RNA–Protein interactions for RNA: ENST00000447830.2

SPATC1-202, Transcript of spermatogenesis and centriole associated 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPATC1, Length 1,795 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPATC1-202ENST00000447830 LRP5O75197 1615 aa18.45■□□□□ 0.54
SPATC1-202ENST00000447830 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.45■□□□□ 0.54
SPATC1-202ENST00000447830 IFIT1P09914 478 aaKnown RBP18.45■□□□□ 0.54
SPATC1-202ENST00000447830 KRT32Q14532 448 aa18.45■□□□□ 0.54
SPATC1-202ENST00000447830 BCL2L12Q9HB09 334 aa18.45■□□□□ 0.54
SPATC1-202ENST00000447830 LMBRD1Q9NUN5 540 aa18.45■□□□□ 0.54
SPATC1-202ENST00000447830 GOLGA6L3A6NEY3 463 aa18.44■□□□□ 0.54
SPATC1-202ENST00000447830 GOLIM4O00461 696 aa18.44■□□□□ 0.54
SPATC1-202ENST00000447830 PDE8AO60658 829 aa18.44■□□□□ 0.54
SPATC1-202ENST00000447830 CPA1P15085 419 aa18.44■□□□□ 0.54
SPATC1-202ENST00000447830 CCDC158Q5M9N0 1113 aa18.44■□□□□ 0.54
SPATC1-202ENST00000447830 CLEC4GQ6UXB4 293 aa18.44■□□□□ 0.54
SPATC1-202ENST00000447830 NIP7Q9Y221 180 aaKnown RBP eCLIP18.44■□□□□ 0.54
SPATC1-202ENST00000447830 RTCBQ9Y3I0 505 aaKnown RBP18.44■□□□□ 0.54
SPATC1-202ENST00000447830 RIPOR2Q9Y4F9 1068 aa18.44■□□□□ 0.54
SPATC1-202ENST00000447830 WDR33Q9C0J8 1336 aaKnown RBP18.43■□□□□ 0.54
SPATC1-202ENST00000447830 ITGA6P23229 1130 aa18.43■□□□□ 0.54
SPATC1-202ENST00000447830 ANKRD1Q15327 319 aa18.43■□□□□ 0.54
SPATC1-202ENST00000447830 SRP68Q9UHB9 627 aaKnown RBP18.43■□□□□ 0.54
SPATC1-202ENST00000447830 ANKRD18BA2A2Z9 1011 aa18.42■□□□□ 0.54
SPATC1-202ENST00000447830 ZMYM1Q5SVZ6 1142 aa18.42■□□□□ 0.54
SPATC1-202ENST00000447830 BLOC1S2Q6QNY1 142 aa18.42■□□□□ 0.54
SPATC1-202ENST00000447830 XAGE2Q96GT9 111 aa18.42■□□□□ 0.54
SPATC1-202ENST00000447830 UTP14AQ9BVJ6 771 aaKnown RBP18.42■□□□□ 0.54
SPATC1-202ENST00000447830 GREM2Q9H772 168 aa18.42■□□□□ 0.54
SPATC1-202ENST00000447830 ZNF652Q9Y2D9 606 aa18.42■□□□□ 0.54
SPATC1-202ENST00000447830 NTSR2O95665 410 aa18.42■□□□□ 0.54
SPATC1-202ENST00000447830 HCLS1P14317 486 aaPredicted RBP18.42■□□□□ 0.54
SPATC1-202ENST00000447830 RPS6KB1P23443 525 aa18.42■□□□□ 0.54
SPATC1-202ENST00000447830 LRRFIP1Q32MZ4 808 aaKnown RBP18.42■□□□□ 0.54
SPATC1-202ENST00000447830 DDX49Q9Y6V7 483 aaKnown RBP18.42■□□□□ 0.54
SPATC1-202ENST00000447830 SRCAPQ6ZRS2 3230 aa18.41■□□□□ 0.54
SPATC1-202ENST00000447830 ADRA2BP18089 450 aa18.41■□□□□ 0.54
SPATC1-202ENST00000447830 PARP10Q53GL7 1025 aa18.41■□□□□ 0.54
SPATC1-202ENST00000447830 ARHGEF1Q92888 912 aaKnown RBP18.41■□□□□ 0.54
SPATC1-202ENST00000447830 SEC62Q99442 399 aaKnown RBP18.41■□□□□ 0.54
SPATC1-202ENST00000447830 DSCC1Q9BVC3 393 aa18.41■□□□□ 0.54
SPATC1-202ENST00000447830 NARFQ9UHQ1 456 aa18.41■□□□□ 0.54
SPATC1-202ENST00000447830 TTC39AQ5SRH9 613 aa18.4■□□□□ 0.54
SPATC1-202ENST00000447830 LDHAL6AQ6ZMR3 332 aa18.4■□□□□ 0.54
SPATC1-202ENST00000447830 ZNF512BQ96KM6 892 aaPredicted RBP18.4■□□□□ 0.54
SPATC1-202ENST00000447830 LAMB2P55268 1798 aa18.4■□□□□ 0.54
SPATC1-202ENST00000447830 RNF113AO15541 343 aaKnown RBP18.4■□□□□ 0.54
SPATC1-202ENST00000447830 LARGE1O95461 756 aa18.4■□□□□ 0.54
SPATC1-202ENST00000447830 ADORA1P30542 326 aa18.4■□□□□ 0.54
SPATC1-202ENST00000447830 ATP2B3Q16720 1220 aa18.4■□□□□ 0.54
SPATC1-202ENST00000447830 GORABQ5T7V8 394 aa18.4■□□□□ 0.54
SPATC1-202ENST00000447830 TBC1D9BQ66K14 1250 aa18.4■□□□□ 0.54
SPATC1-202ENST00000447830 VGLL2Q8N8G2 317 aa18.4■□□□□ 0.54
SPATC1-202ENST00000447830 SMC3Q9UQE7 1217 aa18.4■□□□□ 0.54
SPATC1-202ENST00000447830 CHGBP05060 677 aa18.39■□□□□ 0.53
SPATC1-202ENST00000447830 ZFYP08048 801 aaPredicted RBP18.39■□□□□ 0.53
SPATC1-202ENST00000447830 METTL24Q5JXM2 366 aa18.39■□□□□ 0.53
SPATC1-202ENST00000447830 TRAPPC3LQ5T215 181 aa18.39■□□□□ 0.53
SPATC1-202ENST00000447830 CCDC129Q6ZRS4 1044 aa18.39■□□□□ 0.53
SPATC1-202ENST00000447830 FLAD1Q8NFF5 587 aa18.39■□□□□ 0.53
SPATC1-202ENST00000447830 TAF6LQ9Y6J9 622 aa18.39■□□□□ 0.53
SPATC1-202ENST00000447830 ZBTB7AO95365 584 aa18.38■□□□□ 0.53
SPATC1-202ENST00000447830 PDIA4P13667 645 aaKnown RBP18.38■□□□□ 0.53
SPATC1-202ENST00000447830 ME3Q16798 604 aa18.38■□□□□ 0.53
SPATC1-202ENST00000447830 BICDL1Q6ZP65 573 aa18.38■□□□□ 0.53
SPATC1-202ENST00000447830 ARAP2Q8WZ64 1704 aa18.38■□□□□ 0.53
SPATC1-202ENST00000447830 MRE11P49959 708 aa18.37■□□□□ 0.53
SPATC1-202ENST00000447830 CNNM1Q9NRU3 951 aa18.37■□□□□ 0.53
SPATC1-202ENST00000447830 TPCN1Q9ULQ1 816 aa18.37■□□□□ 0.53
SPATC1-202ENST00000447830 DDX60Q8IY21 1712 aaKnown RBP18.37■□□□□ 0.53
SPATC1-202ENST00000447830 MYH7P12883 1935 aa18.37■□□□□ 0.53
SPATC1-202ENST00000447830 AKAP11Q9UKA4 1901 aa18.37■□□□□ 0.53
SPATC1-202ENST00000447830 PRPF40AO75400 957 aaKnown RBP18.37■□□□□ 0.53
SPATC1-202ENST00000447830 CYP21A2P08686 494 aa18.37■□□□□ 0.53
SPATC1-202ENST00000447830 HSP90B1P14625 803 aaKnown RBP18.37■□□□□ 0.53
SPATC1-202ENST00000447830 ST3GAL1Q11201 340 aa18.37■□□□□ 0.53
SPATC1-202ENST00000447830 CCDC83Q8IWF9 413 aa18.37■□□□□ 0.53
SPATC1-202ENST00000447830 NEK1Q96PY6 1258 aa18.37■□□□□ 0.53
SPATC1-202ENST00000447830 LARP6Q9BRS8 491 aaKnown RBP18.37■□□□□ 0.53
SPATC1-202ENST00000447830 MAST3O60307 1309 aa18.37■□□□□ 0.53
SPATC1-202ENST00000447830 RTL9Q8NET4 1388 aa18.36■□□□□ 0.53
SPATC1-202ENST00000447830 STX6O43752 255 aa18.36■□□□□ 0.53
SPATC1-202ENST00000447830 ZPR1O75312 459 aa18.36■□□□□ 0.53
SPATC1-202ENST00000447830 PDE8BO95263 885 aa18.36■□□□□ 0.53
SPATC1-202ENST00000447830 ZSCAN22P10073 491 aaPredicted RBP18.36■□□□□ 0.53
SPATC1-202ENST00000447830 TOB2Q14106 344 aaPredicted RBP18.36■□□□□ 0.53
SPATC1-202ENST00000447830 HMGB1P09429 215 aaKnown RBP18.35■□□□□ 0.53
SPATC1-202ENST00000447830 SYT1P21579 422 aa18.35■□□□□ 0.53
SPATC1-202ENST00000447830 RFC4P35249 363 aa18.35■□□□□ 0.53
SPATC1-202ENST00000447830 FKBP4Q02790 459 aaKnown RBP eCLIP18.35■□□□□ 0.53
SPATC1-202ENST00000447830 COL9A3Q14050 684 aaPredicted RBP18.35■□□□□ 0.53
SPATC1-202ENST00000447830 ERFEQ4G0M1 354 aa18.35■□□□□ 0.53
SPATC1-202ENST00000447830 MSL1Q68DK7 614 aa18.35■□□□□ 0.53
SPATC1-202ENST00000447830 MROH5Q6ZUA9 1318 aa18.35■□□□□ 0.53
SPATC1-202ENST00000447830 MBD3O95983 291 aa18.35■□□□□ 0.53
SPATC1-202ENST00000447830 XRCC6P12956 609 aaKnown RBP eCLIP18.35■□□□□ 0.53
SPATC1-202ENST00000447830 GYS1P13807 737 aa18.35■□□□□ 0.53
SPATC1-202ENST00000447830 GJB2P29033 226 aa18.35■□□□□ 0.53
SPATC1-202ENST00000447830 FOXD4L5Q5VV16 416 aaPredicted RBP18.35■□□□□ 0.53
SPATC1-202ENST00000447830 C3orf67Q6ZVT6 689 aa18.35■□□□□ 0.53
SPATC1-202ENST00000447830 SLC16A10Q8TF71 515 aa18.35■□□□□ 0.53
SPATC1-202ENST00000447830 FOXD4L4Q8WXT5 416 aaPredicted RBP18.35■□□□□ 0.53
SPATC1-202ENST00000447830 HSPD1P10809 573 aaKnown RBP18.34■□□□□ 0.53
SPATC1-202ENST00000447830 SCARF1Q14162 830 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms