RNA–Protein interactions for RNA: ENST00000448611.6

LMNA-208, Transcript of lamin A/C, humanhuman

TSL 2 BASIC

Gene LMNA, Length 1,943 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-208ENST00000448611 C3orf67Q6ZVT6 689 aa21.22■□□□□ 0.99
LMNA-208ENST00000448611 RUFY3Q7L099 469 aa21.22■□□□□ 0.99
LMNA-208ENST00000448611 CYP46A1Q9Y6A2 500 aa21.22■□□□□ 0.99
LMNA-208ENST00000448611 U3KPZ7 1027 aaPredicted RBP21.22■□□□□ 0.99
LMNA-208ENST00000448611 COL4A1P02462 1669 aa21.22■□□□□ 0.99
LMNA-208ENST00000448611 AKAP11Q9UKA4 1901 aa21.22■□□□□ 0.99
LMNA-208ENST00000448611 TAF6LQ9Y6J9 622 aa21.21■□□□□ 0.99
LMNA-208ENST00000448611 MAST3O60307 1309 aa21.21■□□□□ 0.99
LMNA-208ENST00000448611 PSMA5P28066 241 aa21.21■□□□□ 0.99
LMNA-208ENST00000448611 ARID4AP29374 1257 aaPredicted RBP21.21■□□□□ 0.99
LMNA-208ENST00000448611 LRRFIP1Q32MZ4 808 aaKnown RBP21.21■□□□□ 0.99
LMNA-208ENST00000448611 CCDC102BQ68D86 513 aa21.21■□□□□ 0.99
LMNA-208ENST00000448611 LRRC4BQ9NT99 713 aa21.21■□□□□ 0.99
LMNA-208ENST00000448611 PDRG1Q9NUG6 133 aa21.21■□□□□ 0.99
LMNA-208ENST00000448611 ZFYP08048 801 aaPredicted RBP21.2■□□□□ 0.98
LMNA-208ENST00000448611 SF3B2Q13435 895 aaKnown RBP21.2■□□□□ 0.98
LMNA-208ENST00000448611 CLEC17AQ6ZS10 378 aa21.2■□□□□ 0.98
LMNA-208ENST00000448611 SETDB2Q96T68 719 aa21.2■□□□□ 0.98
LMNA-208ENST00000448611 LIMCH1Q9UPQ0 1083 aa21.2■□□□□ 0.98
LMNA-208ENST00000448611 SLC5A1P13866 664 aa21.19■□□□□ 0.98
LMNA-208ENST00000448611 PHKA1P46020 1223 aa21.19■□□□□ 0.98
LMNA-208ENST00000448611 PKP1Q13835 747 aa21.19■□□□□ 0.98
LMNA-208ENST00000448611 CDC5LQ99459 802 aaKnown RBP21.19■□□□□ 0.98
LMNA-208ENST00000448611 DSCC1Q9BVC3 393 aa21.19■□□□□ 0.98
LMNA-208ENST00000448611 NYXQ9GZU5 481 aa21.19■□□□□ 0.98
LMNA-208ENST00000448611 C4AP0C0L4 1744 aa21.19■□□□□ 0.98
LMNA-208ENST00000448611 GBP4Q96PP9 640 aa21.19■□□□□ 0.98
LMNA-208ENST00000448611 TNS1Q9HBL0 1735 aaKnown RBP21.19■□□□□ 0.98
LMNA-208ENST00000448611 M0R2C6 588 aa21.18■□□□□ 0.98
LMNA-208ENST00000448611 UQCRFS1P1P0C7P4 283 aa21.18■□□□□ 0.98
LMNA-208ENST00000448611 OSBP2Q969R2 916 aa21.18■□□□□ 0.98
LMNA-208ENST00000448611 CASZ1Q86V15 1759 aa21.18■□□□□ 0.98
LMNA-208ENST00000448611 SNAP23O00161 211 aa21.17■□□□□ 0.98
LMNA-208ENST00000448611 GTF2E1P29083 439 aaPredicted RBP21.17■□□□□ 0.98
LMNA-208ENST00000448611 CHRNDQ07001 517 aa21.17■□□□□ 0.98
LMNA-208ENST00000448611 COL9A3Q14050 684 aaPredicted RBP21.17■□□□□ 0.98
LMNA-208ENST00000448611 DDX11L8A8MPP1 907 aa21.17■□□□□ 0.98
LMNA-208ENST00000448611 PLSCR1O15162 318 aa21.17■□□□□ 0.98
LMNA-208ENST00000448611 CYP21A2P08686 494 aa21.17■□□□□ 0.98
LMNA-208ENST00000448611 KRT32Q14532 448 aa21.17■□□□□ 0.98
LMNA-208ENST00000448611 TRAPPC3LQ5T215 181 aa21.17■□□□□ 0.98
LMNA-208ENST00000448611 ILDR2Q71H61 639 aa21.17■□□□□ 0.98
LMNA-208ENST00000448611 NBPF5PQ86XG9 351 aaPredicted RBP21.17■□□□□ 0.98
LMNA-208ENST00000448611 ZDHHC9Q9Y397 364 aa21.17■□□□□ 0.98
LMNA-208ENST00000448611 HSPD1P10809 573 aaKnown RBP21.16■□□□□ 0.98
LMNA-208ENST00000448611 DEKP35659 375 aaKnown RBP21.16■□□□□ 0.98
LMNA-208ENST00000448611 TTF1Q15361 905 aaPredicted RBP21.16■□□□□ 0.98
LMNA-208ENST00000448611 BLOC1S2Q6QNY1 142 aa21.16■□□□□ 0.98
LMNA-208ENST00000448611 ALDH8A1Q9H2A2 487 aaPredicted RBP21.16■□□□□ 0.98
LMNA-208ENST00000448611 RPS6KB1P23443 525 aa21.16■□□□□ 0.98
LMNA-208ENST00000448611 RFC4P35249 363 aa21.16■□□□□ 0.98
LMNA-208ENST00000448611 ANKRD18AQ8IVF6 992 aa21.16■□□□□ 0.98
LMNA-208ENST00000448611 APPBP2Q92624 585 aa21.16■□□□□ 0.98
LMNA-208ENST00000448611 LARP6Q9BRS8 491 aaKnown RBP21.16■□□□□ 0.98
LMNA-208ENST00000448611 PHF14O94880 888 aa21.15■□□□□ 0.98
LMNA-208ENST00000448611 TPTE2Q6XPS3 522 aa21.15■□□□□ 0.98
LMNA-208ENST00000448611 DDX24Q9GZR7 859 aaKnown RBP eCLIP21.15■□□□□ 0.982e-7■■■□□ 17.1
LMNA-208ENST00000448611 PIH1D3Q9NQM4 214 aaKnown RBP21.15■□□□□ 0.98
LMNA-208ENST00000448611 LARGE1O95461 756 aa21.14■□□□□ 0.98
LMNA-208ENST00000448611 ADRA2BP18089 450 aa21.14■□□□□ 0.98
LMNA-208ENST00000448611 BSDC1Q9NW68 430 aaPredicted RBP21.14■□□□□ 0.98
LMNA-208ENST00000448611 MYH7P12883 1935 aa21.14■□□□□ 0.97
LMNA-208ENST00000448611 EN1Q05925 392 aaPredicted RBP21.14■□□□□ 0.97
LMNA-208ENST00000448611 TXNRD1Q16881 649 aa21.14■□□□□ 0.97
LMNA-208ENST00000448611 WASHC4Q2M389 1173 aa21.14■□□□□ 0.97
LMNA-208ENST00000448611 SLC27A3Q5K4L6 730 aa21.14■□□□□ 0.97
LMNA-208ENST00000448611 ZSCAN31Q96LW9 406 aaPredicted RBP21.14■□□□□ 0.97
LMNA-208ENST00000448611 NLRP3Q96P20 1036 aa21.14■□□□□ 0.97
LMNA-208ENST00000448611 A0A1B0GUL6 1792 aa21.13■□□□□ 0.97
LMNA-208ENST00000448611 ADD2P35612 726 aa21.13■□□□□ 0.97
LMNA-208ENST00000448611 RASGRF1Q13972 1273 aa21.13■□□□□ 0.97
LMNA-208ENST00000448611 GSE1Q14687 1217 aa21.13■□□□□ 0.97
LMNA-208ENST00000448611 ZSCAN25Q6NSZ9 544 aa21.13■□□□□ 0.97
LMNA-208ENST00000448611 CCDC125Q86Z20 511 aa21.13■□□□□ 0.97
LMNA-208ENST00000448611 PROM2Q8N271 834 aa21.13■□□□□ 0.97
LMNA-208ENST00000448611 SPATA5Q8NB90 893 aa21.13■□□□□ 0.97
LMNA-208ENST00000448611 NEK1Q96PY6 1258 aa21.13■□□□□ 0.97
LMNA-208ENST00000448611 PUS7LQ9H0K6 701 aaKnown RBP21.13■□□□□ 0.97
LMNA-208ENST00000448611 SH2B1Q9NRF2 756 aaPredicted RBP21.13■□□□□ 0.97
LMNA-208ENST00000448611 FOXP2O15409 715 aa21.12■□□□□ 0.97
LMNA-208ENST00000448611 BAG4O95429 457 aaKnown RBP21.12■□□□□ 0.97
LMNA-208ENST00000448611 BAG6P46379 1132 aa21.12■□□□□ 0.97
LMNA-208ENST00000448611 CELF1Q92879 486 aaKnown RBP21.12■□□□□ 0.97
LMNA-208ENST00000448611 DEFB132Q7Z7B7 95 aa21.12■□□□□ 0.97
LMNA-208ENST00000448611 TAF1P21675 1872 aa21.11■□□□□ 0.97
LMNA-208ENST00000448611 UBR3Q6ZT12 1888 aa21.11■□□□□ 0.97
LMNA-208ENST00000448611 BRD1O95696 1058 aa21.11■□□□□ 0.97
LMNA-208ENST00000448611 UBE3CQ15386 1083 aa21.11■□□□□ 0.97
LMNA-208ENST00000448611 SLC9C2Q5TAH2 1124 aa21.11■□□□□ 0.97
LMNA-208ENST00000448611 STOX1Q6ZVD7 989 aa21.11■□□□□ 0.97
LMNA-208ENST00000448611 TCEANC2Q96MN5 208 aa21.11■□□□□ 0.97
LMNA-208ENST00000448611 TPCN1Q9ULQ1 816 aa21.11■□□□□ 0.97
LMNA-208ENST00000448611 CARMIL3Q8ND23 1372 aa21.1■□□□□ 0.97
LMNA-208ENST00000448611 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.1■□□□□ 0.97
LMNA-208ENST00000448611 BCAMP50895 628 aa21.1■□□□□ 0.97
LMNA-208ENST00000448611 TOB2Q14106 344 aaPredicted RBP21.1■□□□□ 0.97
LMNA-208ENST00000448611 NFIXQ14938 502 aa21.1■□□□□ 0.97
LMNA-208ENST00000448611 ANKRD1Q15327 319 aa21.1■□□□□ 0.97
LMNA-208ENST00000448611 EZH2Q15910 746 aaKnown RBP21.1■□□□□ 0.97
LMNA-208ENST00000448611 ME3Q16798 604 aa21.1■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms