RNA–Protein interactions for RNA: ENST00000447872.5

VSTM1-206, Transcript of V-set and transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene VSTM1, Length 1,041 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSTM1-206ENST00000447872 UBE3BQ7Z3V4 1068 aa13.25□□□□□ -0.29
VSTM1-206ENST00000447872 GMLQ99445 158 aa13.25□□□□□ -0.29
VSTM1-206ENST00000447872 DDX60Q8IY21 1712 aaKnown RBP13.25□□□□□ -0.29
VSTM1-206ENST00000447872 ASTN2O75129 1339 aaPredicted RBP13.24□□□□□ -0.29
VSTM1-206ENST00000447872 ANGEL2Q5VTE6 544 aaKnown RBP13.24□□□□□ -0.29
VSTM1-206ENST00000447872 G2E3Q7L622 706 aa13.24□□□□□ -0.29
VSTM1-206ENST00000447872 ZIC5Q96T25 663 aa13.24□□□□□ -0.29
VSTM1-206ENST00000447872 MYOZ2Q9NPC6 264 aa13.24□□□□□ -0.29
VSTM1-206ENST00000447872 COL4A1P02462 1669 aa13.24□□□□□ -0.29
VSTM1-206ENST00000447872 WTIPA6NIX2 430 aaPredicted RBP13.23□□□□□ -0.29
VSTM1-206ENST00000447872 FAM155AB1AL88 458 aaPredicted RBP13.23□□□□□ -0.29
VSTM1-206ENST00000447872 IGHMBP2P38935 993 aaKnown RBP13.23□□□□□ -0.29
VSTM1-206ENST00000447872 CCT4P50991 539 aaKnown RBP13.23□□□□□ -0.29
VSTM1-206ENST00000447872 GCKRQ14397 625 aa13.23□□□□□ -0.29
VSTM1-206ENST00000447872 NCBP3Q53F19 620 aaKnown RBP13.23□□□□□ -0.29
VSTM1-206ENST00000447872 OGFOD1Q8N543 542 aa13.23□□□□□ -0.29
VSTM1-206ENST00000447872 CDCA5Q96FF9 252 aa13.23□□□□□ -0.29
VSTM1-206ENST00000447872 MYH16Q9H6N6 1097 aa13.23□□□□□ -0.29
VSTM1-206ENST00000447872 LEMD3Q9Y2U8 911 aa13.23□□□□□ -0.29
VSTM1-206ENST00000447872 THSD7BQ9C0I4 1608 aa13.22□□□□□ -0.29
VSTM1-206ENST00000447872 KIF23Q02241 960 aaPredicted RBP13.22□□□□□ -0.29
VSTM1-206ENST00000447872 FLIIQ13045 1269 aa13.22□□□□□ -0.29
VSTM1-206ENST00000447872 FKBP5Q13451 457 aaPredicted RBP13.22□□□□□ -0.29
VSTM1-206ENST00000447872 ERICH6BQ5W0A0 696 aa13.22□□□□□ -0.29
VSTM1-206ENST00000447872 MPHOSPH8Q99549 860 aa13.22□□□□□ -0.29
VSTM1-206ENST00000447872 ANKRD2Q9GZV1 360 aa13.22□□□□□ -0.29
VSTM1-206ENST00000447872 COA1Q9GZY4 146 aa13.22□□□□□ -0.29
VSTM1-206ENST00000447872 TAF1P21675 1872 aa13.22□□□□□ -0.29
VSTM1-206ENST00000447872 ZNF609O15014 1411 aa13.22□□□□□ -0.29
VSTM1-206ENST00000447872 MED23Q9ULK4 1368 aa13.21□□□□□ -0.29
VSTM1-206ENST00000447872 PITPNM2Q9BZ72 1349 aa13.21□□□□□ -0.29
VSTM1-206ENST00000447872 DLL1O00548 723 aa13.21□□□□□ -0.29
VSTM1-206ENST00000447872 ITGA6P23229 1130 aa13.21□□□□□ -0.29
VSTM1-206ENST00000447872 FKBP1BP68106 108 aa13.21□□□□□ -0.29
VSTM1-206ENST00000447872 STRIP1Q5VSL9 837 aa13.21□□□□□ -0.29
VSTM1-206ENST00000447872 LINS1Q8NG48 757 aa13.21□□□□□ -0.29
VSTM1-206ENST00000447872 DNAAF4Q8WXU2 420 aa13.21□□□□□ -0.29
VSTM1-206ENST00000447872 FBXW7Q969H0 707 aa13.21□□□□□ -0.29
VSTM1-206ENST00000447872 PLA2G12BQ9BX93 195 aa13.21□□□□□ -0.29
VSTM1-206ENST00000447872 SAGE1Q9NXZ1 904 aa13.21□□□□□ -0.29
VSTM1-206ENST00000447872 ZNF804BA4D1E1 1349 aa13.2□□□□□ -0.3
VSTM1-206ENST00000447872 KCNJ4P48050 445 aa13.2□□□□□ -0.3
VSTM1-206ENST00000447872 MMP14P50281 582 aa13.2□□□□□ -0.3
VSTM1-206ENST00000447872 DGKZQ13574 1117 aa13.2□□□□□ -0.3
VSTM1-206ENST00000447872 DACT2Q5SW24 774 aa13.2□□□□□ -0.3
VSTM1-206ENST00000447872 WDR63Q8IWG1 891 aa13.2□□□□□ -0.3
VSTM1-206ENST00000447872 MXD3Q9BW11 206 aa13.2□□□□□ -0.3
VSTM1-206ENST00000447872 SALL2Q9Y467 1007 aaPredicted RBP13.2□□□□□ -0.3
VSTM1-206ENST00000447872 MYO3BQ8WXR4 1341 aa13.19□□□□□ -0.3
VSTM1-206ENST00000447872 FANCIQ9NVI1 1328 aa13.19□□□□□ -0.3
VSTM1-206ENST00000447872 TRPM7Q96QT4 1865 aa13.19□□□□□ -0.3
VSTM1-206ENST00000447872 VAMP4O75379 141 aa13.19□□□□□ -0.3
VSTM1-206ENST00000447872 TRPA1O75762 1119 aa13.19□□□□□ -0.3
VSTM1-206ENST00000447872 CSF1RP07333 972 aa13.19□□□□□ -0.3
VSTM1-206ENST00000447872 SLC10A3P09131 477 aa13.19□□□□□ -0.3
VSTM1-206ENST00000447872 NBPF9Q3BBW0 867 aa13.19□□□□□ -0.3
VSTM1-206ENST00000447872 TTLL5Q6EMB2 1281 aa13.19□□□□□ -0.3
VSTM1-206ENST00000447872 TXNRD3Q86VQ6 643 aa13.19□□□□□ -0.3
VSTM1-206ENST00000447872 REM2Q8IYK8 340 aaPredicted RBP13.19□□□□□ -0.3
VSTM1-206ENST00000447872 TSHZ2Q9NRE2 1034 aa13.19□□□□□ -0.3
VSTM1-206ENST00000447872 RNF186Q9NXI6 227 aa13.19□□□□□ -0.3
VSTM1-206ENST00000447872 ANKRD18BA2A2Z9 1011 aa13.18□□□□□ -0.3
VSTM1-206ENST00000447872 CASP7P55210 303 aa13.18□□□□□ -0.3
VSTM1-206ENST00000447872 SOX10P56693 466 aa13.18□□□□□ -0.3
VSTM1-206ENST00000447872 HABP4Q5JVS0 413 aaKnown RBP13.18□□□□□ -0.3
VSTM1-206ENST00000447872 CSRNP1Q96S65 589 aa13.18□□□□□ -0.3
VSTM1-206ENST00000447872 HDAC9Q9UKV0 1011 aa13.18□□□□□ -0.3
VSTM1-206ENST00000447872 UBE2Q2LH0YL09 131 aa13.17□□□□□ -0.3
VSTM1-206ENST00000447872 WNT10BO00744 389 aa13.17□□□□□ -0.3
VSTM1-206ENST00000447872 NF2P35240 595 aa13.17□□□□□ -0.3
VSTM1-206ENST00000447872 IRX6P78412 446 aaPredicted RBP13.17□□□□□ -0.3
VSTM1-206ENST00000447872 EXOSC9Q06265 439 aaKnown RBP13.17□□□□□ -0.3
VSTM1-206ENST00000447872 IFIT5Q13325 482 aaKnown RBP13.17□□□□□ -0.3
VSTM1-206ENST00000447872 TTLL12Q14166 644 aaPredicted RBP13.17□□□□□ -0.3
VSTM1-206ENST00000447872 PRAMEF18Q5VWM3 479 aa13.17□□□□□ -0.3
VSTM1-206ENST00000447872 RASAL3Q86YV0 1011 aa13.17□□□□□ -0.3
VSTM1-206ENST00000447872 SCAF8Q9UPN6 1271 aaKnown RBP13.17□□□□□ -0.3
VSTM1-206ENST00000447872 KLRK1P26718 216 aa13.16□□□□□ -0.3
VSTM1-206ENST00000447872 GTF2IP78347 998 aa13.16□□□□□ -0.3
VSTM1-206ENST00000447872 CHRNDQ07001 517 aa13.16□□□□□ -0.3
VSTM1-206ENST00000447872 KIAA0825Q8IV33 1275 aa13.16□□□□□ -0.3
VSTM1-206ENST00000447872 CHMP3Q9Y3E7 222 aa13.16□□□□□ -0.3
VSTM1-206ENST00000447872 F6X3S4 739 aa13.15□□□□□ -0.3
VSTM1-206ENST00000447872 SASH1O94885 1247 aa13.15□□□□□ -0.3
VSTM1-206ENST00000447872 FOXO4P98177 505 aa13.15□□□□□ -0.3
VSTM1-206ENST00000447872 MOB2Q70IA6 237 aa13.15□□□□□ -0.3
VSTM1-206ENST00000447872 CD209Q9NNX6 404 aa13.15□□□□□ -0.3
VSTM1-206ENST00000447872 TAF5LO75529 589 aa13.14□□□□□ -0.31
VSTM1-206ENST00000447872 BEND3Q5T5X7 828 aa13.14□□□□□ -0.31
VSTM1-206ENST00000447872 APOBEC3FQ8IUX4 373 aaKnown RBP13.14□□□□□ -0.31
VSTM1-206ENST00000447872 HELBQ8NG08 1087 aaPredicted RBP13.14□□□□□ -0.31
VSTM1-206ENST00000447872 DLGAP5Q15398 846 aa13.13□□□□□ -0.31
VSTM1-206ENST00000447872 CCDC57Q2TAC2 916 aa13.13□□□□□ -0.31
VSTM1-206ENST00000447872 TAF7LQ5H9L4 462 aa13.13□□□□□ -0.31
VSTM1-206ENST00000447872 LMBR1LQ6UX01 489 aa13.13□□□□□ -0.31
VSTM1-206ENST00000447872 C15orf52Q6ZUT6 534 aaKnown RBP13.13□□□□□ -0.31
VSTM1-206ENST00000447872 ARMC9Q7Z3E5 817 aa13.13□□□□□ -0.31
VSTM1-206ENST00000447872 ZNF804AQ7Z570 1209 aa13.13□□□□□ -0.31
VSTM1-206ENST00000447872 PPP4R2Q9NY27 417 aa13.13□□□□□ -0.31
VSTM1-206ENST00000447872 C9orf78Q9NZ63 289 aaPredicted RBP13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms