gene USP46, Length 4,622 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-202ENST00000451218 TRIM6-TRIM34B2RNG4 842 aa8.01□□□□□ -1.13
USP46-202ENST00000451218 SSFA2P28290 1259 aa8.01□□□□□ -1.13
USP46-202ENST00000451218 CREB3L3Q68CJ9 461 aa8□□□□□ -1.13
USP46-202ENST00000451218 TICAM2Q86XR7 235 aa8□□□□□ -1.13
USP46-202ENST00000451218 TM6SF1Q9BZW5 370 aa8□□□□□ -1.13
USP46-202ENST00000451218 SRP68Q9UHB9 627 aaKnown RBP8□□□□□ -1.13
USP46-202ENST00000451218 SRCAPQ6ZRS2 3230 aa8□□□□□ -1.13
USP46-202ENST00000451218 MYH2Q9UKX2 1941 aa8□□□□□ -1.13
USP46-202ENST00000451218 CYP21A2P08686 494 aa8□□□□□ -1.13
USP46-202ENST00000451218 AK2P54819 239 aa8□□□□□ -1.13
USP46-202ENST00000451218 CLEC4GQ6UXB4 293 aa8□□□□□ -1.13
USP46-202ENST00000451218 SALL1Q9NSC2 1324 aa8□□□□□ -1.13
USP46-202ENST00000451218 IFIT2P09913 472 aaKnown RBP8□□□□□ -1.13
USP46-202ENST00000451218 HCLS1P14317 486 aaPredicted RBP8□□□□□ -1.13
USP46-202ENST00000451218 ERFEQ4G0M1 354 aa8□□□□□ -1.13
USP46-202ENST00000451218 KIF6Q6ZMV9 814 aa8□□□□□ -1.13
USP46-202ENST00000451218 UPF3BQ9BZI7 483 aaKnown RBP8□□□□□ -1.13
USP46-202ENST00000451218 UPF2Q9HAU5 1272 aaKnown RBP8□□□□□ -1.13
USP46-202ENST00000451218 PIH1D3Q9NQM4 214 aaKnown RBP8□□□□□ -1.13
USP46-202ENST00000451218 DENND2AQ9ULE3 1009 aa8□□□□□ -1.13
USP46-202ENST00000451218 RBM8AQ9Y5S9 174 aaKnown RBP8□□□□□ -1.13
USP46-202ENST00000451218 SF3B3Q15393 1217 aaKnown RBP7.99□□□□□ -1.13
USP46-202ENST00000451218 DCAF8Q5TAQ9 597 aa7.99□□□□□ -1.13
USP46-202ENST00000451218 DDX46Q7L014 1031 aaKnown RBP7.99□□□□□ -1.13
USP46-202ENST00000451218 SYTL4Q96C24 671 aaPredicted RBP7.99□□□□□ -1.13
USP46-202ENST00000451218 ANO2Q9NQ90 1003 aa7.99□□□□□ -1.13
USP46-202ENST00000451218 DTNBO60941 627 aa7.99□□□□□ -1.13
USP46-202ENST00000451218 PDE8BO95263 885 aa7.99□□□□□ -1.13
USP46-202ENST00000451218 MCM4P33991 863 aa7.99□□□□□ -1.13
USP46-202ENST00000451218 CCDC85AQ96PX6 553 aaPredicted RBP7.99□□□□□ -1.13
USP46-202ENST00000451218 TPCN1Q9ULQ1 816 aa7.99□□□□□ -1.13
USP46-202ENST00000451218 CLEC11AQ9Y240 323 aa7.99□□□□□ -1.13
USP46-202ENST00000451218 FSD2A1L4K1 749 aa7.99□□□□□ -1.13
USP46-202ENST00000451218 BRD1O95696 1058 aa7.99□□□□□ -1.13
USP46-202ENST00000451218 KLRK1P26718 216 aa7.99□□□□□ -1.13
USP46-202ENST00000451218 ADGRA1Q86SQ6 560 aa7.99□□□□□ -1.13
USP46-202ENST00000451218 PUS7LQ9H0K6 701 aaKnown RBP7.99□□□□□ -1.13
USP46-202ENST00000451218 PAG1Q9NWQ8 432 aa7.99□□□□□ -1.13
USP46-202ENST00000451218 RPS6KA4O75676 772 aa7.99□□□□□ -1.13
USP46-202ENST00000451218 EXOSC10Q01780 885 aaKnown RBP7.99□□□□□ -1.13
USP46-202ENST00000451218 NGLY1Q96IV0 654 aa7.99□□□□□ -1.13
USP46-202ENST00000451218 CHMP5Q9NZZ3 219 aa7.99□□□□□ -1.13
USP46-202ENST00000451218 NARFQ9UHQ1 456 aa7.99□□□□□ -1.13
USP46-202ENST00000451218 FBXL16Q8N461 479 aa7.98□□□□□ -1.13
USP46-202ENST00000451218 ZAP70P43403 619 aa7.98□□□□□ -1.13
USP46-202ENST00000451218 PHKA1P46020 1223 aa7.98□□□□□ -1.13
USP46-202ENST00000451218 BECN1Q14457 450 aa7.98□□□□□ -1.13
USP46-202ENST00000451218 ME3Q16798 604 aa7.98□□□□□ -1.13
USP46-202ENST00000451218 ARHGEF1Q92888 912 aaKnown RBP7.98□□□□□ -1.13
USP46-202ENST00000451218 NSFL1CQ9UNZ2 370 aaKnown RBP7.98□□□□□ -1.13
USP46-202ENST00000451218 HDAC5Q9UQL6 1122 aa7.98□□□□□ -1.13
USP46-202ENST00000451218 SEPT12Q8IYM1 358 aa7.98□□□□□ -1.13
USP46-202ENST00000451218 INTS4Q96HW7 963 aaKnown RBP7.98□□□□□ -1.13
USP46-202ENST00000451218 SLX4Q8IY92 1834 aa7.98□□□□□ -1.13
USP46-202ENST00000451218 MYH6P13533 1939 aa7.98□□□□□ -1.13
USP46-202ENST00000451218 HSP90AB3PQ58FF7 597 aa7.98□□□□□ -1.13
USP46-202ENST00000451218 CTDNEP1O95476 244 aa7.97□□□□□ -1.13
USP46-202ENST00000451218 BCL11BQ9C0K0 894 aaPredicted RBP7.97□□□□□ -1.13
USP46-202ENST00000451218 HSPD1P10809 573 aaKnown RBP7.97□□□□□ -1.13
USP46-202ENST00000451218 EVCP57679 992 aa7.97□□□□□ -1.13
USP46-202ENST00000451218 PRPF40BQ6NWY9 871 aaKnown RBP7.97□□□□□ -1.13
USP46-202ENST00000451218 HSCBQ8IWL3 235 aa7.97□□□□□ -1.13
USP46-202ENST00000451218 KLRG2A4D1S0 409 aaPredicted RBP7.97□□□□□ -1.13
USP46-202ENST00000451218 SMIM22K7EJ46 135 aa7.97□□□□□ -1.13
USP46-202ENST00000451218 NEK4P51957 841 aa7.97□□□□□ -1.13
USP46-202ENST00000451218 ANTXR2P58335 489 aa7.97□□□□□ -1.13
USP46-202ENST00000451218 RASGRF1Q13972 1273 aa7.97□□□□□ -1.13
USP46-202ENST00000451218 SMARCC1Q92922 1105 aaPredicted RBP7.97□□□□□ -1.13
USP46-202ENST00000451218 LARP6Q9BRS8 491 aaKnown RBP7.97□□□□□ -1.13
USP46-202ENST00000451218 EPB41L4AQ9HCS5 686 aaPredicted RBP7.97□□□□□ -1.13
USP46-202ENST00000451218 LMBRD1Q9NUN5 540 aa7.97□□□□□ -1.13
USP46-202ENST00000451218 TRMT112Q9UI30 125 aaKnown RBP7.97□□□□□ -1.13
USP46-202ENST00000451218 CRY2Q49AN0 593 aa7.96□□□□□ -1.13
USP46-202ENST00000451218 CCDC102BQ68D86 513 aa7.96□□□□□ -1.13
USP46-202ENST00000451218 HOMEZQ8IX15 550 aa7.96□□□□□ -1.13
USP46-202ENST00000451218 CELF1Q92879 486 aaKnown RBP7.96□□□□□ -1.13
USP46-202ENST00000451218 AKT1S1Q96B36 256 aa7.96□□□□□ -1.13
USP46-202ENST00000451218 HMG20BQ9P0W2 317 aa7.96□□□□□ -1.13
USP46-202ENST00000451218 COL4A5P29400 1685 aa7.96□□□□□ -1.13
USP46-202ENST00000451218 GOLIM4O00461 696 aa7.96□□□□□ -1.13
USP46-202ENST00000451218 ADD2P35612 726 aa7.96□□□□□ -1.13
USP46-202ENST00000451218 ZNF827Q17R98 1081 aa7.96□□□□□ -1.14
USP46-202ENST00000451218 PARP10Q53GL7 1025 aa7.96□□□□□ -1.14
USP46-202ENST00000451218 GPT2Q8TD30 523 aa7.96□□□□□ -1.14
USP46-202ENST00000451218 UTP14AQ9BVJ6 771 aaKnown RBP7.96□□□□□ -1.14
USP46-202ENST00000451218 HELLSQ9NRZ9 838 aa7.96□□□□□ -1.14
USP46-202ENST00000451218 RPS6KB1P23443 525 aa7.96□□□□□ -1.14
USP46-202ENST00000451218 IFIT5Q13325 482 aaKnown RBP7.96□□□□□ -1.14
USP46-202ENST00000451218 DSCC1Q9BVC3 393 aa7.96□□□□□ -1.14
USP46-202ENST00000451218 WWC3Q9ULE0 1092 aa7.96□□□□□ -1.14
USP46-202ENST00000451218 MROH5Q6ZUA9 1318 aa7.96□□□□□ -1.14
USP46-202ENST00000451218 NID2Q14112 1375 aa7.96□□□□□ -1.14
USP46-202ENST00000451218 FER1L6Q2WGJ9 1857 aa7.95□□□□□ -1.14
USP46-202ENST00000451218 BAG4O95429 457 aaKnown RBP7.95□□□□□ -1.14
USP46-202ENST00000451218 EVX2Q03828 476 aa7.95□□□□□ -1.14
USP46-202ENST00000451218 MCMDC2Q4G0Z9 681 aa7.95□□□□□ -1.14
USP46-202ENST00000451218 TTLL5Q6EMB2 1281 aa7.95□□□□□ -1.14
USP46-202ENST00000451218 GYS1P13807 737 aa7.95□□□□□ -1.14
USP46-202ENST00000451218 DDR1Q08345 913 aa7.95□□□□□ -1.14
USP46-202ENST00000451218 OS9Q13438 667 aaPredicted RBP7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms