RNA–Protein interactions for RNA: ENST00000446317.1

SF3A3P1-201, Transcript of splicing factor 3a, subunit 3 pseudogene 1, humanhuman

BASIC

Gene SF3A3P1, Length 1,477 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3P1-201ENST00000446317 GORABQ5T7V8 394 aa9.3□□□□□ -0.92
SF3A3P1-201ENST00000446317 ERICH6BQ5W0A0 696 aa9.3□□□□□ -0.92
SF3A3P1-201ENST00000446317 PI16Q6UXB8 463 aa9.3□□□□□ -0.92
SF3A3P1-201ENST00000446317 ARHGAP27Q6ZUM4 889 aa9.3□□□□□ -0.92
SF3A3P1-201ENST00000446317 MPNDQ8N594 471 aa9.3□□□□□ -0.92
SF3A3P1-201ENST00000446317 VGLL2Q8N8G2 317 aa9.3□□□□□ -0.92
SF3A3P1-201ENST00000446317 TBC1D16Q8TBP0 767 aa9.3□□□□□ -0.92
SF3A3P1-201ENST00000446317 EDC3Q96F86 508 aaKnown RBP9.3□□□□□ -0.92
SF3A3P1-201ENST00000446317 XAGE2Q96GT9 111 aa9.3□□□□□ -0.92
SF3A3P1-201ENST00000446317 MROH5Q6ZUA9 1318 aa9.3□□□□□ -0.92
SF3A3P1-201ENST00000446317 ZNF609O15014 1411 aa9.3□□□□□ -0.92
SF3A3P1-201ENST00000446317 RAB11FIP3O75154 756 aa9.29□□□□□ -0.92
SF3A3P1-201ENST00000446317 PHKA1P46020 1223 aa9.29□□□□□ -0.92
SF3A3P1-201ENST00000446317 CHAF1AQ13111 956 aaPredicted RBP9.29□□□□□ -0.92
SF3A3P1-201ENST00000446317 GPR162Q16538 588 aa9.29□□□□□ -0.92
SF3A3P1-201ENST00000446317 HSP90AB4PQ58FF6 505 aa9.29□□□□□ -0.92
SF3A3P1-201ENST00000446317 ERC1Q8IUD2 1116 aa9.29□□□□□ -0.92
SF3A3P1-201ENST00000446317 SP8Q8IXZ3 490 aa9.29□□□□□ -0.92
SF3A3P1-201ENST00000446317 CLASRPQ8N2M8 674 aaKnown RBP9.29□□□□□ -0.92
SF3A3P1-201ENST00000446317 TMX4Q9H1E5 349 aaPredicted RBP9.29□□□□□ -0.92
SF3A3P1-201ENST00000446317 DBNDD1Q9H9R9 158 aa9.29□□□□□ -0.92
SF3A3P1-201ENST00000446317 DBNLQ9UJU6 430 aaKnown RBP9.29□□□□□ -0.92
SF3A3P1-201ENST00000446317 GGA1Q9UJY5 639 aa9.29□□□□□ -0.92
SF3A3P1-201ENST00000446317 ZNF804BA4D1E1 1349 aa9.29□□□□□ -0.92
SF3A3P1-201ENST00000446317 KIF13BQ9NQT8 1826 aa9.29□□□□□ -0.92
SF3A3P1-201ENST00000446317 SLC5A1P13866 664 aa9.28□□□□□ -0.92
SF3A3P1-201ENST00000446317 PRELPP51888 382 aa9.28□□□□□ -0.92
SF3A3P1-201ENST00000446317 SCARF1Q14162 830 aa9.28□□□□□ -0.92
SF3A3P1-201ENST00000446317 PUM3Q15397 648 aaKnown RBP9.28□□□□□ -0.92
SF3A3P1-201ENST00000446317 CCDC93Q567U6 631 aa9.28□□□□□ -0.92
SF3A3P1-201ENST00000446317 TTC39AQ5SRH9 613 aa9.28□□□□□ -0.92
SF3A3P1-201ENST00000446317 C7orf43Q8WVR3 580 aa9.28□□□□□ -0.92
SF3A3P1-201ENST00000446317 DNAJC2Q99543 621 aaKnown RBP9.28□□□□□ -0.92
SF3A3P1-201ENST00000446317 MXD3Q9BW11 206 aa9.28□□□□□ -0.92
SF3A3P1-201ENST00000446317 BOLA2Q9H3K6 86 aa9.28□□□□□ -0.92
SF3A3P1-201ENST00000446317 KCNQ5Q9NR82 932 aa9.28□□□□□ -0.92
SF3A3P1-201ENST00000446317 XDHP47989 1333 aa9.28□□□□□ -0.92
SF3A3P1-201ENST00000446317 DUOX1Q9NRD9 1551 aa9.28□□□□□ -0.92
SF3A3P1-201ENST00000446317 DLEC1Q9Y238 1755 aa9.28□□□□□ -0.92
SF3A3P1-201ENST00000446317 G3V3G9 751 aa9.28□□□□□ -0.92
SF3A3P1-201ENST00000446317 NFKBIEO00221 500 aa9.28□□□□□ -0.92
SF3A3P1-201ENST00000446317 MYCNP04198 464 aaPredicted RBP9.28□□□□□ -0.92
SF3A3P1-201ENST00000446317 WASHC4Q2M389 1173 aa9.28□□□□□ -0.92
SF3A3P1-201ENST00000446317 DCAF8Q5TAQ9 597 aa9.28□□□□□ -0.92
SF3A3P1-201ENST00000446317 ANKRD2Q9GZV1 360 aa9.28□□□□□ -0.92
SF3A3P1-201ENST00000446317 A0A1B0GUL6 1792 aa9.27□□□□□ -0.93
SF3A3P1-201ENST00000446317 PPIP5K2O43314 1243 aa9.27□□□□□ -0.93
SF3A3P1-201ENST00000446317 FRAT2O75474 233 aaPredicted RBP9.27□□□□□ -0.93
SF3A3P1-201ENST00000446317 CHGBP05060 677 aa9.27□□□□□ -0.93
SF3A3P1-201ENST00000446317 IFIT1P09914 478 aaKnown RBP9.27□□□□□ -0.93
SF3A3P1-201ENST00000446317 MX1P20591 662 aa9.27□□□□□ -0.93
SF3A3P1-201ENST00000446317 FGFR2P21802 821 aa9.27□□□□□ -0.93
SF3A3P1-201ENST00000446317 SLFNL1Q499Z3 407 aa9.27□□□□□ -0.93
SF3A3P1-201ENST00000446317 VPS37DQ86XT2 251 aa9.27□□□□□ -0.93
SF3A3P1-201ENST00000446317 LPIN2Q92539 896 aa9.27□□□□□ -0.93
SF3A3P1-201ENST00000446317 ATP2B4P23634 1241 aa9.26□□□□□ -0.93
SF3A3P1-201ENST00000446317 COL4A5P29400 1685 aa9.26□□□□□ -0.93
SF3A3P1-201ENST00000446317 FKBP4Q02790 459 aaKnown RBP eCLIP9.26□□□□□ -0.93
SF3A3P1-201ENST00000446317 CCDC102BQ68D86 513 aa9.26□□□□□ -0.93
SF3A3P1-201ENST00000446317 TBC1D9Q6ZT07 1266 aa9.26□□□□□ -0.93
SF3A3P1-201ENST00000446317 PLEKHM2Q8IWE5 1019 aa9.26□□□□□ -0.93
SF3A3P1-201ENST00000446317 FAM84BQ96KN1 310 aaPredicted RBP9.26□□□□□ -0.93
SF3A3P1-201ENST00000446317 AKAP2Q9Y2D5 859 aa9.26□□□□□ -0.93
SF3A3P1-201ENST00000446317 LRRC37AA6NMS7 1700 aa9.25□□□□□ -0.93
SF3A3P1-201ENST00000446317 TRIM6-TRIM34B2RNG4 842 aa9.25□□□□□ -0.93
SF3A3P1-201ENST00000446317 F8W031 263 aaPredicted RBP9.25□□□□□ -0.93
SF3A3P1-201ENST00000446317 RAD17O75943 681 aa9.25□□□□□ -0.93
SF3A3P1-201ENST00000446317 HIBADHP31937 336 aaKnown RBP9.25□□□□□ -0.93
SF3A3P1-201ENST00000446317 ZAP70P43403 619 aa9.25□□□□□ -0.93
SF3A3P1-201ENST00000446317 PDE1AP54750 535 aa9.25□□□□□ -0.93
SF3A3P1-201ENST00000446317 LARGE2Q8N3Y3 721 aa9.25□□□□□ -0.93
SF3A3P1-201ENST00000446317 RILPL2Q969X0 211 aa9.25□□□□□ -0.93
SF3A3P1-201ENST00000446317 ZC3H12CQ9C0D7 883 aaKnown RBP9.25□□□□□ -0.93
SF3A3P1-201ENST00000446317 TAOK3Q9H2K8 898 aa9.25□□□□□ -0.93
SF3A3P1-201ENST00000446317 ANTXR1Q9H6X2 564 aa9.25□□□□□ -0.93
SF3A3P1-201ENST00000446317 COL1A1P02452 1464 aaPredicted RBP9.24□□□□□ -0.93
SF3A3P1-201ENST00000446317 IRS2Q9Y4H2 1338 aa9.24□□□□□ -0.93
SF3A3P1-201ENST00000446317 GOLIM4O00461 696 aa9.24□□□□□ -0.93
SF3A3P1-201ENST00000446317 ECE2O60344 883 aa9.24□□□□□ -0.93
SF3A3P1-201ENST00000446317 GSPT1P15170 499 aaKnown RBP9.24□□□□□ -0.93
SF3A3P1-201ENST00000446317 MCAMP43121 646 aa9.24□□□□□ -0.93
SF3A3P1-201ENST00000446317 RASGRF1Q13972 1273 aa9.24□□□□□ -0.93
SF3A3P1-201ENST00000446317 UBE4AQ14139 1066 aa9.24□□□□□ -0.93
SF3A3P1-201ENST00000446317 GRIK5Q16478 980 aa9.24□□□□□ -0.93
SF3A3P1-201ENST00000446317 CAVIN4Q5BKX8 364 aa9.24□□□□□ -0.93
SF3A3P1-201ENST00000446317 ECHDC1Q9NTX5 307 aa9.24□□□□□ -0.93
SF3A3P1-201ENST00000446317 LEMD3Q9Y2U8 911 aa9.24□□□□□ -0.93
SF3A3P1-201ENST00000446317 SNED1Q8TER0 1413 aa9.23□□□□□ -0.93
SF3A3P1-201ENST00000446317 BRCA1P38398 1863 aaKnown RBP9.23□□□□□ -0.93
SF3A3P1-201ENST00000446317 SALL3Q9BXA9 1300 aa9.23□□□□□ -0.93
SF3A3P1-201ENST00000446317 LTBP1Q14766 1721 aa9.23□□□□□ -0.93
SF3A3P1-201ENST00000446317 IARSP41252 1262 aaKnown RBP9.23□□□□□ -0.93
SF3A3P1-201ENST00000446317 GTF2IP78347 998 aa9.23□□□□□ -0.93
SF3A3P1-201ENST00000446317 CCDC158Q5M9N0 1113 aa9.23□□□□□ -0.93
SF3A3P1-201ENST00000446317 TMC4Q7Z404 712 aa9.23□□□□□ -0.93
SF3A3P1-201ENST00000446317 ZNF804AQ7Z570 1209 aa9.23□□□□□ -0.93
SF3A3P1-201ENST00000446317 RTKN2Q8IZC4 609 aa9.23□□□□□ -0.93
SF3A3P1-201ENST00000446317 PI4K2BQ8TCG2 481 aa9.23□□□□□ -0.93
SF3A3P1-201ENST00000446317 PIH1D3Q9NQM4 214 aaKnown RBP9.23□□□□□ -0.93
SF3A3P1-201ENST00000446317 PODXL2Q9NZ53 605 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms