RNA–Protein interactions for RNA: ENST00000451053.2

VPS33A-202, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 3 BASIC

Gene VPS33A, Length 1,154 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-202ENST00000451053 IGHDP01880 384 aa16.09■□□□□ 0.17
VPS33A-202ENST00000451053 DOK7Q18PE1 504 aa16.09■□□□□ 0.17
VPS33A-202ENST00000451053 C15orf52Q6ZUT6 534 aaKnown RBP16.09■□□□□ 0.17
VPS33A-202ENST00000451053 ERC1Q8IUD2 1116 aa16.09■□□□□ 0.17
VPS33A-202ENST00000451053 RHPN1Q8TCX5 695 aa16.09■□□□□ 0.17
VPS33A-202ENST00000451053 VPS33BQ9H267 617 aa16.09■□□□□ 0.17
VPS33A-202ENST00000451053 DICER1Q9UPY3 1922 aaKnown RBP16.09■□□□□ 0.17
VPS33A-202ENST00000451053 RAB11FIP3O75154 756 aa16.08■□□□□ 0.16
VPS33A-202ENST00000451053 SLC5A1P13866 664 aa16.08■□□□□ 0.16
VPS33A-202ENST00000451053 NIM1KQ8IY84 436 aa16.08■□□□□ 0.16
VPS33A-202ENST00000451053 LPIN2Q92539 896 aa16.08■□□□□ 0.16
VPS33A-202ENST00000451053 DBNDD1Q9H9R9 158 aa16.08■□□□□ 0.16
VPS33A-202ENST00000451053 AKAP2Q9Y2D5 859 aa16.08■□□□□ 0.16
VPS33A-202ENST00000451053 ARAP2Q8WZ64 1704 aa16.08■□□□□ 0.16
VPS33A-202ENST00000451053 A0A1B0GUL7 405 aa16.07■□□□□ 0.16
VPS33A-202ENST00000451053 ECE2O60344 883 aa16.07■□□□□ 0.16
VPS33A-202ENST00000451053 IFIT1P09914 478 aaKnown RBP16.07■□□□□ 0.16
VPS33A-202ENST00000451053 ADORA1P30542 326 aa16.07■□□□□ 0.16
VPS33A-202ENST00000451053 GYG1P46976 350 aa16.07■□□□□ 0.16
VPS33A-202ENST00000451053 TIMM10P62072 90 aa16.07■□□□□ 0.16
VPS33A-202ENST00000451053 TNNI3KQ59H18 835 aa16.07■□□□□ 0.16
VPS33A-202ENST00000451053 KIF1BPQ96EK5 621 aa16.07■□□□□ 0.16
VPS33A-202ENST00000451053 RWDD1Q9H446 243 aaPredicted RBP16.07■□□□□ 0.16
VPS33A-202ENST00000451053 IL1RAPL2Q9NP60 686 aa16.07■□□□□ 0.16
VPS33A-202ENST00000451053 FPGT-TNNI3KV9GXZ4 949 aa16.07■□□□□ 0.16
VPS33A-202ENST00000451053 B4GALNT3Q6L9W6 998 aa16.06■□□□□ 0.16
VPS33A-202ENST00000451053 JDP2Q8WYK2 163 aa16.06■□□□□ 0.16
VPS33A-202ENST00000451053 FAM84BQ96KN1 310 aaPredicted RBP16.06■□□□□ 0.16
VPS33A-202ENST00000451053 GPR108Q9NPR9 543 aa16.06■□□□□ 0.16
VPS33A-202ENST00000451053 GOLGB1Q14789 3259 aaKnown RBP16.06■□□□□ 0.16
VPS33A-202ENST00000451053 CHD4Q14839 1912 aa16.06■□□□□ 0.16
VPS33A-202ENST00000451053 YDJCA8MPS7 323 aa16.05■□□□□ 0.16
VPS33A-202ENST00000451053 G3V3G9 751 aa16.05■□□□□ 0.16
VPS33A-202ENST00000451053 SMARCA5O60264 1052 aaPredicted RBP16.05■□□□□ 0.16
VPS33A-202ENST00000451053 DCAF8Q5TAQ9 597 aa16.05■□□□□ 0.16
VPS33A-202ENST00000451053 ZNF804AQ7Z570 1209 aa16.05■□□□□ 0.16
VPS33A-202ENST00000451053 EAF2Q96CJ1 260 aaPredicted RBP16.05■□□□□ 0.16
VPS33A-202ENST00000451053 XAGE2Q96GT9 111 aa16.05■□□□□ 0.16
VPS33A-202ENST00000451053 NEUROD6Q96NK8 337 aa16.05■□□□□ 0.16
VPS33A-202ENST00000451053 LRRCC1Q9C099 1032 aa16.05■□□□□ 0.16
VPS33A-202ENST00000451053 COA1Q9GZY4 146 aa16.05■□□□□ 0.16
VPS33A-202ENST00000451053 BCL11AQ9H165 835 aa16.05■□□□□ 0.16
VPS33A-202ENST00000451053 ZNRF3Q9ULT6 936 aa16.05■□□□□ 0.16
VPS33A-202ENST00000451053 ZNF541Q9H0D2 1346 aa16.04■□□□□ 0.16
VPS33A-202ENST00000451053 FZD9O00144 591 aa16.04■□□□□ 0.16
VPS33A-202ENST00000451053 HIBADHP31937 336 aaKnown RBP16.04■□□□□ 0.16
VPS33A-202ENST00000451053 BCAMP50895 628 aa16.04■□□□□ 0.16
VPS33A-202ENST00000451053 CENPQQ7L2Z9 268 aaPredicted RBP16.04■□□□□ 0.16
VPS33A-202ENST00000451053 FBXO33Q7Z6M2 555 aa16.04■□□□□ 0.16
VPS33A-202ENST00000451053 AACSQ86V21 672 aa16.04■□□□□ 0.16
VPS33A-202ENST00000451053 GCC1Q96CN9 775 aa16.04■□□□□ 0.16
VPS33A-202ENST00000451053 CCDC8Q9H0W5 538 aaPredicted RBP16.04■□□□□ 0.16
VPS33A-202ENST00000451053 KCNQ5Q9NR82 932 aa16.04■□□□□ 0.16
VPS33A-202ENST00000451053 TLR7Q9NYK1 1049 aaKnown RBP16.04■□□□□ 0.16
VPS33A-202ENST00000451053 CAVIN4Q5BKX8 364 aa16.03■□□□□ 0.16
VPS33A-202ENST00000451053 SMC5Q8IY18 1101 aa16.03■□□□□ 0.16
VPS33A-202ENST00000451053 DBNDD2Q9BQY9 259 aa16.03■□□□□ 0.16
VPS33A-202ENST00000451053 CD209Q9NNX6 404 aa16.03■□□□□ 0.16
VPS33A-202ENST00000451053 SCN9AQ15858 1988 aa16.03■□□□□ 0.16
VPS33A-202ENST00000451053 RAD17O75943 681 aa16.02■□□□□ 0.16
VPS33A-202ENST00000451053 IL1R1P14778 569 aa16.02■□□□□ 0.16
VPS33A-202ENST00000451053 PHKA1P46020 1223 aa16.02■□□□□ 0.16
VPS33A-202ENST00000451053 PODNQ7Z5L7 613 aa16.02■□□□□ 0.16
VPS33A-202ENST00000451053 VPS37DQ86XT2 251 aa16.02■□□□□ 0.16
VPS33A-202ENST00000451053 CLASRPQ8N2M8 674 aaKnown RBP16.02■□□□□ 0.16
VPS33A-202ENST00000451053 DBNLQ9UJU6 430 aaKnown RBP16.02■□□□□ 0.16
VPS33A-202ENST00000451053 IQSEC3Q9UPP2 1182 aaPredicted RBP16.02■□□□□ 0.16
VPS33A-202ENST00000451053 ZC3H4Q9UPT8 1303 aaKnown RBP16.01■□□□□ 0.15
VPS33A-202ENST00000451053 EIF6P56537 245 aaKnown RBP16.01■□□□□ 0.15
VPS33A-202ENST00000451053 CXCL9Q07325 125 aa16.01■□□□□ 0.15
VPS33A-202ENST00000451053 ANKRD45Q5TZF3 282 aa16.01■□□□□ 0.15
VPS33A-202ENST00000451053 CCDC102BQ68D86 513 aa16.01■□□□□ 0.15
VPS33A-202ENST00000451053 TDRD7Q8NHU6 1098 aaKnown RBP16.01■□□□□ 0.15
VPS33A-202ENST00000451053 COL1A1P02452 1464 aaPredicted RBP16■□□□□ 0.15
VPS33A-202ENST00000451053 GORABQ5T7V8 394 aa16■□□□□ 0.15
VPS33A-202ENST00000451053 CIAPIN1Q6FI81 312 aa16■□□□□ 0.15
VPS33A-202ENST00000451053 ZNF646O15015 1829 aaPredicted RBP16■□□□□ 0.15
VPS33A-202ENST00000451053 KDM2BQ8NHM5 1336 aa15.99■□□□□ 0.15
VPS33A-202ENST00000451053 PSME4Q14997 1843 aa15.99■□□□□ 0.15
VPS33A-202ENST00000451053 PSMD14O00487 310 aa15.99■□□□□ 0.15
VPS33A-202ENST00000451053 IFIT2P09913 472 aaKnown RBP15.99■□□□□ 0.15
VPS33A-202ENST00000451053 FBXW7Q969H0 707 aa15.99■□□□□ 0.15
VPS33A-202ENST00000451053 JAG2Q9Y219 1238 aa15.99■□□□□ 0.15
VPS33A-202ENST00000451053 USP17L3A6NCW0 530 aa15.98■□□□□ 0.15
VPS33A-202ENST00000451053 USP17L4A6NCW7 530 aa15.98■□□□□ 0.15
VPS33A-202ENST00000451053 DDNO94850 711 aaPredicted RBP15.98■□□□□ 0.15
VPS33A-202ENST00000451053 GTF2IP78347 998 aa15.98■□□□□ 0.15
VPS33A-202ENST00000451053 USP17L1Q7RTZ2 530 aa15.98■□□□□ 0.15
VPS33A-202ENST00000451053 C16orf71Q8IYS4 520 aaPredicted RBP15.98■□□□□ 0.15
VPS33A-202ENST00000451053 GNL3LQ9NVN8 582 aaKnown RBP15.98■□□□□ 0.15
VPS33A-202ENST00000451053 GJA3Q9Y6H8 435 aa15.98■□□□□ 0.15
VPS33A-202ENST00000451053 GLTPD2A6NH11 291 aa15.97■□□□□ 0.15
VPS33A-202ENST00000451053 FRAT2O75474 233 aaPredicted RBP15.97■□□□□ 0.15
VPS33A-202ENST00000451053 VIL1P09327 827 aaKnown RBP15.97■□□□□ 0.15
VPS33A-202ENST00000451053 ARID4AP29374 1257 aaPredicted RBP15.97■□□□□ 0.15
VPS33A-202ENST00000451053 NUCB1Q02818 461 aa15.97■□□□□ 0.15
VPS33A-202ENST00000451053 CHAF1AQ13111 956 aaPredicted RBP15.97■□□□□ 0.15
VPS33A-202ENST00000451053 RASGRF1Q13972 1273 aa15.97■□□□□ 0.15
VPS33A-202ENST00000451053 SCARF1Q14162 830 aa15.97■□□□□ 0.15
VPS33A-202ENST00000451053 TNIP1Q15025 636 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms