RNA–Protein interactions for RNA: ENST00000448748.1

LINC00349-201, long intergenic non-protein coding RNA 349, humanhuman

TSL 5 BASIC

Gene LINC00349, Length 841 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00349-201ENST00000448748 FKBP5Q13451 457 aaPredicted RBP10.25□□□□□ -0.77
LINC00349-201ENST00000448748 ANKLE2Q86XL3 938 aa10.25□□□□□ -0.77
LINC00349-201ENST00000448748 GOLGA6L1Q8N7Z2 621 aa10.25□□□□□ -0.77
LINC00349-201ENST00000448748 VTI1AQ96AJ9 217 aa10.25□□□□□ -0.77
LINC00349-201ENST00000448748 CEP63Q96MT8 703 aa10.25□□□□□ -0.77
LINC00349-201ENST00000448748 QTRT2Q9H974 415 aaKnown RBP10.25□□□□□ -0.77
LINC00349-201ENST00000448748 LRRC4BQ9NT99 713 aa10.25□□□□□ -0.77
LINC00349-201ENST00000448748 KIF1BO60333 1816 aa10.25□□□□□ -0.77
LINC00349-201ENST00000448748 XIRP1Q702N8 1843 aaKnown RBP10.25□□□□□ -0.77
LINC00349-201ENST00000448748 NRXN3Q9Y4C0 1643 aa10.25□□□□□ -0.77
LINC00349-201ENST00000448748 DIP2AQ14689 1571 aa10.24□□□□□ -0.77
LINC00349-201ENST00000448748 SHISA8B8ZZ34 492 aa10.24□□□□□ -0.77
LINC00349-201ENST00000448748 ARAFP10398 606 aa10.24□□□□□ -0.77
LINC00349-201ENST00000448748 TYRO3Q06418 890 aa10.24□□□□□ -0.77
LINC00349-201ENST00000448748 OCLNQ16625 522 aa10.24□□□□□ -0.77
LINC00349-201ENST00000448748 GALNT6Q8NCL4 622 aa10.24□□□□□ -0.77
LINC00349-201ENST00000448748 NEDD1Q8NHV4 660 aa10.24□□□□□ -0.77
LINC00349-201ENST00000448748 BRD7Q9NPI1 651 aa10.24□□□□□ -0.77
LINC00349-201ENST00000448748 BCS1LQ9Y276 419 aa10.24□□□□□ -0.77
LINC00349-201ENST00000448748 DNMT3AQ9Y6K1 912 aaPredicted RBP10.24□□□□□ -0.77
LINC00349-201ENST00000448748 NEXMIFQ5QGS0 1516 aa10.23□□□□□ -0.77
LINC00349-201ENST00000448748 SETBP1Q9Y6X0 1596 aa10.23□□□□□ -0.77
LINC00349-201ENST00000448748 ALKQ9UM73 1620 aa10.23□□□□□ -0.77
LINC00349-201ENST00000448748 NEURL1BA8MQ27 555 aa10.23□□□□□ -0.77
LINC00349-201ENST00000448748 MARSP56192 900 aaKnown RBP10.23□□□□□ -0.77
LINC00349-201ENST00000448748 SLCO4C1Q6ZQN7 724 aa10.23□□□□□ -0.77
LINC00349-201ENST00000448748 EDARADDQ8WWZ3 215 aa10.23□□□□□ -0.77
LINC00349-201ENST00000448748 KLK14Q9P0G3 267 aa10.23□□□□□ -0.77
LINC00349-201ENST00000448748 KLF15Q9UIH9 416 aa10.23□□□□□ -0.77
LINC00349-201ENST00000448748 IFT172Q9UG01 1749 aa10.23□□□□□ -0.77
LINC00349-201ENST00000448748 ZNF335Q9H4Z2 1342 aaPredicted RBP10.23□□□□□ -0.77
LINC00349-201ENST00000448748 SETD5Q9C0A6 1442 aa10.23□□□□□ -0.77
LINC00349-201ENST00000448748 SETD1AO15047 1707 aaKnown RBP10.22□□□□□ -0.77
LINC00349-201ENST00000448748 CHD2O14647 1828 aaKnown RBP10.22□□□□□ -0.77
LINC00349-201ENST00000448748 HIF1AQ16665 826 aa10.22□□□□□ -0.77
LINC00349-201ENST00000448748 BTLAQ7Z6A9 289 aa10.22□□□□□ -0.77
LINC00349-201ENST00000448748 PRR12Q9ULL5 1215 aa10.22□□□□□ -0.77
LINC00349-201ENST00000448748 PLEKHG1Q9ULL1 1385 aa10.22□□□□□ -0.77
LINC00349-201ENST00000448748 RIMS2Q9UQ26 1411 aa10.22□□□□□ -0.77
LINC00349-201ENST00000448748 PPLO60437 1756 aa10.21□□□□□ -0.77
LINC00349-201ENST00000448748 PCBP4P57723 403 aaKnown RBP10.21□□□□□ -0.77
LINC00349-201ENST00000448748 DGKZQ13574 1117 aa10.21□□□□□ -0.77
LINC00349-201ENST00000448748 ZNF468Q5VIY5 522 aaPredicted RBP10.21□□□□□ -0.77
LINC00349-201ENST00000448748 FBXO41Q8TF61 875 aa10.21□□□□□ -0.77
LINC00349-201ENST00000448748 SLC30A3Q99726 388 aa10.21□□□□□ -0.77
LINC00349-201ENST00000448748 TIMELESSQ9UNS1 1208 aa10.21□□□□□ -0.77
LINC00349-201ENST00000448748 TGFBR3LH3BV60 316 aa10.2□□□□□ -0.78
LINC00349-201ENST00000448748 ADH6P28332 368 aa10.2□□□□□ -0.78
LINC00349-201ENST00000448748 IER5Q5VY09 327 aa10.2□□□□□ -0.78
LINC00349-201ENST00000448748 ADAMTS13Q76LX8 1427 aa10.2□□□□□ -0.78
LINC00349-201ENST00000448748 ERICH6Q7L0X2 663 aa10.2□□□□□ -0.78
LINC00349-201ENST00000448748 FCHSD1Q86WN1 690 aa10.2□□□□□ -0.78
LINC00349-201ENST00000448748 MYO19Q96H55 970 aa10.2□□□□□ -0.78
LINC00349-201ENST00000448748 LRRC7Q96NW7 1537 aa10.2□□□□□ -0.78
LINC00349-201ENST00000448748 RAB3GAP2Q9H2M9 1393 aa10.2□□□□□ -0.78
LINC00349-201ENST00000448748 AVENQ9NQS1 362 aaPredicted RBP10.2□□□□□ -0.78
LINC00349-201ENST00000448748 CXXC1Q9P0U4 656 aaPredicted RBP10.2□□□□□ -0.78
LINC00349-201ENST00000448748 SLAIN2Q9P270 581 aa10.2□□□□□ -0.78
LINC00349-201ENST00000448748 DMGDHQ9UI17 866 aaKnown RBP10.2□□□□□ -0.78
LINC00349-201ENST00000448748 NKTRP30414 1462 aaKnown RBP10.19□□□□□ -0.78
LINC00349-201ENST00000448748 SPATA31E1Q6ZUB1 1445 aa10.19□□□□□ -0.78
LINC00349-201ENST00000448748 EPXP11678 715 aa10.19□□□□□ -0.78
LINC00349-201ENST00000448748 KCNQ4P56696 695 aa10.19□□□□□ -0.78
LINC00349-201ENST00000448748 CLP1Q92989 425 aaKnown RBP10.19□□□□□ -0.78
LINC00349-201ENST00000448748 LRFN2Q9ULH4 789 aa10.19□□□□□ -0.78
LINC00349-201ENST00000448748 KCNH4Q9UQ05 1017 aa10.19□□□□□ -0.78
LINC00349-201ENST00000448748 XRN1Q8IZH2 1706 aaKnown RBP10.19□□□□□ -0.78
LINC00349-201ENST00000448748 GSK3AP49840 483 aa10.18□□□□□ -0.78
LINC00349-201ENST00000448748 SPEM2Q0P670 501 aa10.18□□□□□ -0.78
LINC00349-201ENST00000448748 RAB44Q7Z6P3 723 aaPredicted RBP10.18□□□□□ -0.78
LINC00349-201ENST00000448748 SYT9Q86SS6 491 aa10.18□□□□□ -0.78
LINC00349-201ENST00000448748 TXNDC2Q86VQ3 553 aa10.18□□□□□ -0.78
LINC00349-201ENST00000448748 MKNK1Q9BUB5 465 aa10.18□□□□□ -0.78
LINC00349-201ENST00000448748 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.18□□□□□ -0.78
LINC00349-201ENST00000448748 PRAG1Q86YV5 1406 aa10.17□□□□□ -0.78
LINC00349-201ENST00000448748 CNTNAP5Q8WYK1 1306 aa10.17□□□□□ -0.78
LINC00349-201ENST00000448748 RNF225M0QZC1 329 aaPredicted RBP10.17□□□□□ -0.78
LINC00349-201ENST00000448748 PPP1R15AO75807 674 aaPredicted RBP10.17□□□□□ -0.78
LINC00349-201ENST00000448748 KCNMA1Q12791 1236 aa10.17□□□□□ -0.78
LINC00349-201ENST00000448748 C11orf91Q3C1V1 193 aa10.17□□□□□ -0.78
LINC00349-201ENST00000448748 CAPN12Q6ZSI9 719 aa10.17□□□□□ -0.78
LINC00349-201ENST00000448748 SCARF2Q96GP6 870 aaPredicted RBP10.17□□□□□ -0.78
LINC00349-201ENST00000448748 EID1Q9Y6B2 187 aa10.17□□□□□ -0.78
LINC00349-201ENST00000448748 SNRPNP63162 240 aaKnown RBP10.16□□□□□ -0.78
LINC00349-201ENST00000448748 COX20Q5RI15 118 aa10.16□□□□□ -0.78
LINC00349-201ENST00000448748 PIK3R4Q99570 1358 aa10.15□□□□□ -0.78
LINC00349-201ENST00000448748 AMPD1P23109 780 aa10.15□□□□□ -0.78
LINC00349-201ENST00000448748 IRS1P35568 1242 aa10.15□□□□□ -0.78
LINC00349-201ENST00000448748 IDH3AP50213 366 aa10.15□□□□□ -0.78
LINC00349-201ENST00000448748 BTBD6Q96KE9 485 aa10.15□□□□□ -0.78
LINC00349-201ENST00000448748 MPHOSPH9Q99550 1183 aa10.15□□□□□ -0.78
LINC00349-201ENST00000448748 SAP130Q9H0E3 1048 aa10.15□□□□□ -0.78
LINC00349-201ENST00000448748 GRNP28799 593 aaKnown RBP10.14□□□□□ -0.79
LINC00349-201ENST00000448748 INPP5BP32019 993 aa10.14□□□□□ -0.79
LINC00349-201ENST00000448748 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.14□□□□□ -0.79
LINC00349-201ENST00000448748 COL26A1Q96A83 441 aa10.14□□□□□ -0.79
LINC00349-201ENST00000448748 RRAGCQ9HB90 399 aa10.14□□□□□ -0.79
LINC00349-201ENST00000448748 CCDC144AA2RUR9 1427 aa10.14□□□□□ -0.79
LINC00349-201ENST00000448748 NRXN1Q9ULB1 1477 aa10.13□□□□□ -0.79
LINC00349-201ENST00000448748 TMEM88BA6NKF7 163 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms