RNA–Protein interactions for RNA: ENST00000449159.5

SMPD4-211, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 635 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-211ENST00000449159 CHMP4BQ9H444 224 aaKnown RBP13.22□□□□□ -0.29
SMPD4-211ENST00000449159 MED23Q9ULK4 1368 aa13.21□□□□□ -0.29
SMPD4-211ENST00000449159 IRS2Q9Y4H2 1338 aa13.21□□□□□ -0.29
SMPD4-211ENST00000449159 CIAO1O76071 339 aa13.21□□□□□ -0.29
SMPD4-211ENST00000449159 KCNJ4P48050 445 aa13.21□□□□□ -0.29
SMPD4-211ENST00000449159 DPY19L2Q6NUT2 758 aa13.21□□□□□ -0.29
SMPD4-211ENST00000449159 LEMD3Q9Y2U8 911 aa13.21□□□□□ -0.29
SMPD4-211ENST00000449159 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.21□□□□□ -0.29
SMPD4-211ENST00000449159 ZNF541Q9H0D2 1346 aa13.2□□□□□ -0.3
SMPD4-211ENST00000449159 MYH13Q9UKX3 1938 aa13.2□□□□□ -0.3
SMPD4-211ENST00000449159 CAPN15O75808 1086 aa13.2□□□□□ -0.3
SMPD4-211ENST00000449159 PDE8BO95263 885 aa13.2□□□□□ -0.3
SMPD4-211ENST00000449159 HSPA1AP0DMV8 641 aaKnown RBP13.2□□□□□ -0.3
SMPD4-211ENST00000449159 HSPA1BP0DMV9 641 aaKnown RBP13.2□□□□□ -0.3
SMPD4-211ENST00000449159 IL15P40933 162 aaPredicted RBP13.2□□□□□ -0.3
SMPD4-211ENST00000449159 DOK7Q18PE1 504 aa13.2□□□□□ -0.3
SMPD4-211ENST00000449159 EYA3Q99504 573 aa13.2□□□□□ -0.3
SMPD4-211ENST00000449159 DBNDD1Q9H9R9 158 aa13.2□□□□□ -0.3
SMPD4-211ENST00000449159 FBXO3Q9UK99 471 aa13.2□□□□□ -0.3
SMPD4-211ENST00000449159 PCDHB15Q9Y5E8 787 aa13.2□□□□□ -0.3
SMPD4-211ENST00000449159 YDJCA8MPS7 323 aa13.19□□□□□ -0.3
SMPD4-211ENST00000449159 SURF6O75683 361 aaKnown RBP13.19□□□□□ -0.3
SMPD4-211ENST00000449159 TFCP2Q12800 502 aa13.19□□□□□ -0.3
SMPD4-211ENST00000449159 RPAP2Q8IXW5 612 aaPredicted RBP13.19□□□□□ -0.3
SMPD4-211ENST00000449159 NIM1KQ8IY84 436 aa13.19□□□□□ -0.3
SMPD4-211ENST00000449159 JDP2Q8WYK2 163 aa13.19□□□□□ -0.3
SMPD4-211ENST00000449159 ZC3H12CQ9C0D7 883 aaKnown RBP13.19□□□□□ -0.3
SMPD4-211ENST00000449159 VPS33BQ9H267 617 aa13.19□□□□□ -0.3
SMPD4-211ENST00000449159 FZD9O00144 591 aa13.18□□□□□ -0.3
SMPD4-211ENST00000449159 ECE2O60344 883 aa13.18□□□□□ -0.3
SMPD4-211ENST00000449159 SASH1O94885 1247 aa13.18□□□□□ -0.3
SMPD4-211ENST00000449159 FGFR2P21802 821 aa13.18□□□□□ -0.3
SMPD4-211ENST00000449159 G3BP1Q13283 466 aaKnown RBP eCLIP13.18□□□□□ -0.3
SMPD4-211ENST00000449159 KCNQ5Q9NR82 932 aa13.18□□□□□ -0.3
SMPD4-211ENST00000449159 EXOC6BQ9Y2D4 811 aa13.18□□□□□ -0.3
SMPD4-211ENST00000449159 THSD7BQ9C0I4 1608 aa13.17□□□□□ -0.3
SMPD4-211ENST00000449159 ZNF609O15014 1411 aa13.17□□□□□ -0.3
SMPD4-211ENST00000449159 POTECB2RU33 542 aa13.17□□□□□ -0.3
SMPD4-211ENST00000449159 HMMRO75330 724 aa13.17□□□□□ -0.3
SMPD4-211ENST00000449159 OS9Q13438 667 aaPredicted RBP13.17□□□□□ -0.3
SMPD4-211ENST00000449159 UBE4AQ14139 1066 aa13.17□□□□□ -0.3
SMPD4-211ENST00000449159 PUM3Q15397 648 aaKnown RBP13.17□□□□□ -0.3
SMPD4-211ENST00000449159 CEP126Q9P2H0 1117 aa13.17□□□□□ -0.3
SMPD4-211ENST00000449159 ZNRF3Q9ULT6 936 aa13.17□□□□□ -0.3
SMPD4-211ENST00000449159 NOP58Q9Y2X3 529 aaKnown RBP13.17□□□□□ -0.3
SMPD4-211ENST00000449159 CENPBP07199 599 aaPredicted RBP13.16□□□□□ -0.3
SMPD4-211ENST00000449159 GYG1P46976 350 aa13.16□□□□□ -0.3
SMPD4-211ENST00000449159 CXCL9Q07325 125 aa13.16□□□□□ -0.3
SMPD4-211ENST00000449159 ATP2B3Q16720 1220 aa13.16□□□□□ -0.3
SMPD4-211ENST00000449159 CHADLQ6NUI6 762 aa13.16□□□□□ -0.3
SMPD4-211ENST00000449159 C15orf52Q6ZUT6 534 aaKnown RBP13.16□□□□□ -0.3
SMPD4-211ENST00000449159 CREBZFQ9NS37 354 aa13.16□□□□□ -0.3
SMPD4-211ENST00000449159 IQCA1LA6NCM1 817 aa13.15□□□□□ -0.3
SMPD4-211ENST00000449159 APBB1O00213 710 aa13.15□□□□□ -0.3
SMPD4-211ENST00000449159 RAD17O75943 681 aa13.15□□□□□ -0.3
SMPD4-211ENST00000449159 DDNO94850 711 aaPredicted RBP13.15□□□□□ -0.3
SMPD4-211ENST00000449159 ADORA1P30542 326 aa13.15□□□□□ -0.3
SMPD4-211ENST00000449159 FAM84BQ96KN1 310 aaPredicted RBP13.15□□□□□ -0.3
SMPD4-211ENST00000449159 TRPM7Q96QT4 1865 aa13.14□□□□□ -0.31
SMPD4-211ENST00000449159 G3V3G9 751 aa13.14□□□□□ -0.31
SMPD4-211ENST00000449159 SLC5A1P13866 664 aa13.14□□□□□ -0.31
SMPD4-211ENST00000449159 EIF6P56537 245 aaKnown RBP13.14□□□□□ -0.31
SMPD4-211ENST00000449159 TIMM10P62072 90 aa13.14□□□□□ -0.31
SMPD4-211ENST00000449159 DCAF8Q5TAQ9 597 aa13.14□□□□□ -0.31
SMPD4-211ENST00000449159 ZNF804AQ7Z570 1209 aa13.14□□□□□ -0.31
SMPD4-211ENST00000449159 LPIN2Q92539 896 aa13.14□□□□□ -0.31
SMPD4-211ENST00000449159 COA1Q9GZY4 146 aa13.14□□□□□ -0.31
SMPD4-211ENST00000449159 GJA3Q9Y6H8 435 aa13.14□□□□□ -0.31
SMPD4-211ENST00000449159 CNTNAP1P78357 1384 aa13.14□□□□□ -0.31
SMPD4-211ENST00000449159 A0A1B0GUL7 405 aa13.13□□□□□ -0.31
SMPD4-211ENST00000449159 PSMD14O00487 310 aa13.13□□□□□ -0.31
SMPD4-211ENST00000449159 IFIT1P09914 478 aaKnown RBP13.13□□□□□ -0.31
SMPD4-211ENST00000449159 BCAMP50895 628 aa13.13□□□□□ -0.31
SMPD4-211ENST00000449159 CD209Q9NNX6 404 aa13.13□□□□□ -0.31
SMPD4-211ENST00000449159 MKRN1Q9UHC7 482 aaKnown RBP13.13□□□□□ -0.31
SMPD4-211ENST00000449159 IQSEC3Q9UPP2 1182 aaPredicted RBP13.13□□□□□ -0.31
SMPD4-211ENST00000449159 JAG2Q9Y219 1238 aa13.13□□□□□ -0.31
SMPD4-211ENST00000449159 COL1A1P02452 1464 aaPredicted RBP13.12□□□□□ -0.31
SMPD4-211ENST00000449159 POTEIP0CG38 1075 aa13.12□□□□□ -0.31
SMPD4-211ENST00000449159 POTEJP0CG39 1038 aa13.12□□□□□ -0.31
SMPD4-211ENST00000449159 IL1R1P14778 569 aa13.12□□□□□ -0.31
SMPD4-211ENST00000449159 HIBADHP31937 336 aaKnown RBP13.12□□□□□ -0.31
SMPD4-211ENST00000449159 AAMPQ13685 434 aa13.12□□□□□ -0.31
SMPD4-211ENST00000449159 TNNI3KQ59H18 835 aa13.12□□□□□ -0.31
SMPD4-211ENST00000449159 CIAPIN1Q6FI81 312 aa13.12□□□□□ -0.31
SMPD4-211ENST00000449159 PODNQ7Z5L7 613 aa13.12□□□□□ -0.31
SMPD4-211ENST00000449159 FBXO33Q7Z6M2 555 aa13.12□□□□□ -0.31
SMPD4-211ENST00000449159 LDHDQ86WU2 507 aa13.12□□□□□ -0.31
SMPD4-211ENST00000449159 ERC1Q8IUD2 1116 aa13.12□□□□□ -0.31
SMPD4-211ENST00000449159 GPC2Q8N158 579 aa13.12□□□□□ -0.31
SMPD4-211ENST00000449159 RHPN1Q8TCX5 695 aa13.12□□□□□ -0.31
SMPD4-211ENST00000449159 FBXW7Q969H0 707 aa13.12□□□□□ -0.31
SMPD4-211ENST00000449159 L3MBTL3Q96JM7 780 aaPredicted RBP13.12□□□□□ -0.31
SMPD4-211ENST00000449159 NEUROD6Q96NK8 337 aa13.12□□□□□ -0.31
SMPD4-211ENST00000449159 MXD3Q9BW11 206 aa13.12□□□□□ -0.31
SMPD4-211ENST00000449159 IL1RAPL2Q9NP60 686 aa13.12□□□□□ -0.31
SMPD4-211ENST00000449159 AKAP2Q9Y2D5 859 aa13.12□□□□□ -0.31
SMPD4-211ENST00000449159 FPGT-TNNI3KV9GXZ4 949 aa13.12□□□□□ -0.31
SMPD4-211ENST00000449159 AKAP11Q9UKA4 1901 aa13.11□□□□□ -0.31
SMPD4-211ENST00000449159 PHKA1P46020 1223 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms