RNA–Protein interactions for RNA: ENST00000446349.5

PTPN3-204, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 1 (best) BASIC

Gene PTPN3, Length 8,630 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-204ENST00000446349 NAPAP54920 295 aa9.75□□□□□ -0.85
PTPN3-204ENST00000446349 DPY19L2Q6NUT2 758 aa9.75□□□□□ -0.85
PTPN3-204ENST00000446349 LMBR1LQ6UX01 489 aa9.75□□□□□ -0.85
PTPN3-204ENST00000446349 HACE1Q8IYU2 909 aa9.75□□□□□ -0.85
PTPN3-204ENST00000446349 IVNS1ABPQ9Y6Y0 642 aa9.75□□□□□ -0.85
PTPN3-204ENST00000446349 HS2ST1Q7LGA3 356 aa9.75□□□□□ -0.85
PTPN3-204ENST00000446349 NFATC2IPQ8NCF5 419 aa9.75□□□□□ -0.85
PTPN3-204ENST00000446349 USP8P40818 1118 aa9.75□□□□□ -0.85
PTPN3-204ENST00000446349 STAT6P42226 847 aa9.75□□□□□ -0.85
PTPN3-204ENST00000446349 BMS1Q14692 1282 aaKnown RBP9.75□□□□□ -0.85
PTPN3-204ENST00000446349 NUP88Q99567 741 aaPredicted RBP9.75□□□□□ -0.85
PTPN3-204ENST00000446349 HELLSQ9NRZ9 838 aa9.75□□□□□ -0.85
PTPN3-204ENST00000446349 USP21Q9UK80 565 aa9.75□□□□□ -0.85
PTPN3-204ENST00000446349 PHACTR2O75167 634 aa9.74□□□□□ -0.85
PTPN3-204ENST00000446349 PPM1FP49593 454 aaPredicted RBP9.74□□□□□ -0.85
PTPN3-204ENST00000446349 LUZP1Q86V48 1076 aa9.74□□□□□ -0.85
PTPN3-204ENST00000446349 MICU3Q86XE3 530 aa9.74□□□□□ -0.85
PTPN3-204ENST00000446349 ARID3AQ99856 593 aa9.74□□□□□ -0.85
PTPN3-204ENST00000446349 SLAIN2Q9P270 581 aa9.74□□□□□ -0.85
PTPN3-204ENST00000446349 SAMD9Q5K651 1589 aa9.74□□□□□ -0.85
PTPN3-204ENST00000446349 GSTTP1A0A1W2PQM5 241 aa9.74□□□□□ -0.85
PTPN3-204ENST00000446349 PSMA7O14818 248 aa9.74□□□□□ -0.85
PTPN3-204ENST00000446349 TSPYL1Q9H0U9 437 aa9.74□□□□□ -0.85
PTPN3-204ENST00000446349 SYNCQ9H7C4 482 aa9.74□□□□□ -0.85
PTPN3-204ENST00000446349 FBXO3Q9UK99 471 aa9.74□□□□□ -0.85
PTPN3-204ENST00000446349 SLC9C2Q5TAH2 1124 aa9.74□□□□□ -0.85
PTPN3-204ENST00000446349 ERBB4Q15303 1308 aa9.74□□□□□ -0.85
PTPN3-204ENST00000446349 H7C1D1 291 aa9.74□□□□□ -0.85
PTPN3-204ENST00000446349 TUBB4AP04350 444 aa9.74□□□□□ -0.85
PTPN3-204ENST00000446349 TDRD12Q587J7 1177 aaKnown RBP9.74□□□□□ -0.85
PTPN3-204ENST00000446349 FSIP1Q8NA03 581 aa9.74□□□□□ -0.85
PTPN3-204ENST00000446349 SPC25Q9HBM1 224 aa9.74□□□□□ -0.85
PTPN3-204ENST00000446349 VAT1LQ9HCJ6 419 aa9.74□□□□□ -0.85
PTPN3-204ENST00000446349 MROH5Q6ZUA9 1318 aa9.74□□□□□ -0.85
PTPN3-204ENST00000446349 NLRP1Q9C000 1473 aa9.74□□□□□ -0.85
PTPN3-204ENST00000446349 PRC1O43663 620 aa9.74□□□□□ -0.85
PTPN3-204ENST00000446349 UBE2HP62256 183 aa9.74□□□□□ -0.85
PTPN3-204ENST00000446349 SPC24Q8NBT2 197 aa9.74□□□□□ -0.85
PTPN3-204ENST00000446349 LMBR1Q8WVP7 490 aa9.74□□□□□ -0.85
PTPN3-204ENST00000446349 TCERG1LQ5VWI1 586 aa9.74□□□□□ -0.85
PTPN3-204ENST00000446349 NIM1KQ8IY84 436 aa9.74□□□□□ -0.85
PTPN3-204ENST00000446349 AS3MTQ9HBK9 375 aa9.74□□□□□ -0.85
PTPN3-204ENST00000446349 GPHNQ9NQX3 736 aaPredicted RBP9.74□□□□□ -0.85
PTPN3-204ENST00000446349 RNF113AO15541 343 aaKnown RBP9.73□□□□□ -0.85
PTPN3-204ENST00000446349 MCM4P33991 863 aa9.73□□□□□ -0.85
PTPN3-204ENST00000446349 KRT79Q5XKE5 535 aa9.73□□□□□ -0.85
PTPN3-204ENST00000446349 KIF18AQ8NI77 898 aa9.73□□□□□ -0.85
PTPN3-204ENST00000446349 KDM5DQ9BY66 1539 aa9.73□□□□□ -0.85
PTPN3-204ENST00000446349 IDEP14735 1019 aa9.73□□□□□ -0.85
PTPN3-204ENST00000446349 SLC8A3P57103 927 aa9.73□□□□□ -0.85
PTPN3-204ENST00000446349 GOPCQ9HD26 462 aa9.73□□□□□ -0.85
PTPN3-204ENST00000446349 RPL13P26373 211 aaKnown RBP9.73□□□□□ -0.85
PTPN3-204ENST00000446349 CASQ1P31415 396 aa9.73□□□□□ -0.85
PTPN3-204ENST00000446349 CEP128Q6ZU80 1094 aa9.73□□□□□ -0.85
PTPN3-204ENST00000446349 PPM1EQ8WY54 764 aa9.73□□□□□ -0.85
PTPN3-204ENST00000446349 TRPC5Q9UL62 973 aaPredicted RBP9.73□□□□□ -0.85
PTPN3-204ENST00000446349 AOX1Q06278 1338 aa9.73□□□□□ -0.85
PTPN3-204ENST00000446349 TMEM2Q9UHN6 1383 aa9.73□□□□□ -0.85
PTPN3-204ENST00000446349 NUCB1Q02818 461 aa9.73□□□□□ -0.85
PTPN3-204ENST00000446349 BRAPQ7Z569 592 aa9.73□□□□□ -0.85
PTPN3-204ENST00000446349 POLKQ9UBT6 870 aa9.73□□□□□ -0.85
PTPN3-204ENST00000446349 KRT2P35908 639 aa9.73□□□□□ -0.85
PTPN3-204ENST00000446349 PLS1Q14651 629 aa9.73□□□□□ -0.85
PTPN3-204ENST00000446349 UVSSAQ2YD98 709 aa9.73□□□□□ -0.85
PTPN3-204ENST00000446349 KIAA1524Q8TCG1 905 aa9.73□□□□□ -0.85
PTPN3-204ENST00000446349 MCM9Q9NXL9 1143 aa9.73□□□□□ -0.85
PTPN3-204ENST00000446349 EFCAB6Q5THR3 1501 aa9.72□□□□□ -0.85
PTPN3-204ENST00000446349 KLHL10Q6JEL2 608 aa9.72□□□□□ -0.85
PTPN3-204ENST00000446349 UBXN4Q92575 508 aa9.72□□□□□ -0.85
PTPN3-204ENST00000446349 SELENOOQ9BVL4 669 aa9.72□□□□□ -0.85
PTPN3-204ENST00000446349 IBSPP21815 317 aaPredicted RBP9.72□□□□□ -0.85
PTPN3-204ENST00000446349 DCAF15Q66K64 600 aa9.72□□□□□ -0.85
PTPN3-204ENST00000446349 GABPB2Q8TAK5 448 aaPredicted RBP9.72□□□□□ -0.85
PTPN3-204ENST00000446349 ALG1Q9BT22 464 aa9.72□□□□□ -0.85
PTPN3-204ENST00000446349 HEATR3Q7Z4Q2 680 aa9.72□□□□□ -0.85
PTPN3-204ENST00000446349 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.72□□□□□ -0.85
PTPN3-204ENST00000446349 KLF18A0A0U1RQI7 1052 aa9.72□□□□□ -0.85
PTPN3-204ENST00000446349 CYLC1P35663 651 aaPredicted RBP9.72□□□□□ -0.85
PTPN3-204ENST00000446349 KIF22Q14807 665 aa9.72□□□□□ -0.85
PTPN3-204ENST00000446349 ZNF790Q6PG37 636 aa9.72□□□□□ -0.85
PTPN3-204ENST00000446349 TMEM87BQ96K49 555 aa9.72□□□□□ -0.85
PTPN3-204ENST00000446349 HECW2Q9P2P5 1572 aa9.72□□□□□ -0.85
PTPN3-204ENST00000446349 FSD2A1L4K1 749 aa9.72□□□□□ -0.85
PTPN3-204ENST00000446349 SMARCA5O60264 1052 aaPredicted RBP9.72□□□□□ -0.85
PTPN3-204ENST00000446349 PARP1P09874 1014 aaKnown RBP9.72□□□□□ -0.85
PTPN3-204ENST00000446349 FERP16591 822 aa9.72□□□□□ -0.85
PTPN3-204ENST00000446349 HIBADHP31937 336 aaKnown RBP9.72□□□□□ -0.85
PTPN3-204ENST00000446349 CCDC14Q49A88 953 aa9.72□□□□□ -0.85
PTPN3-204ENST00000446349 DPP8Q6V1X1 898 aaPredicted RBP9.72□□□□□ -0.85
PTPN3-204ENST00000446349 TAX1BP1Q86VP1 789 aa9.72□□□□□ -0.85
PTPN3-204ENST00000446349 COMMD10Q9Y6G5 202 aa9.72□□□□□ -0.85
PTPN3-204ENST00000446349 TRIM75PA6NK02 468 aa9.72□□□□□ -0.85
PTPN3-204ENST00000446349 GRPEL1Q9HAV7 217 aa9.72□□□□□ -0.85
PTPN3-204ENST00000446349 SMTNP53814 917 aa9.72□□□□□ -0.85
PTPN3-204ENST00000446349 TAF12Q16514 161 aa9.72□□□□□ -0.85
PTPN3-204ENST00000446349 METTL22Q9BUU2 404 aaPredicted RBP9.72□□□□□ -0.85
PTPN3-204ENST00000446349 FAM13AO94988 1023 aa9.71□□□□□ -0.85
PTPN3-204ENST00000446349 OTUD7BQ6GQQ9 843 aa9.71□□□□□ -0.85
PTPN3-204ENST00000446349 CHD1O14646 1710 aa9.71□□□□□ -0.85
PTPN3-204ENST00000446349 SYKP43405 635 aa9.71□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms