RNA–Protein interactions for RNA: ENST00000450364.3

SMARCD2-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 5

Gene SMARCD2, Length 993 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-204ENST00000450364 ALDH1L2Q3SY69 923 aa17.35■□□□□ 0.37
SMARCD2-204ENST00000450364 DACT2Q5SW24 774 aa17.35■□□□□ 0.37
SMARCD2-204ENST00000450364 RBM26Q5T8P6 1007 aaKnown RBP17.35■□□□□ 0.37
SMARCD2-204ENST00000450364 PODNQ7Z5L7 613 aa17.35■□□□□ 0.37
SMARCD2-204ENST00000450364 MPHOSPH8Q99549 860 aa17.35■□□□□ 0.37
SMARCD2-204ENST00000450364 CHMP3Q9Y3E7 222 aa17.35■□□□□ 0.37
SMARCD2-204ENST00000450364 USP17L3A6NCW0 530 aa17.34■□□□□ 0.37
SMARCD2-204ENST00000450364 USP17L4A6NCW7 530 aa17.34■□□□□ 0.37
SMARCD2-204ENST00000450364 RABL6Q3YEC7 729 aaPredicted RBP17.34■□□□□ 0.37
SMARCD2-204ENST00000450364 USP17L1Q7RTZ2 530 aa17.34■□□□□ 0.37
SMARCD2-204ENST00000450364 PUS3Q9BZE2 481 aaKnown RBP17.34■□□□□ 0.37
SMARCD2-204ENST00000450364 ANKRD2Q9GZV1 360 aa17.34■□□□□ 0.37
SMARCD2-204ENST00000450364 USP44Q9H0E7 712 aa17.34■□□□□ 0.37
SMARCD2-204ENST00000450364 BICC1Q9H694 974 aaKnown RBP17.34■□□□□ 0.37
SMARCD2-204ENST00000450364 G3V3G9 751 aa17.33■□□□□ 0.36
SMARCD2-204ENST00000450364 KIF4BQ2VIQ3 1234 aa17.33■□□□□ 0.36
SMARCD2-204ENST00000450364 DCAF8Q5TAQ9 597 aa17.33■□□□□ 0.36
SMARCD2-204ENST00000450364 USP48Q86UV5 1035 aa17.33■□□□□ 0.36
SMARCD2-204ENST00000450364 AGBL3Q8NEM8 1001 aa17.33■□□□□ 0.36
SMARCD2-204ENST00000450364 TLL2Q9Y6L7 1015 aa17.33■□□□□ 0.36
SMARCD2-204ENST00000450364 ADM5C9JUS6 153 aa17.32■□□□□ 0.36
SMARCD2-204ENST00000450364 CELF2O95319 508 aaKnown RBP17.32■□□□□ 0.36
SMARCD2-204ENST00000450364 DEFB115Q30KQ5 88 aa17.32■□□□□ 0.36
SMARCD2-204ENST00000450364 COL13A1Q5TAT6 717 aaPredicted RBP17.32■□□□□ 0.36
SMARCD2-204ENST00000450364 C15orf52Q6ZUT6 534 aaKnown RBP17.32■□□□□ 0.36
SMARCD2-204ENST00000450364 COA1Q9GZY4 146 aa17.32■□□□□ 0.36
SMARCD2-204ENST00000450364 SMC4Q9NTJ3 1288 aa17.32■□□□□ 0.36
SMARCD2-204ENST00000450364 ABT1Q9ULW3 272 aaKnown RBP17.32■□□□□ 0.36
SMARCD2-204ENST00000450364 CCDC57Q2TAC2 916 aa17.31■□□□□ 0.36
SMARCD2-204ENST00000450364 CDC37L1Q7L3B6 337 aa17.31■□□□□ 0.36
SMARCD2-204ENST00000450364 NOB1Q9ULX3 412 aaKnown RBP17.31■□□□□ 0.36
SMARCD2-204ENST00000450364 WDR33Q9C0J8 1336 aaKnown RBP17.3■□□□□ 0.36
SMARCD2-204ENST00000450364 RARSP54136 660 aaKnown RBP17.3■□□□□ 0.36
SMARCD2-204ENST00000450364 BRPF1P55201 1214 aaPredicted RBP17.3■□□□□ 0.36
SMARCD2-204ENST00000450364 STRIP1Q5VSL9 837 aa17.3■□□□□ 0.36
SMARCD2-204ENST00000450364 DIEXFQ68CQ4 756 aaKnown RBP17.3■□□□□ 0.36
SMARCD2-204ENST00000450364 CYP4F22Q6NT55 531 aa17.3■□□□□ 0.36
SMARCD2-204ENST00000450364 LDHAL6AQ6ZMR3 332 aa17.3■□□□□ 0.36
SMARCD2-204ENST00000450364 SAPCD2Q86UD0 394 aa17.3■□□□□ 0.36
SMARCD2-204ENST00000450364 CD209Q9NNX6 404 aa17.3■□□□□ 0.36
SMARCD2-204ENST00000450364 GGA3Q9NZ52 723 aa17.3■□□□□ 0.36
SMARCD2-204ENST00000450364 RIPOR2Q9Y4F9 1068 aa17.3■□□□□ 0.36
SMARCD2-204ENST00000450364 USP17L8P0C7I0 530 aa17.29■□□□□ 0.36
SMARCD2-204ENST00000450364 SCARF1Q14162 830 aa17.29■□□□□ 0.36
SMARCD2-204ENST00000450364 KRT26Q7Z3Y9 468 aa17.29■□□□□ 0.36
SMARCD2-204ENST00000450364 CERS5Q8N5B7 392 aa17.29■□□□□ 0.36
SMARCD2-204ENST00000450364 MYOZ2Q9NPC6 264 aa17.29■□□□□ 0.36
SMARCD2-204ENST00000450364 SCAF8Q9UPN6 1271 aaKnown RBP17.29■□□□□ 0.36
SMARCD2-204ENST00000450364 FOXN1O15353 648 aa17.28■□□□□ 0.36
SMARCD2-204ENST00000450364 CT47B1P0C2W7 299 aaPredicted RBP17.28■□□□□ 0.36
SMARCD2-204ENST00000450364 GTF2IP78347 998 aa17.28■□□□□ 0.36
SMARCD2-204ENST00000450364 LRRC24Q50LG9 513 aa17.28■□□□□ 0.36
SMARCD2-204ENST00000450364 KLHDC4Q8TBB5 520 aa17.28■□□□□ 0.36
SMARCD2-204ENST00000450364 ZNF408Q9H9D4 720 aa17.28■□□□□ 0.36
SMARCD2-204ENST00000450364 PLIN1O60240 522 aa17.27■□□□□ 0.36
SMARCD2-204ENST00000450364 IL1R1P14778 569 aa17.27■□□□□ 0.36
SMARCD2-204ENST00000450364 KCNJ4P48050 445 aa17.27■□□□□ 0.36
SMARCD2-204ENST00000450364 RFX5P48382 616 aaPredicted RBP17.27■□□□□ 0.36
SMARCD2-204ENST00000450364 NBPF9Q3BBW0 867 aa17.27■□□□□ 0.36
SMARCD2-204ENST00000450364 ANGEL2Q5VTE6 544 aaKnown RBP17.27■□□□□ 0.36
SMARCD2-204ENST00000450364 TTLL5Q6EMB2 1281 aa17.27■□□□□ 0.36
SMARCD2-204ENST00000450364 FBXW7Q969H0 707 aa17.27■□□□□ 0.36
SMARCD2-204ENST00000450364 CAPNS2Q96L46 248 aa17.27■□□□□ 0.36
SMARCD2-204ENST00000450364 CNNM1Q9NRU3 951 aa17.27■□□□□ 0.36
SMARCD2-204ENST00000450364 WBP1LQ9NX94 342 aa17.27■□□□□ 0.36
SMARCD2-204ENST00000450364 TNNQ9UQP3 1299 aa17.27■□□□□ 0.36
SMARCD2-204ENST00000450364 AOC2O75106 756 aa17.26■□□□□ 0.35
SMARCD2-204ENST00000450364 TAF7LQ5H9L4 462 aa17.26■□□□□ 0.35
SMARCD2-204ENST00000450364 IFFO2Q5TF58 517 aa17.26■□□□□ 0.35
SMARCD2-204ENST00000450364 VGLL2Q8N8G2 317 aa17.26■□□□□ 0.35
SMARCD2-204ENST00000450364 ZBED3Q96IU2 234 aaPredicted RBP17.26■□□□□ 0.35
SMARCD2-204ENST00000450364 PCDHAC2Q9Y5I4 1007 aa17.26■□□□□ 0.35
SMARCD2-204ENST00000450364 DCPSQ96C86 337 aaKnown RBP17.25■□□□□ 0.35
SMARCD2-204ENST00000450364 JAG2Q9Y219 1238 aa17.25■□□□□ 0.35
SMARCD2-204ENST00000450364 AOX1Q06278 1338 aa17.24■□□□□ 0.35
SMARCD2-204ENST00000450364 WNT10BO00744 389 aa17.24■□□□□ 0.35
SMARCD2-204ENST00000450364 SASH1O94885 1247 aa17.24■□□□□ 0.35
SMARCD2-204ENST00000450364 GYG1P46976 350 aa17.24■□□□□ 0.35
SMARCD2-204ENST00000450364 KIAA0825Q8IV33 1275 aa17.24■□□□□ 0.35
SMARCD2-204ENST00000450364 CDCA5Q96FF9 252 aa17.24■□□□□ 0.35
SMARCD2-204ENST00000450364 ZIC5Q96T25 663 aa17.24■□□□□ 0.35
SMARCD2-204ENST00000450364 ARAP2Q8WZ64 1704 aa17.24■□□□□ 0.35
SMARCD2-204ENST00000450364 MYO3BQ8WXR4 1341 aa17.23■□□□□ 0.35
SMARCD2-204ENST00000450364 BCAR3O75815 825 aa17.23■□□□□ 0.35
SMARCD2-204ENST00000450364 UBE4AQ14139 1066 aa17.23■□□□□ 0.35
SMARCD2-204ENST00000450364 HHIPL1Q96JK4 782 aa17.23■□□□□ 0.35
SMARCD2-204ENST00000450364 FAM84BQ96KN1 310 aaPredicted RBP17.23■□□□□ 0.35
SMARCD2-204ENST00000450364 PITPNM2Q9BZ72 1349 aa17.22■□□□□ 0.35
SMARCD2-204ENST00000450364 PTPN12Q05209 780 aaKnown RBP17.22■□□□□ 0.35
SMARCD2-204ENST00000450364 GRM1Q13255 1194 aa17.22■□□□□ 0.35
SMARCD2-204ENST00000450364 PRAMEF18Q5VWM3 479 aa17.22■□□□□ 0.35
SMARCD2-204ENST00000450364 ZNF804AQ7Z570 1209 aa17.22■□□□□ 0.35
SMARCD2-204ENST00000450364 TDRD7Q8NHU6 1098 aaKnown RBP17.22■□□□□ 0.35
SMARCD2-204ENST00000450364 MEIS3Q99687 375 aa17.22■□□□□ 0.35
SMARCD2-204ENST00000450364 MROH5Q6ZUA9 1318 aa17.21■□□□□ 0.35
SMARCD2-204ENST00000450364 ECM29Q5VYK3 1845 aa17.21■□□□□ 0.35
SMARCD2-204ENST00000450364 FAM155AB1AL88 458 aaPredicted RBP17.21■□□□□ 0.35
SMARCD2-204ENST00000450364 PAXIP1Q6ZW49 1069 aaPredicted RBP17.21■□□□□ 0.35
SMARCD2-204ENST00000450364 ATG9AQ7Z3C6 839 aa17.21■□□□□ 0.35
SMARCD2-204ENST00000450364 SULF1Q8IWU6 871 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms