RNA–Protein interactions for RNA: ENST00000446690.2

COL6A4P1-201, Transcript of collagen type VI alpha 4 pseudogene 1, humanhuman

TSL 2 BASIC

Gene COL6A4P1, Length 2,336 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A4P1-201ENST00000446690 DDX49Q9Y6V7 483 aaKnown RBP11.36□□□□□ -0.59
COL6A4P1-201ENST00000446690 RPAP1Q9BWH6 1393 aaPredicted RBP11.35□□□□□ -0.59
COL6A4P1-201ENST00000446690 STK3Q13188 491 aa11.35□□□□□ -0.59
COL6A4P1-201ENST00000446690 TSGA10IPQ3SY00 556 aa11.35□□□□□ -0.59
COL6A4P1-201ENST00000446690 TBC1D9BQ66K14 1250 aa11.35□□□□□ -0.59
COL6A4P1-201ENST00000446690 SRP68Q9UHB9 627 aaKnown RBP11.35□□□□□ -0.59
COL6A4P1-201ENST00000446690 ZPR1O75312 459 aa11.35□□□□□ -0.59
COL6A4P1-201ENST00000446690 IDH1O75874 414 aaKnown RBP11.35□□□□□ -0.59
COL6A4P1-201ENST00000446690 SLC5A1P13866 664 aa11.35□□□□□ -0.59
COL6A4P1-201ENST00000446690 FGD1P98174 961 aa11.35□□□□□ -0.59
COL6A4P1-201ENST00000446690 ANKRD1Q15327 319 aa11.35□□□□□ -0.59
COL6A4P1-201ENST00000446690 DSCC1Q9BVC3 393 aa11.35□□□□□ -0.59
COL6A4P1-201ENST00000446690 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.35□□□□□ -0.59
COL6A4P1-201ENST00000446690 SH2B1Q9NRF2 756 aaPredicted RBP11.35□□□□□ -0.59
COL6A4P1-201ENST00000446690 ANKRD36CQ5JPF3 1778 aa11.34□□□□□ -0.59
COL6A4P1-201ENST00000446690 A0A0G2JLW4 131 aa11.34□□□□□ -0.59
COL6A4P1-201ENST00000446690 ZFYP08048 801 aaPredicted RBP11.34□□□□□ -0.59
COL6A4P1-201ENST00000446690 SEPT12Q8IYM1 358 aa11.34□□□□□ -0.59
COL6A4P1-201ENST00000446690 LRRC2Q9BYS8 371 aa11.34□□□□□ -0.59
COL6A4P1-201ENST00000446690 CNTNAP4Q9C0A0 1308 aa11.34□□□□□ -0.59
COL6A4P1-201ENST00000446690 RPS6KA4O75676 772 aa11.34□□□□□ -0.59
COL6A4P1-201ENST00000446690 PHF14O94880 888 aa11.34□□□□□ -0.59
COL6A4P1-201ENST00000446690 GJB2P29033 226 aa11.34□□□□□ -0.59
COL6A4P1-201ENST00000446690 SLC9C2Q5TAH2 1124 aa11.34□□□□□ -0.59
COL6A4P1-201ENST00000446690 TICAM2Q86XR7 235 aa11.34□□□□□ -0.59
COL6A4P1-201ENST00000446690 CCDC24Q8N4L8 307 aa11.34□□□□□ -0.59
COL6A4P1-201ENST00000446690 PUS7LQ9H0K6 701 aaKnown RBP11.34□□□□□ -0.59
COL6A4P1-201ENST00000446690 RTCBQ9Y3I0 505 aaKnown RBP11.34□□□□□ -0.59
COL6A4P1-201ENST00000446690 WDR33Q9C0J8 1336 aaKnown RBP11.33□□□□□ -0.59
COL6A4P1-201ENST00000446690 MYH14Q7Z406 1995 aaKnown RBP11.33□□□□□ -0.6
COL6A4P1-201ENST00000446690 UQCRFS1P1P0C7P4 283 aa11.33□□□□□ -0.6
COL6A4P1-201ENST00000446690 FGFR2P21802 821 aa11.33□□□□□ -0.6
COL6A4P1-201ENST00000446690 TOB2Q14106 344 aaPredicted RBP11.33□□□□□ -0.6
COL6A4P1-201ENST00000446690 TTF1Q15361 905 aaPredicted RBP11.33□□□□□ -0.6
COL6A4P1-201ENST00000446690 TTLL5Q6EMB2 1281 aa11.33□□□□□ -0.6
COL6A4P1-201ENST00000446690 Q6ZUG5 572 aa11.33□□□□□ -0.6
COL6A4P1-201ENST00000446690 C3orf67Q6ZVT6 689 aa11.33□□□□□ -0.6
COL6A4P1-201ENST00000446690 SETDB2Q96T68 719 aa11.33□□□□□ -0.6
COL6A4P1-201ENST00000446690 PIH1D3Q9NQM4 214 aaKnown RBP11.33□□□□□ -0.6
COL6A4P1-201ENST00000446690 LMBRD1Q9NUN5 540 aa11.33□□□□□ -0.6
COL6A4P1-201ENST00000446690 NPHP1O15259 732 aa11.32□□□□□ -0.6
COL6A4P1-201ENST00000446690 SYT1P21579 422 aa11.32□□□□□ -0.6
COL6A4P1-201ENST00000446690 CHRNDQ07001 517 aa11.32□□□□□ -0.6
COL6A4P1-201ENST00000446690 RC3H1Q5TC82 1133 aaKnown RBP11.32□□□□□ -0.6
COL6A4P1-201ENST00000446690 STOX1Q6ZVD7 989 aa11.32□□□□□ -0.6
COL6A4P1-201ENST00000446690 APPBP2Q92624 585 aa11.32□□□□□ -0.6
COL6A4P1-201ENST00000446690 CDC5LQ99459 802 aaKnown RBP11.32□□□□□ -0.6
COL6A4P1-201ENST00000446690 BCL2L12Q9HB09 334 aa11.32□□□□□ -0.6
COL6A4P1-201ENST00000446690 NARFQ9UHQ1 456 aa11.32□□□□□ -0.6
COL6A4P1-201ENST00000446690 TRPC5Q9UL62 973 aaPredicted RBP11.32□□□□□ -0.6
COL6A4P1-201ENST00000446690 GOLGA6L3A6NEY3 463 aa11.32□□□□□ -0.6
COL6A4P1-201ENST00000446690 STX6O43752 255 aa11.32□□□□□ -0.6
COL6A4P1-201ENST00000446690 BCAMP50895 628 aa11.32□□□□□ -0.6
COL6A4P1-201ENST00000446690 HAND2P61296 217 aa11.32□□□□□ -0.6
COL6A4P1-201ENST00000446690 ZSCAN25Q6NSZ9 544 aa11.32□□□□□ -0.6
COL6A4P1-201ENST00000446690 AMIGO3Q86WK7 504 aa11.32□□□□□ -0.6
COL6A4P1-201ENST00000446690 NBPF5PQ86XG9 351 aaPredicted RBP11.32□□□□□ -0.6
COL6A4P1-201ENST00000446690 ANKRD18AQ8IVF6 992 aa11.32□□□□□ -0.6
COL6A4P1-201ENST00000446690 ZNF512BQ96KM6 892 aaPredicted RBP11.32□□□□□ -0.6
COL6A4P1-201ENST00000446690 QTRT2Q9H974 415 aaKnown RBP11.32□□□□□ -0.6
COL6A4P1-201ENST00000446690 ABCC12Q96J65 1359 aa11.31□□□□□ -0.6
COL6A4P1-201ENST00000446690 E7EWF7 191 aa11.31□□□□□ -0.6
COL6A4P1-201ENST00000446690 APPP05067 770 aa11.31□□□□□ -0.6
COL6A4P1-201ENST00000446690 ST3GAL1Q11201 340 aa11.31□□□□□ -0.6
COL6A4P1-201ENST00000446690 CHST3Q7LGC8 479 aa11.31□□□□□ -0.6
COL6A4P1-201ENST00000446690 SPATA5Q8NB90 893 aa11.31□□□□□ -0.6
COL6A4P1-201ENST00000446690 ARHGEF1Q92888 912 aaKnown RBP11.31□□□□□ -0.6
COL6A4P1-201ENST00000446690 GPAA1O43292 621 aa11.31□□□□□ -0.6
COL6A4P1-201ENST00000446690 ARID4AP29374 1257 aaPredicted RBP11.31□□□□□ -0.6
COL6A4P1-201ENST00000446690 RFC4P35249 363 aa11.31□□□□□ -0.6
COL6A4P1-201ENST00000446690 KLHL40Q2TBA0 621 aa11.31□□□□□ -0.6
COL6A4P1-201ENST00000446690 TPRNQ4KMQ1 711 aa11.31□□□□□ -0.6
COL6A4P1-201ENST00000446690 BRF1Q92994 677 aa11.31□□□□□ -0.6
COL6A4P1-201ENST00000446690 ALDH8A1Q9H2A2 487 aaPredicted RBP11.31□□□□□ -0.6
COL6A4P1-201ENST00000446690 GDPD2Q9HCC8 539 aa11.31□□□□□ -0.6
COL6A4P1-201ENST00000446690 CTNNA3Q9UI47 895 aa11.31□□□□□ -0.6
COL6A4P1-201ENST00000446690 NAP1L2Q9ULW6 460 aaPredicted RBP11.31□□□□□ -0.6
COL6A4P1-201ENST00000446690 ZNF532Q9HCE3 1301 aa11.3□□□□□ -0.6
COL6A4P1-201ENST00000446690 VPS37CA5D8V6 355 aaPredicted RBP11.3□□□□□ -0.6
COL6A4P1-201ENST00000446690 FGAP02671 866 aa11.3□□□□□ -0.6
COL6A4P1-201ENST00000446690 HMGB1P09429 215 aaKnown RBP11.3□□□□□ -0.6
COL6A4P1-201ENST00000446690 ZSCAN22P10073 491 aaPredicted RBP11.3□□□□□ -0.6
COL6A4P1-201ENST00000446690 ADD2P35612 726 aa11.3□□□□□ -0.6
COL6A4P1-201ENST00000446690 RASGRF1Q13972 1273 aa11.3□□□□□ -0.6
COL6A4P1-201ENST00000446690 DHX32Q7L7V1 743 aaKnown RBP11.3□□□□□ -0.6
COL6A4P1-201ENST00000446690 WWC3Q9ULE0 1092 aa11.3□□□□□ -0.6
COL6A4P1-201ENST00000446690 IQSEC3Q9UPP2 1182 aaPredicted RBP11.3□□□□□ -0.6
COL6A4P1-201ENST00000446690 WTIPA6NIX2 430 aaPredicted RBP11.3□□□□□ -0.6
COL6A4P1-201ENST00000446690 IMMTQ16891 758 aaKnown RBP11.3□□□□□ -0.6
COL6A4P1-201ENST00000446690 TRAPPC3LQ5T215 181 aa11.3□□□□□ -0.6
COL6A4P1-201ENST00000446690 LARP1BQ659C4 914 aaKnown RBP11.3□□□□□ -0.6
COL6A4P1-201ENST00000446690 CAVIN1Q6NZI2 390 aaKnown RBP11.3□□□□□ -0.6
COL6A4P1-201ENST00000446690 NLRP3Q96P20 1036 aa11.3□□□□□ -0.6
COL6A4P1-201ENST00000446690 NYXQ9GZU5 481 aa11.3□□□□□ -0.6
COL6A4P1-201ENST00000446690 RREB1Q92766 1687 aa11.29□□□□□ -0.6
COL6A4P1-201ENST00000446690 PDE6AP16499 860 aa11.29□□□□□ -0.6
COL6A4P1-201ENST00000446690 SF3B3Q15393 1217 aaKnown RBP11.29□□□□□ -0.6
COL6A4P1-201ENST00000446690 L1TD1Q5T7N2 865 aaKnown RBP11.29□□□□□ -0.6
COL6A4P1-201ENST00000446690 TPTE2Q6XPS3 522 aa11.29□□□□□ -0.6
COL6A4P1-201ENST00000446690 FAM196AQ6ZSG2 479 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms