RNA–Protein interactions for RNA: ENST00000447601.6

FAM3A-215, Transcript of family with sequence similarity 3 member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FAM3A, Length 1,800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-215ENST00000447601 STX6O43752 255 aa23.22■■□□□ 1.31
FAM3A-215ENST00000447601 PDIA4P13667 645 aaKnown RBP23.22■■□□□ 1.31
FAM3A-215ENST00000447601 FGFR2P21802 821 aa23.22■■□□□ 1.31
FAM3A-215ENST00000447601 GJB2P29033 226 aa23.22■■□□□ 1.31
FAM3A-215ENST00000447601 WASHC4Q2M389 1173 aa23.22■■□□□ 1.31
FAM3A-215ENST00000447601 ZSCAN22P10073 491 aaPredicted RBP23.22■■□□□ 1.31
FAM3A-215ENST00000447601 SLC5A1P13866 664 aa23.22■■□□□ 1.31
FAM3A-215ENST00000447601 SYT1P21579 422 aa23.22■■□□□ 1.31
FAM3A-215ENST00000447601 ARID4AP29374 1257 aaPredicted RBP23.22■■□□□ 1.31
FAM3A-215ENST00000447601 IGHMBP2P38935 993 aaKnown RBP23.22■■□□□ 1.31
FAM3A-215ENST00000447601 COL9A3Q14050 684 aaPredicted RBP23.22■■□□□ 1.31
FAM3A-215ENST00000447601 MYH14Q7Z406 1995 aaKnown RBP23.21■■□□□ 1.31
FAM3A-215ENST00000447601 ST3GAL1Q11201 340 aa23.21■■□□□ 1.31
FAM3A-215ENST00000447601 RC3H1Q5TC82 1133 aaKnown RBP23.21■■□□□ 1.31
FAM3A-215ENST00000447601 CCDC102BQ68D86 513 aa23.21■■□□□ 1.31
FAM3A-215ENST00000447601 TCEANC2Q96MN5 208 aa23.21■■□□□ 1.31
FAM3A-215ENST00000447601 THSD7AQ9UPZ6 1657 aa23.2■■□□□ 1.3
FAM3A-215ENST00000447601 PI16Q6UXB8 463 aa23.2■■□□□ 1.3
FAM3A-215ENST00000447601 CTNNA3Q9UI47 895 aa23.2■■□□□ 1.3
FAM3A-215ENST00000447601 NECAB1Q8N987 351 aa23.19■■□□□ 1.3
FAM3A-215ENST00000447601 SEC31BQ9NQW1 1179 aa23.19■■□□□ 1.3
FAM3A-215ENST00000447601 ATP6V1DQ9Y5K8 247 aa23.19■■□□□ 1.3
FAM3A-215ENST00000447601 BCORQ6W2J9 1755 aa23.18■■□□□ 1.3
FAM3A-215ENST00000447601 PHKA1P46020 1223 aa23.18■■□□□ 1.3
FAM3A-215ENST00000447601 MRE11P49959 708 aa23.18■■□□□ 1.3
FAM3A-215ENST00000447601 HELBQ8NG08 1087 aaPredicted RBP23.18■■□□□ 1.3
FAM3A-215ENST00000447601 MBD3O95983 291 aa23.17■■□□□ 1.3
FAM3A-215ENST00000447601 NCLP19338 710 aaKnown RBP23.17■■□□□ 1.3
FAM3A-215ENST00000447601 MEX3CQ5U5Q3 659 aaKnown RBP23.17■■□□□ 1.3
FAM3A-215ENST00000447601 STOX1Q6ZVD7 989 aa23.17■■□□□ 1.3
FAM3A-215ENST00000447601 DHX32Q7L7V1 743 aaKnown RBP23.17■■□□□ 1.3
FAM3A-215ENST00000447601 CDC5LQ99459 802 aaKnown RBP23.17■■□□□ 1.3
FAM3A-215ENST00000447601 Q6ZUG5 572 aa23.17■■□□□ 1.3
FAM3A-215ENST00000447601 CHAMP1Q96JM3 812 aa23.17■■□□□ 1.3
FAM3A-215ENST00000447601 LAMB2P55268 1798 aa23.16■■□□□ 1.3
FAM3A-215ENST00000447601 RPS6KA4O75676 772 aa23.16■■□□□ 1.3
FAM3A-215ENST00000447601 F13A1P00488 732 aa23.16■■□□□ 1.3
FAM3A-215ENST00000447601 PDCP20941 246 aa23.16■■□□□ 1.3
FAM3A-215ENST00000447601 ADD2P35612 726 aa23.16■■□□□ 1.3
FAM3A-215ENST00000447601 PTF1AQ7RTS3 328 aa23.16■■□□□ 1.3
FAM3A-215ENST00000447601 DDX60Q8IY21 1712 aaKnown RBP23.15■■□□□ 1.3
FAM3A-215ENST00000447601 E7EWF7 191 aa23.15■■□□□ 1.3
FAM3A-215ENST00000447601 KCNQ4P56696 695 aa23.15■■□□□ 1.3
FAM3A-215ENST00000447601 UBE3CQ15386 1083 aa23.15■■□□□ 1.3
FAM3A-215ENST00000447601 GJD4Q96KN9 370 aaPredicted RBP23.15■■□□□ 1.3
FAM3A-215ENST00000447601 PUS7LQ9H0K6 701 aaKnown RBP23.15■■□□□ 1.3
FAM3A-215ENST00000447601 ATRNO75882 1429 aa23.15■■□□□ 1.3
FAM3A-215ENST00000447601 FGD1P98174 961 aa23.15■■□□□ 1.3
FAM3A-215ENST00000447601 SLC9C2Q5TAH2 1124 aa23.15■■□□□ 1.3
FAM3A-215ENST00000447601 CAVIN1Q6NZI2 390 aaKnown RBP23.15■■□□□ 1.3
FAM3A-215ENST00000447601 GPT2Q8TD30 523 aa23.15■■□□□ 1.3
FAM3A-215ENST00000447601 PIH1D3Q9NQM4 214 aaKnown RBP23.15■■□□□ 1.3
FAM3A-215ENST00000447601 NHSQ6T4R5 1651 aa23.14■■□□□ 1.3
FAM3A-215ENST00000447601 IMMTQ16891 758 aaKnown RBP23.14■■□□□ 1.29
FAM3A-215ENST00000447601 NARFQ9UHQ1 456 aa23.14■■□□□ 1.29
FAM3A-215ENST00000447601 CCNL1Q9UK58 526 aaPredicted RBP23.14■■□□□ 1.29
FAM3A-215ENST00000447601 MTMR6Q9Y217 621 aa23.14■■□□□ 1.29
FAM3A-215ENST00000447601 ARAP2Q8WZ64 1704 aa23.13■■□□□ 1.29
FAM3A-215ENST00000447601 GPAA1O43292 621 aa23.13■■□□□ 1.29
FAM3A-215ENST00000447601 IDH1O75874 414 aaKnown RBP23.13■■□□□ 1.29
FAM3A-215ENST00000447601 SF3B3Q15393 1217 aaKnown RBP23.13■■□□□ 1.29
FAM3A-215ENST00000447601 ERFEQ4G0M1 354 aa23.13■■□□□ 1.29
FAM3A-215ENST00000447601 SPATA5Q8NB90 893 aa23.13■■□□□ 1.29
FAM3A-215ENST00000447601 GTF3C6Q969F1 213 aa23.13■■□□□ 1.29
FAM3A-215ENST00000447601 XRCC6P12956 609 aaKnown RBP eCLIP23.12■■□□□ 1.29
FAM3A-215ENST00000447601 TMEM87AQ8NBN3 555 aa23.12■■□□□ 1.29
FAM3A-215ENST00000447601 CERKQ8TCT0 537 aa23.12■■□□□ 1.29
FAM3A-215ENST00000447601 BRF1Q92994 677 aa23.12■■□□□ 1.29
FAM3A-215ENST00000447601 NYXQ9GZU5 481 aa23.12■■□□□ 1.29
FAM3A-215ENST00000447601 GRPEL1Q9HAV7 217 aa23.12■■□□□ 1.29
FAM3A-215ENST00000447601 FOXP2O15409 715 aa23.12■■□□□ 1.29
FAM3A-215ENST00000447601 EXOSC10Q01780 885 aaKnown RBP23.12■■□□□ 1.29
FAM3A-215ENST00000447601 STK3Q13188 491 aa23.12■■□□□ 1.29
FAM3A-215ENST00000447601 LARP1BQ659C4 914 aaKnown RBP23.12■■□□□ 1.29
FAM3A-215ENST00000447601 AGXT2Q9BYV1 514 aa23.12■■□□□ 1.29
FAM3A-215ENST00000447601 SCN7AQ01118 1682 aa23.12■■□□□ 1.29
FAM3A-215ENST00000447601 GNPATO15228 680 aa23.11■■□□□ 1.29
FAM3A-215ENST00000447601 ZNF445P59923 1031 aa23.11■■□□□ 1.29
FAM3A-215ENST00000447601 CHRNDQ07001 517 aa23.11■■□□□ 1.29
FAM3A-215ENST00000447601 TBC1D9BQ66K14 1250 aa23.11■■□□□ 1.29
FAM3A-215ENST00000447601 TTLL5Q6EMB2 1281 aa23.11■■□□□ 1.29
FAM3A-215ENST00000447601 ANKRD18AQ8IVF6 992 aa23.11■■□□□ 1.29
FAM3A-215ENST00000447601 BCL2L12Q9HB09 334 aa23.11■■□□□ 1.29
FAM3A-215ENST00000447601 BRPF3Q9ULD4 1205 aa23.11■■□□□ 1.29
FAM3A-215ENST00000447601 VPS37CA5D8V6 355 aaPredicted RBP23.1■■□□□ 1.29
FAM3A-215ENST00000447601 ZPR1O75312 459 aa23.1■■□□□ 1.29
FAM3A-215ENST00000447601 FGAP02671 866 aa23.1■■□□□ 1.29
FAM3A-215ENST00000447601 GTF2E1P29083 439 aaPredicted RBP23.1■■□□□ 1.29
FAM3A-215ENST00000447601 FOXD4L6Q3SYB3 417 aaPredicted RBP23.1■■□□□ 1.29
FAM3A-215ENST00000447601 SLC10A5Q5PT55 438 aa23.1■■□□□ 1.29
FAM3A-215ENST00000447601 FOXD4L3Q6VB84 417 aaPredicted RBP23.1■■□□□ 1.29
FAM3A-215ENST00000447601 RTCBQ9Y3I0 505 aaKnown RBP23.1■■□□□ 1.29
FAM3A-215ENST00000447601 AFF2P51816 1311 aa23.1■■□□□ 1.29
FAM3A-215ENST00000447601 PDE6AP16499 860 aa23.1■■□□□ 1.29
FAM3A-215ENST00000447601 RASGRF1Q13972 1273 aa23.1■■□□□ 1.29
FAM3A-215ENST00000447601 ZSCAN23Q3MJ62 389 aa23.1■■□□□ 1.29
FAM3A-215ENST00000447601 BTAF1O14981 1849 aa23.1■■□□□ 1.29
FAM3A-215ENST00000447601 ZNF532Q9HCE3 1301 aa23.09■■□□□ 1.29
FAM3A-215ENST00000447601 A0A0G2JLW4 131 aa23.09■■□□□ 1.29
FAM3A-215ENST00000447601 BICDL1Q6ZP65 573 aa23.09■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms