RNA–Protein interactions for RNA: ENST00000447360.6

LRRC28-203, Transcript of leucine rich repeat containing 28, humanhuman

TSL 1 (best) BASIC

Gene LRRC28, Length 1,235 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-203ENST00000447360 PTPN22Q9Y2R2 807 aa9.29□□□□□ -0.92
LRRC28-203ENST00000447360 KIAA0100Q14667 2235 aaKnown RBP9.28□□□□□ -0.92
LRRC28-203ENST00000447360 MANSC4A6NHS7 340 aaPredicted RBP9.28□□□□□ -0.92
LRRC28-203ENST00000447360 HSP90B1P14625 803 aaKnown RBP9.28□□□□□ -0.92
LRRC28-203ENST00000447360 EN2P19622 333 aaPredicted RBP9.28□□□□□ -0.92
LRRC28-203ENST00000447360 PTPN12Q05209 780 aaKnown RBP9.28□□□□□ -0.92
LRRC28-203ENST00000447360 TRIM28Q13263 835 aaKnown RBP9.28□□□□□ -0.92
LRRC28-203ENST00000447360 NBPF9Q3BBW0 867 aa9.28□□□□□ -0.92
LRRC28-203ENST00000447360 LDLRAD1Q5T700 205 aa9.28□□□□□ -0.92
LRRC28-203ENST00000447360 IFNL1Q8IU54 200 aa9.28□□□□□ -0.92
LRRC28-203ENST00000447360 OGFOD1Q8N543 542 aa9.28□□□□□ -0.92
LRRC28-203ENST00000447360 PLBD2Q8NHP8 589 aa9.28□□□□□ -0.92
LRRC28-203ENST00000447360 ERO1AQ96HE7 468 aa9.28□□□□□ -0.92
LRRC28-203ENST00000447360 PNNQ9H307 717 aaKnown RBP9.28□□□□□ -0.92
LRRC28-203ENST00000447360 SCAF8Q9UPN6 1271 aaKnown RBP9.28□□□□□ -0.92
LRRC28-203ENST00000447360 CEP290O15078 2479 aa9.27□□□□□ -0.93
LRRC28-203ENST00000447360 WNT10BO00744 389 aa9.27□□□□□ -0.93
LRRC28-203ENST00000447360 IRS4O14654 1257 aaPredicted RBP9.27□□□□□ -0.93
LRRC28-203ENST00000447360 ZBTB48P10074 688 aaPredicted RBP9.27□□□□□ -0.93
LRRC28-203ENST00000447360 ANKRD13DQ6ZTN6 518 aa9.27□□□□□ -0.93
LRRC28-203ENST00000447360 COL6A3P12111 3177 aa9.27□□□□□ -0.93
LRRC28-203ENST00000447360 LAMB2P55268 1798 aa9.27□□□□□ -0.93
LRRC28-203ENST00000447360 TRIOBPQ9H2D6 2365 aa9.27□□□□□ -0.93
LRRC28-203ENST00000447360 UNCXA6NJT0 531 aa9.26□□□□□ -0.93
LRRC28-203ENST00000447360 APOBEC3FQ8IUX4 373 aaKnown RBP9.26□□□□□ -0.93
LRRC28-203ENST00000447360 SLC10A4Q96EP9 437 aa9.26□□□□□ -0.93
LRRC28-203ENST00000447360 TMEM106CQ9BVX2 250 aa9.26□□□□□ -0.93
LRRC28-203ENST00000447360 EFCC1Q9HA90 598 aa9.26□□□□□ -0.93
LRRC28-203ENST00000447360 XDHP47989 1333 aa9.26□□□□□ -0.93
LRRC28-203ENST00000447360 MYO3BQ8WXR4 1341 aa9.26□□□□□ -0.93
LRRC28-203ENST00000447360 CUL9Q8IWT3 2517 aa9.26□□□□□ -0.93
LRRC28-203ENST00000447360 DDX60Q8IY21 1712 aaKnown RBP9.25□□□□□ -0.93
LRRC28-203ENST00000447360 LAMA3Q16787 3333 aa9.25□□□□□ -0.93
LRRC28-203ENST00000447360 ATP5J2-PTCD1G3V325 749 aa9.25□□□□□ -0.93
LRRC28-203ENST00000447360 ATP2B4P23634 1241 aa9.25□□□□□ -0.93
LRRC28-203ENST00000447360 MAP3K11Q16584 847 aa9.25□□□□□ -0.93
LRRC28-203ENST00000447360 RTL5Q5HYW3 569 aaPredicted RBP9.25□□□□□ -0.93
LRRC28-203ENST00000447360 DACT2Q5SW24 774 aa9.25□□□□□ -0.93
LRRC28-203ENST00000447360 OTUD7BQ6GQQ9 843 aa9.25□□□□□ -0.93
LRRC28-203ENST00000447360 NBPF11Q86T75 865 aa9.25□□□□□ -0.93
LRRC28-203ENST00000447360 ZBTB38Q8NAP3 1195 aaPredicted RBP9.25□□□□□ -0.93
LRRC28-203ENST00000447360 ZNF428Q96B54 188 aa9.25□□□□□ -0.93
LRRC28-203ENST00000447360 OTUD5Q96G74 571 aa9.25□□□□□ -0.93
LRRC28-203ENST00000447360 ZNF333Q96JL9 665 aa9.25□□□□□ -0.93
LRRC28-203ENST00000447360 SEC31BQ9NQW1 1179 aa9.25□□□□□ -0.93
LRRC28-203ENST00000447360 ANGEL1Q9UNK9 670 aaKnown RBP9.25□□□□□ -0.93
LRRC28-203ENST00000447360 MAPK8IP3Q9UPT6 1336 aa9.25□□□□□ -0.93
LRRC28-203ENST00000447360 SCN9AQ15858 1988 aa9.24□□□□□ -0.93
LRRC28-203ENST00000447360 TAF1P21675 1872 aa9.24□□□□□ -0.93
LRRC28-203ENST00000447360 IGF2BP3O00425 579 aaKnown RBP eCLIP9.24□□□□□ -0.93
LRRC28-203ENST00000447360 DLL1O00548 723 aa9.24□□□□□ -0.93
LRRC28-203ENST00000447360 SP3Q02447 781 aa9.24□□□□□ -0.93
LRRC28-203ENST00000447360 PRKG1Q13976 671 aa9.24□□□□□ -0.93
LRRC28-203ENST00000447360 ARHGEF6Q15052 776 aa9.24□□□□□ -0.93
LRRC28-203ENST00000447360 CCDC152Q4G0S7 254 aa9.24□□□□□ -0.93
LRRC28-203ENST00000447360 TPRNQ4KMQ1 711 aa9.24□□□□□ -0.93
LRRC28-203ENST00000447360 STRIP1Q5VSL9 837 aa9.24□□□□□ -0.93
LRRC28-203ENST00000447360 CD99L2Q8TCZ2 262 aa9.24□□□□□ -0.93
LRRC28-203ENST00000447360 CHPF2Q9P2E5 772 aa9.24□□□□□ -0.93
LRRC28-203ENST00000447360 DBF4Q9UBU7 674 aaPredicted RBP9.24□□□□□ -0.93
LRRC28-203ENST00000447360 H0YGN5 161 aa9.23□□□□□ -0.93
LRRC28-203ENST00000447360 PPP1R12BO60237 982 aaPredicted RBP9.23□□□□□ -0.93
LRRC28-203ENST00000447360 HOXB7P09629 217 aa9.23□□□□□ -0.93
LRRC28-203ENST00000447360 RIPK4P57078 832 aa9.23□□□□□ -0.93
LRRC28-203ENST00000447360 CRHR2Q13324 411 aa9.23□□□□□ -0.93
LRRC28-203ENST00000447360 SLC17A8Q8NDX2 589 aa9.23□□□□□ -0.93
LRRC28-203ENST00000447360 SPOCK2Q92563 424 aa9.23□□□□□ -0.93
LRRC28-203ENST00000447360 WNK4Q96J92 1243 aa9.23□□□□□ -0.93
LRRC28-203ENST00000447360 DEFB129Q9H1M3 183 aa9.23□□□□□ -0.93
LRRC28-203ENST00000447360 HYPKQ9NX55 129 aa9.23□□□□□ -0.93
LRRC28-203ENST00000447360 MED23Q9ULK4 1368 aa9.23□□□□□ -0.93
LRRC28-203ENST00000447360 COL4A1P02462 1669 aa9.23□□□□□ -0.93
LRRC28-203ENST00000447360 TESPA1A2RU30 521 aaPredicted RBP9.22□□□□□ -0.93
LRRC28-203ENST00000447360 PDE8AO60658 829 aa9.22□□□□□ -0.93
LRRC28-203ENST00000447360 SASH1O94885 1247 aa9.22□□□□□ -0.93
LRRC28-203ENST00000447360 LMOD3Q0VAK6 560 aa9.22□□□□□ -0.93
LRRC28-203ENST00000447360 SLC4A8Q2Y0W8 1093 aa9.22□□□□□ -0.93
LRRC28-203ENST00000447360 SLC9C1Q4G0N8 1177 aa9.22□□□□□ -0.93
LRRC28-203ENST00000447360 HDGFL1Q5TGJ6 251 aa9.22□□□□□ -0.93
LRRC28-203ENST00000447360 ANKRD18AQ8IVF6 992 aa9.22□□□□□ -0.93
LRRC28-203ENST00000447360 ZBED3Q96IU2 234 aaPredicted RBP9.22□□□□□ -0.93
LRRC28-203ENST00000447360 COA1Q9GZY4 146 aa9.22□□□□□ -0.93
LRRC28-203ENST00000447360 PPP2R3BQ9Y5P8 575 aa9.22□□□□□ -0.93
LRRC28-203ENST00000447360 COL1A1P02452 1464 aaPredicted RBP9.21□□□□□ -0.93
LRRC28-203ENST00000447360 CHL1O00533 1208 aa9.21□□□□□ -0.94
LRRC28-203ENST00000447360 SUPT20HL1Q3ZLR7 823 aa9.21□□□□□ -0.94
LRRC28-203ENST00000447360 CCDC191Q8NCU4 936 aa9.21□□□□□ -0.94
LRRC28-203ENST00000447360 CLMNQ96JQ2 1002 aa9.21□□□□□ -0.94
LRRC28-203ENST00000447360 MXD3Q9BW11 206 aa9.21□□□□□ -0.94
LRRC28-203ENST00000447360 RBBP6Q7Z6E9 1792 aaKnown RBP9.21□□□□□ -0.94
LRRC28-203ENST00000447360 WTIPA6NIX2 430 aaPredicted RBP9.2□□□□□ -0.94
LRRC28-203ENST00000447360 PCCAP05165 728 aaPredicted RBP9.2□□□□□ -0.94
LRRC28-203ENST00000447360 CAP1Q01518 475 aa9.2□□□□□ -0.94
LRRC28-203ENST00000447360 KRT24Q2M2I5 525 aa9.2□□□□□ -0.94
LRRC28-203ENST00000447360 TTLL5Q6EMB2 1281 aa9.2□□□□□ -0.94
LRRC28-203ENST00000447360 CHRDL2Q6WN34 429 aa9.2□□□□□ -0.94
LRRC28-203ENST00000447360 RIC3Q7Z5B4 369 aa9.2□□□□□ -0.94
LRRC28-203ENST00000447360 MTMR14Q8NCE2 650 aa9.2□□□□□ -0.94
LRRC28-203ENST00000447360 FBXW7Q969H0 707 aa9.2□□□□□ -0.94
LRRC28-203ENST00000447360 CDC5LQ99459 802 aaKnown RBP9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 113.3 ms