RNA–Protein interactions for RNA: ENST00000447024.5

SMARCE1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 3

Gene SMARCE1, Length 536 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-206ENST00000447024 KCNH4Q9UQ05 1017 aa11.63□□□□□ -0.55
SMARCE1-206ENST00000447024 IQSEC2Q5JU85 1478 aa11.63□□□□□ -0.55
SMARCE1-206ENST00000447024 GCC2Q8IWJ2 1684 aa11.62□□□□□ -0.55
SMARCE1-206ENST00000447024 IQGAP3Q86VI3 1631 aa11.62□□□□□ -0.55
SMARCE1-206ENST00000447024 M0R2N6 131 aa11.62□□□□□ -0.55
SMARCE1-206ENST00000447024 GRIK4Q16099 956 aa11.62□□□□□ -0.55
SMARCE1-206ENST00000447024 C20orf204Q6ZNR8 217 aa11.62□□□□□ -0.55
SMARCE1-206ENST00000447024 OGFOD1Q8N543 542 aa11.62□□□□□ -0.55
SMARCE1-206ENST00000447024 SUSD3Q96L08 255 aa11.62□□□□□ -0.55
SMARCE1-206ENST00000447024 POLR1AO95602 1720 aaPredicted RBP11.62□□□□□ -0.55
SMARCE1-206ENST00000447024 HFM1A2PYH4 1435 aa11.61□□□□□ -0.55
SMARCE1-206ENST00000447024 SLIT1O75093 1534 aa11.61□□□□□ -0.55
SMARCE1-206ENST00000447024 NUP155O75694 1391 aa11.61□□□□□ -0.55
SMARCE1-206ENST00000447024 NAIPQ13075 1403 aa11.6□□□□□ -0.55
SMARCE1-206ENST00000447024 UBR1Q8IWV7 1749 aa11.6□□□□□ -0.55
SMARCE1-206ENST00000447024 ARHGAP23Q9P227 1491 aa11.6□□□□□ -0.55
SMARCE1-206ENST00000447024 DYRK3O43781 588 aa11.6□□□□□ -0.55
SMARCE1-206ENST00000447024 ATP9BO43861 1147 aa11.6□□□□□ -0.55
SMARCE1-206ENST00000447024 RAD21O60216 631 aa11.6□□□□□ -0.55
SMARCE1-206ENST00000447024 IDI1Q13907 227 aa11.6□□□□□ -0.55
SMARCE1-206ENST00000447024 FOXD4L6Q3SYB3 417 aaPredicted RBP11.6□□□□□ -0.55
SMARCE1-206ENST00000447024 FOXD4L3Q6VB84 417 aaPredicted RBP11.6□□□□□ -0.55
SMARCE1-206ENST00000447024 LARGE2Q8N3Y3 721 aa11.6□□□□□ -0.55
SMARCE1-206ENST00000447024 EID1Q9Y6B2 187 aa11.6□□□□□ -0.55
SMARCE1-206ENST00000447024 SIX5Q8N196 739 aa11.59□□□□□ -0.55
SMARCE1-206ENST00000447024 TSEN2Q8NCE0 465 aaKnown RBP11.59□□□□□ -0.55
SMARCE1-206ENST00000447024 BHMTQ93088 406 aa11.59□□□□□ -0.55
SMARCE1-206ENST00000447024 NPHP4O75161 1426 aaPredicted RBP11.59□□□□□ -0.55
SMARCE1-206ENST00000447024 SYNMO15061 1565 aa11.58□□□□□ -0.55
SMARCE1-206ENST00000447024 NEURL4Q96JN8 1562 aa11.58□□□□□ -0.55
SMARCE1-206ENST00000447024 SCAF11Q99590 1463 aaKnown RBP11.58□□□□□ -0.56
SMARCE1-206ENST00000447024 TMEM2Q9UHN6 1383 aa11.58□□□□□ -0.56
SMARCE1-206ENST00000447024 LTBP4Q8N2S1 1624 aa11.58□□□□□ -0.56
SMARCE1-206ENST00000447024 PALM3A6NDB9 673 aaPredicted RBP11.58□□□□□ -0.56
SMARCE1-206ENST00000447024 PPP1R12BO60237 982 aaPredicted RBP11.58□□□□□ -0.56
SMARCE1-206ENST00000447024 PSMG3-AS1Q96PY0 264 aa11.58□□□□□ -0.56
SMARCE1-206ENST00000447024 MKRN1Q9UHC7 482 aaKnown RBP11.58□□□□□ -0.56
SMARCE1-206ENST00000447024 C21orf2O43822 256 aa11.57□□□□□ -0.56
SMARCE1-206ENST00000447024 HDGFL1Q5TGJ6 251 aa11.57□□□□□ -0.56
SMARCE1-206ENST00000447024 ZNF594Q96JF6 807 aaPredicted RBP11.57□□□□□ -0.56
SMARCE1-206ENST00000447024 PIK3C2BO00750 1634 aa11.57□□□□□ -0.56
SMARCE1-206ENST00000447024 ADGRB3O60242 1522 aa11.56□□□□□ -0.56
SMARCE1-206ENST00000447024 LILRB5O75023 590 aa11.56□□□□□ -0.56
SMARCE1-206ENST00000447024 DKK1O94907 266 aa11.56□□□□□ -0.56
SMARCE1-206ENST00000447024 TBC1D8BQ0IIM8 1120 aa11.56□□□□□ -0.56
SMARCE1-206ENST00000447024 TRAPPC3LQ5T215 181 aa11.56□□□□□ -0.56
SMARCE1-206ENST00000447024 TXNDC2Q86VQ3 553 aa11.56□□□□□ -0.56
SMARCE1-206ENST00000447024 ALDH16A1Q8IZ83 802 aa11.56□□□□□ -0.56
SMARCE1-206ENST00000447024 UBE2OQ9C0C9 1292 aaKnown RBP11.56□□□□□ -0.56
SMARCE1-206ENST00000447024 CPS1P31327 1500 aa11.55□□□□□ -0.56
SMARCE1-206ENST00000447024 SCO2A0A1W2PP80 73 aa11.55□□□□□ -0.56
SMARCE1-206ENST00000447024 BTLAQ7Z6A9 289 aa11.55□□□□□ -0.56
SMARCE1-206ENST00000447024 SLC6A14Q9UN76 642 aa11.55□□□□□ -0.56
SMARCE1-206ENST00000447024 E9PCH4 1651 aa11.55□□□□□ -0.56
SMARCE1-206ENST00000447024 IQGAP1P46940 1657 aa11.55□□□□□ -0.56
SMARCE1-206ENST00000447024 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.54□□□□□ -0.56
SMARCE1-206ENST00000447024 ZNF335Q9H4Z2 1342 aaPredicted RBP11.54□□□□□ -0.56
SMARCE1-206ENST00000447024 A0A0A0MRY4 1105 aa11.53□□□□□ -0.56
SMARCE1-206ENST00000447024 C9orf172C9J069 976 aa11.53□□□□□ -0.56
SMARCE1-206ENST00000447024 STAG2Q8N3U4 1231 aa11.53□□□□□ -0.56
SMARCE1-206ENST00000447024 C2orf49Q9BVC5 232 aaPredicted RBP11.53□□□□□ -0.56
SMARCE1-206ENST00000447024 SELPP16109 830 aa11.52□□□□□ -0.57
SMARCE1-206ENST00000447024 LTKP29376 864 aa11.52□□□□□ -0.57
SMARCE1-206ENST00000447024 ADGRE1Q14246 886 aa11.52□□□□□ -0.57
SMARCE1-206ENST00000447024 MBTPS1Q14703 1052 aa11.52□□□□□ -0.57
SMARCE1-206ENST00000447024 HIF1AQ16665 826 aa11.52□□□□□ -0.57
SMARCE1-206ENST00000447024 PRSS36Q5K4E3 855 aa11.52□□□□□ -0.57
SMARCE1-206ENST00000447024 IGFLR1Q9H665 355 aa11.52□□□□□ -0.57
SMARCE1-206ENST00000447024 JPH1Q9HDC5 661 aaPredicted RBP11.52□□□□□ -0.57
SMARCE1-206ENST00000447024 RBM19Q9Y4C8 960 aaKnown RBP11.52□□□□□ -0.57
SMARCE1-206ENST00000447024 ATAD2Q6PL18 1390 aa11.52□□□□□ -0.57
SMARCE1-206ENST00000447024 TMEM131LA2VDJ0 1609 aa11.51□□□□□ -0.57
SMARCE1-206ENST00000447024 ELNP15502 786 aa11.51□□□□□ -0.57
SMARCE1-206ENST00000447024 NUDT8Q8WV74 236 aa11.51□□□□□ -0.57
SMARCE1-206ENST00000447024 NGLY1Q96IV0 654 aa11.51□□□□□ -0.57
SMARCE1-206ENST00000447024 FLIIQ13045 1269 aa11.5□□□□□ -0.57
SMARCE1-206ENST00000447024 SCG3Q8WXD2 468 aaKnown RBP11.5□□□□□ -0.57
SMARCE1-206ENST00000447024 ZFYVE9O95405 1425 aa11.5□□□□□ -0.57
SMARCE1-206ENST00000447024 SPHKAPQ2M3C7 1700 aa11.49□□□□□ -0.57
SMARCE1-206ENST00000447024 EFCC1Q9HA90 598 aa11.49□□□□□ -0.57
SMARCE1-206ENST00000447024 DNAJB12Q9NXW2 375 aaKnown RBP11.49□□□□□ -0.57
SMARCE1-206ENST00000447024 NAGPAQ9UK23 515 aa11.49□□□□□ -0.57
SMARCE1-206ENST00000447024 PLEKHG1Q9ULL1 1385 aa11.49□□□□□ -0.57
SMARCE1-206ENST00000447024 RAC1P63000 192 aa11.48□□□□□ -0.57
SMARCE1-206ENST00000447024 SHISA2Q6UWI4 295 aa11.48□□□□□ -0.57
SMARCE1-206ENST00000447024 TXNRD3Q86VQ6 643 aa11.48□□□□□ -0.57
SMARCE1-206ENST00000447024 GAS2L2Q8NHY3 880 aa11.48□□□□□ -0.57
SMARCE1-206ENST00000447024 GSX2Q9BZM3 304 aa11.48□□□□□ -0.57
SMARCE1-206ENST00000447024 RIMS2Q9UQ26 1411 aa11.48□□□□□ -0.57
SMARCE1-206ENST00000447024 TRPM2O94759 1503 aa11.48□□□□□ -0.57
SMARCE1-206ENST00000447024 SETD5Q9C0A6 1442 aa11.47□□□□□ -0.57
SMARCE1-206ENST00000447024 RASA1P20936 1047 aa11.47□□□□□ -0.57
SMARCE1-206ENST00000447024 AFF1P51825 1210 aaKnown RBP11.47□□□□□ -0.57
SMARCE1-206ENST00000447024 IER5Q5VY09 327 aa11.47□□□□□ -0.57
SMARCE1-206ENST00000447024 PSAPL1Q6NUJ1 521 aa11.47□□□□□ -0.57
SMARCE1-206ENST00000447024 LENG1Q96BZ8 264 aaPredicted RBP11.47□□□□□ -0.57
SMARCE1-206ENST00000447024 PPP1R15AO75807 674 aaPredicted RBP11.46□□□□□ -0.57
SMARCE1-206ENST00000447024 H2AFB1P0C5Y9 115 aa11.46□□□□□ -0.57
SMARCE1-206ENST00000447024 H2AFB2P0C5Z0 115 aa11.46□□□□□ -0.57
SMARCE1-206ENST00000447024 KCNA6P17658 529 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms