RNA–Protein interactions for RNA: ENST00000447310.5

ZNF550-204, Transcript of zinc finger protein 550, humanhuman

TSL 1 (best)

Gene ZNF550, Length 4,305 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF550-204ENST00000447310 NBPF4Q96M43 638 aa12.92□□□□□ -0.34
ZNF550-204ENST00000447310 LLPHQ9BRT6 129 aaKnown RBP12.92□□□□□ -0.34
ZNF550-204ENST00000447310 RNF216Q9NWF9 866 aaPredicted RBP12.92□□□□□ -0.34
ZNF550-204ENST00000447310 RAI14Q9P0K7 980 aa12.92□□□□□ -0.34
ZNF550-204ENST00000447310 ABCF2Q9UG63 623 aa12.92□□□□□ -0.34
ZNF550-204ENST00000447310 LDHAL6AQ6ZMR3 332 aa12.92□□□□□ -0.34
ZNF550-204ENST00000447310 KIAA1328Q86T90 577 aa12.92□□□□□ -0.34
ZNF550-204ENST00000447310 IP6K1Q92551 441 aa12.92□□□□□ -0.34
ZNF550-204ENST00000447310 NUP88Q99567 741 aaPredicted RBP12.92□□□□□ -0.34
ZNF550-204ENST00000447310 XPO4Q9C0E2 1151 aaKnown RBP12.92□□□□□ -0.34
ZNF550-204ENST00000447310 METP08581 1390 aa12.92□□□□□ -0.34
ZNF550-204ENST00000447310 TUBB4AP04350 444 aa12.92□□□□□ -0.34
ZNF550-204ENST00000447310 EIF5P55010 431 aaKnown RBP12.92□□□□□ -0.34
ZNF550-204ENST00000447310 EVCP57679 992 aa12.92□□□□□ -0.34
ZNF550-204ENST00000447310 TDRD7Q8NHU6 1098 aaKnown RBP12.92□□□□□ -0.34
ZNF550-204ENST00000447310 CARD6Q9BX69 1037 aa12.92□□□□□ -0.34
ZNF550-204ENST00000447310 ATP7BP35670 1465 aa12.91□□□□□ -0.34
ZNF550-204ENST00000447310 RNF113AO15541 343 aaKnown RBP12.91□□□□□ -0.34
ZNF550-204ENST00000447310 ZBTB43O43298 467 aa12.91□□□□□ -0.34
ZNF550-204ENST00000447310 IL15P40933 162 aaPredicted RBP12.91□□□□□ -0.34
ZNF550-204ENST00000447310 FANCCQ00597 558 aa12.91□□□□□ -0.34
ZNF550-204ENST00000447310 CRACR2AQ9BSW2 395 aa12.91□□□□□ -0.34
ZNF550-204ENST00000447310 CPSF1Q10570 1443 aaKnown RBP12.91□□□□□ -0.34
ZNF550-204ENST00000447310 RNF17Q9BXT8 1623 aaKnown RBP12.91□□□□□ -0.34
ZNF550-204ENST00000447310 MYL5Q02045 173 aa12.91□□□□□ -0.34
ZNF550-204ENST00000447310 STIM1Q13586 685 aa12.91□□□□□ -0.34
ZNF550-204ENST00000447310 CCDC196A0A1B0GTZ2 297 aa12.91□□□□□ -0.34
ZNF550-204ENST00000447310 CLSTN1O94985 981 aa12.91□□□□□ -0.34
ZNF550-204ENST00000447310 NAA16Q6N069 864 aaPredicted RBP12.91□□□□□ -0.34
ZNF550-204ENST00000447310 DEF6Q9H4E7 631 aa12.91□□□□□ -0.34
ZNF550-204ENST00000447310 LZTFL1Q9NQ48 299 aa12.91□□□□□ -0.34
ZNF550-204ENST00000447310 ELP1O95163 1332 aa12.9□□□□□ -0.34
ZNF550-204ENST00000447310 PRR36Q9H6K5 1346 aa12.9□□□□□ -0.34
ZNF550-204ENST00000447310 GPTP24298 496 aa12.9□□□□□ -0.34
ZNF550-204ENST00000447310 AFMP43652 599 aa12.9□□□□□ -0.34
ZNF550-204ENST00000447310 ATP2B3Q16720 1220 aa12.9□□□□□ -0.34
ZNF550-204ENST00000447310 AMOTL1Q8IY63 956 aa12.9□□□□□ -0.34
ZNF550-204ENST00000447310 CCDC148Q8NFR7 591 aa12.9□□□□□ -0.34
ZNF550-204ENST00000447310 PRDM11Q9NQV5 511 aa12.9□□□□□ -0.34
ZNF550-204ENST00000447310 TLR7Q9NYK1 1049 aaKnown RBP12.9□□□□□ -0.34
ZNF550-204ENST00000447310 IQGAP1P46940 1657 aa12.9□□□□□ -0.34
ZNF550-204ENST00000447310 CDK12Q9NYV4 1490 aaPredicted RBP12.9□□□□□ -0.34
ZNF550-204ENST00000447310 ZNF202O95125 648 aa12.9□□□□□ -0.34
ZNF550-204ENST00000447310 BRAPQ7Z569 592 aa12.9□□□□□ -0.34
ZNF550-204ENST00000447310 TSPYL1Q9H0U9 437 aa12.9□□□□□ -0.34
ZNF550-204ENST00000447310 TXLNBQ8N3L3 684 aa12.9□□□□□ -0.34
ZNF550-204ENST00000447310 MRFAP1L1Q96HT8 127 aa12.9□□□□□ -0.34
ZNF550-204ENST00000447310 FTOQ9C0B1 505 aaKnown RBP eCLIP12.9□□□□□ -0.34
ZNF550-204ENST00000447310 ZFYP08048 801 aaPredicted RBP12.89□□□□□ -0.35
ZNF550-204ENST00000447310 CCDC181Q5TID7 509 aa12.89□□□□□ -0.35
ZNF550-204ENST00000447310 KBTBD3Q8NAB2 608 aa12.89□□□□□ -0.35
ZNF550-204ENST00000447310 PUF60Q9UHX1 559 aaKnown RBP12.89□□□□□ -0.35
ZNF550-204ENST00000447310 RAD21O60216 631 aa12.89□□□□□ -0.35
ZNF550-204ENST00000447310 NECTIN1Q15223 517 aa12.89□□□□□ -0.35
ZNF550-204ENST00000447310 ANO1Q5XXA6 986 aa12.89□□□□□ -0.35
ZNF550-204ENST00000447310 C11orf57Q6ZUT1 292 aaPredicted RBP12.89□□□□□ -0.35
ZNF550-204ENST00000447310 ZNF589Q86UQ0 364 aaPredicted RBP12.89□□□□□ -0.35
ZNF550-204ENST00000447310 TTC14Q96N46 770 aa12.89□□□□□ -0.35
ZNF550-204ENST00000447310 TULP4Q9NRJ4 1543 aa12.89□□□□□ -0.35
ZNF550-204ENST00000447310 YEATS2Q9ULM3 1422 aa12.89□□□□□ -0.35
ZNF550-204ENST00000447310 QRICH2Q9H0J4 1663 aa12.89□□□□□ -0.35
ZNF550-204ENST00000447310 AK9Q5TCS8 1911 aa12.89□□□□□ -0.35
ZNF550-204ENST00000447310 ZCCHC11Q5TAX3 1644 aaKnown RBP12.89□□□□□ -0.35
ZNF550-204ENST00000447310 N4BP3O15049 544 aa12.89□□□□□ -0.35
ZNF550-204ENST00000447310 KCNA6P17658 529 aa12.89□□□□□ -0.35
ZNF550-204ENST00000447310 GCKRQ14397 625 aa12.89□□□□□ -0.35
ZNF550-204ENST00000447310 NAA30Q147X3 362 aaPredicted RBP12.89□□□□□ -0.35
ZNF550-204ENST00000447310 SLC9C2Q5TAH2 1124 aa12.89□□□□□ -0.35
ZNF550-204ENST00000447310 UTP14CQ5TAP6 766 aaKnown RBP12.89□□□□□ -0.35
ZNF550-204ENST00000447310 GLI2P10070 1586 aa12.88□□□□□ -0.35
ZNF550-204ENST00000447310 TAF5LO75529 589 aa12.88□□□□□ -0.35
ZNF550-204ENST00000447310 STX17P56962 302 aa12.88□□□□□ -0.35
ZNF550-204ENST00000447310 MAP3K12Q12852 859 aa12.88□□□□□ -0.35
ZNF550-204ENST00000447310 BAG1Q99933 345 aaPredicted RBP12.88□□□□□ -0.35
ZNF550-204ENST00000447310 KIAA1468Q9P260 1216 aa12.88□□□□□ -0.35
ZNF550-204ENST00000447310 IMPACTQ9P2X3 320 aa12.88□□□□□ -0.35
ZNF550-204ENST00000447310 GCP02774 474 aa12.88□□□□□ -0.35
ZNF550-204ENST00000447310 ARID5BQ14865 1188 aa12.88□□□□□ -0.35
ZNF550-204ENST00000447310 CHRNA2Q15822 529 aa12.88□□□□□ -0.35
ZNF550-204ENST00000447310 PROSER3Q2NL68 480 aa12.88□□□□□ -0.35
ZNF550-204ENST00000447310 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.88□□□□□ -0.35
ZNF550-204ENST00000447310 PHACTR2O75167 634 aa12.88□□□□□ -0.35
ZNF550-204ENST00000447310 GIGYF1O75420 1035 aaPredicted RBP12.88□□□□□ -0.35
ZNF550-204ENST00000447310 CCDC175P0C221 793 aa12.88□□□□□ -0.35
ZNF550-204ENST00000447310 ATP5JP18859 108 aa12.88□□□□□ -0.35
ZNF550-204ENST00000447310 HELLSQ9NRZ9 838 aa12.88□□□□□ -0.35
ZNF550-204ENST00000447310 ZNF790Q6PG37 636 aa12.87□□□□□ -0.35
ZNF550-204ENST00000447310 KRT28Q7Z3Y7 464 aa12.87□□□□□ -0.35
ZNF550-204ENST00000447310 GOLGA1Q92805 767 aa12.87□□□□□ -0.35
ZNF550-204ENST00000447310 METTL22Q9BUU2 404 aaPredicted RBP12.87□□□□□ -0.35
ZNF550-204ENST00000447310 SCRN1Q12765 414 aa12.87□□□□□ -0.35
ZNF550-204ENST00000447310 POLA2Q14181 598 aa12.87□□□□□ -0.35
ZNF550-204ENST00000447310 SPTLC3Q9NUV7 552 aa12.87□□□□□ -0.35
ZNF550-204ENST00000447310 IGSF1Q8N6C5 1336 aa12.87□□□□□ -0.35
ZNF550-204ENST00000447310 CFAP74Q9C0B2 1584 aa12.87□□□□□ -0.35
ZNF550-204ENST00000447310 IL25Q9H293 177 aa12.87□□□□□ -0.35
ZNF550-204ENST00000447310 RANBP6O60518 1105 aaKnown RBP12.87□□□□□ -0.35
ZNF550-204ENST00000447310 NCBP1Q09161 790 aaKnown RBP12.87□□□□□ -0.35
ZNF550-204ENST00000447310 ADALQ6DHV7 355 aa12.87□□□□□ -0.35
ZNF550-204ENST00000447310 KANK3Q6NY19 840 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 100.2 ms