RNA–Protein interactions for RNA: ENST00000445889.5

ERCC3-203, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 2

Gene ERCC3, Length 2,920 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-203ENST00000445889 SMC2O95347 1197 aa16.63■□□□□ 0.25
ERCC3-203ENST00000445889 PDIA3P30101 505 aaKnown RBP16.63■□□□□ 0.25
ERCC3-203ENST00000445889 ELF2Q15723 593 aa16.63■□□□□ 0.25
ERCC3-203ENST00000445889 KLHL34Q8N239 644 aa16.63■□□□□ 0.25
ERCC3-203ENST00000445889 LRRN4CLQ8ND94 238 aa16.63■□□□□ 0.25
ERCC3-203ENST00000445889 RAPGEF4Q8WZA2 1011 aa16.63■□□□□ 0.25
ERCC3-203ENST00000445889 ST7Q9NRC1 585 aa16.63■□□□□ 0.25
ERCC3-203ENST00000445889 HSPD1P10809 573 aaKnown RBP16.63■□□□□ 0.25
ERCC3-203ENST00000445889 CCZ1BP86790 482 aa16.63■□□□□ 0.25
ERCC3-203ENST00000445889 CCZ1P86791 482 aaPredicted RBP16.63■□□□□ 0.25
ERCC3-203ENST00000445889 SF3A1Q15459 793 aaKnown RBP16.63■□□□□ 0.25
ERCC3-203ENST00000445889 KBTBD3Q8NAB2 608 aa16.63■□□□□ 0.25
ERCC3-203ENST00000445889 FEZ1Q99689 392 aa16.63■□□□□ 0.25
ERCC3-203ENST00000445889 SLC52A2Q9HAB3 445 aa16.63■□□□□ 0.25
ERCC3-203ENST00000445889 PAG1Q9NWQ8 432 aa16.63■□□□□ 0.25
ERCC3-203ENST00000445889 ENGASEQ8NFI3 743 aa16.62■□□□□ 0.25
ERCC3-203ENST00000445889 ZNF330Q9Y3S2 320 aaPredicted RBP16.62■□□□□ 0.25
ERCC3-203ENST00000445889 FDPSP14324 419 aaKnown RBP16.62■□□□□ 0.25
ERCC3-203ENST00000445889 KMT5BQ4FZB7 885 aa16.62■□□□□ 0.25
ERCC3-203ENST00000445889 PUS3Q9BZE2 481 aaKnown RBP16.62■□□□□ 0.25
ERCC3-203ENST00000445889 CSB-PGBD3P0DP91 1061 aa16.61■□□□□ 0.25
ERCC3-203ENST00000445889 FAM160A1Q05DH4 1040 aa16.61■□□□□ 0.25
ERCC3-203ENST00000445889 CHRNA2Q15822 529 aa16.61■□□□□ 0.25
ERCC3-203ENST00000445889 GORABQ5T7V8 394 aa16.61■□□□□ 0.25
ERCC3-203ENST00000445889 TTC5Q8N0Z6 440 aa16.61■□□□□ 0.25
ERCC3-203ENST00000445889 GOLGA8FQ08AF8 430 aa16.61■□□□□ 0.25
ERCC3-203ENST00000445889 GOLGA8DPQ0D2H9 430 aa16.61■□□□□ 0.25
ERCC3-203ENST00000445889 HSP90AA4PQ58FG1 418 aa16.61■□□□□ 0.25
ERCC3-203ENST00000445889 IFNKQ9P0W0 207 aa16.61■□□□□ 0.25
ERCC3-203ENST00000445889 CGNQ9P2M7 1197 aaKnown RBP16.61■□□□□ 0.25
ERCC3-203ENST00000445889 DENND2AQ9ULE3 1009 aa16.61■□□□□ 0.25
ERCC3-203ENST00000445889 RXRAP19793 462 aa16.6■□□□□ 0.25
ERCC3-203ENST00000445889 MARCKSP29966 332 aaPredicted RBP16.6■□□□□ 0.25
ERCC3-203ENST00000445889 NBPF11Q86T75 865 aa16.6■□□□□ 0.25
ERCC3-203ENST00000445889 ANO10Q9NW15 660 aa16.6■□□□□ 0.25
ERCC3-203ENST00000445889 ANKARQ7Z5J8 1434 aa16.6■□□□□ 0.25
ERCC3-203ENST00000445889 A0A0U1RQG5 324 aaPredicted RBP16.6■□□□□ 0.25
ERCC3-203ENST00000445889 M0R2C6 588 aa16.6■□□□□ 0.25
ERCC3-203ENST00000445889 TMC6Q7Z403 805 aa16.6■□□□□ 0.25
ERCC3-203ENST00000445889 STK11IPQ8N1F8 1099 aa16.6■□□□□ 0.25
ERCC3-203ENST00000445889 XPO4Q9C0E2 1151 aaKnown RBP16.6■□□□□ 0.25
ERCC3-203ENST00000445889 KIF20AO95235 890 aa16.59■□□□□ 0.25
ERCC3-203ENST00000445889 EXOSC10Q01780 885 aaKnown RBP16.59■□□□□ 0.25
ERCC3-203ENST00000445889 WASHC4Q2M389 1173 aa16.59■□□□□ 0.25
ERCC3-203ENST00000445889 TTLL7Q6ZT98 887 aa16.59■□□□□ 0.25
ERCC3-203ENST00000445889 CEP57L1Q8IYX8 460 aa16.59■□□□□ 0.25
ERCC3-203ENST00000445889 CCAR2Q8N163 923 aaKnown RBP16.59■□□□□ 0.25
ERCC3-203ENST00000445889 MRFAP1L1Q96HT8 127 aa16.59■□□□□ 0.25
ERCC3-203ENST00000445889 AIFM3Q96NN9 605 aa16.59■□□□□ 0.25
ERCC3-203ENST00000445889 ZBTB3Q9H5J0 574 aa16.59■□□□□ 0.25
ERCC3-203ENST00000445889 MARF1Q9Y4F3 1742 aaKnown RBP16.59■□□□□ 0.25
ERCC3-203ENST00000445889 MED1Q15648 1581 aaPredicted RBP16.59■□□□□ 0.25
ERCC3-203ENST00000445889 LMOD1P29536 600 aaPredicted RBP16.59■□□□□ 0.25
ERCC3-203ENST00000445889 STK38Q15208 465 aa16.59■□□□□ 0.25
ERCC3-203ENST00000445889 PI16Q6UXB8 463 aa16.59■□□□□ 0.25
ERCC3-203ENST00000445889 OSBP2Q969R2 916 aa16.59■□□□□ 0.25
ERCC3-203ENST00000445889 ZBTB9Q96C00 473 aa16.59■□□□□ 0.25
ERCC3-203ENST00000445889 DDX41Q9UJV9 622 aaKnown RBP16.59■□□□□ 0.25
ERCC3-203ENST00000445889 NAA16Q6N069 864 aaPredicted RBP16.59■□□□□ 0.25
ERCC3-203ENST00000445889 FBXO38Q6PIJ6 1188 aa16.59■□□□□ 0.25
ERCC3-203ENST00000445889 LRP10Q7Z4F1 713 aa16.59■□□□□ 0.25
ERCC3-203ENST00000445889 KIF18AQ8NI77 898 aa16.59■□□□□ 0.25
ERCC3-203ENST00000445889 LTN1O94822 1766 aa16.58■□□□□ 0.25
ERCC3-203ENST00000445889 IFIT1P09914 478 aaKnown RBP16.58■□□□□ 0.24
ERCC3-203ENST00000445889 ZRSR1Q15695 479 aaKnown RBP16.58■□□□□ 0.24
ERCC3-203ENST00000445889 SYT10Q6XYQ8 523 aa16.58■□□□□ 0.24
ERCC3-203ENST00000445889 ATG9AQ7Z3C6 839 aa16.58■□□□□ 0.24
ERCC3-203ENST00000445889 ZNF396Q96N95 335 aaPredicted RBP16.58■□□□□ 0.24
ERCC3-203ENST00000445889 MAST3O60307 1309 aa16.58■□□□□ 0.24
ERCC3-203ENST00000445889 JCADQ9P266 1359 aa16.58■□□□□ 0.24
ERCC3-203ENST00000445889 SARM1Q6SZW1 724 aa16.58■□□□□ 0.24
ERCC3-203ENST00000445889 NYAP1Q6ZVC0 841 aa16.58■□□□□ 0.24
ERCC3-203ENST00000445889 FMR1NBQ8N0W7 255 aaPredicted RBP16.58■□□□□ 0.24
ERCC3-203ENST00000445889 MRPS27Q92552 414 aaKnown RBP16.58■□□□□ 0.24
ERCC3-203ENST00000445889 SNRPA1P09661 255 aaKnown RBP16.57■□□□□ 0.24
ERCC3-203ENST00000445889 ATP1A3P13637 1013 aa16.57■□□□□ 0.24
ERCC3-203ENST00000445889 PHKG2P15735 406 aa16.57■□□□□ 0.24
ERCC3-203ENST00000445889 CDC25BP30305 580 aa16.57■□□□□ 0.24
ERCC3-203ENST00000445889 RBM6P78332 1123 aaKnown RBP16.57■□□□□ 0.24
ERCC3-203ENST00000445889 ERCC6LQ2NKX8 1250 aa16.57■□□□□ 0.24
ERCC3-203ENST00000445889 TMX1Q9H3N1 280 aa16.57■□□□□ 0.24
ERCC3-203ENST00000445889 E4F1Q66K89 784 aaPredicted RBP16.57■□□□□ 0.24
ERCC3-203ENST00000445889 ARMCX5Q6P1M9 558 aa16.57■□□□□ 0.24
ERCC3-203ENST00000445889 KRT28Q7Z3Y7 464 aa16.57■□□□□ 0.24
ERCC3-203ENST00000445889 FAM177A1Q8N128 213 aaPredicted RBP16.57■□□□□ 0.24
ERCC3-203ENST00000445889 NKX2-3Q8TAU0 364 aa16.57■□□□□ 0.24
ERCC3-203ENST00000445889 CARMIL3Q8ND23 1372 aa16.57■□□□□ 0.24
ERCC3-203ENST00000445889 NFAT5O94916 1531 aa16.57■□□□□ 0.24
ERCC3-203ENST00000445889 CTAGE5O15320 804 aa16.56■□□□□ 0.24
ERCC3-203ENST00000445889 LLPHQ9BRT6 129 aaKnown RBP16.56■□□□□ 0.24
ERCC3-203ENST00000445889 ADGRL3Q9HAR2 1447 aa16.56■□□□□ 0.24
ERCC3-203ENST00000445889 KDM3BQ7LBC6 1761 aa16.56■□□□□ 0.24
ERCC3-203ENST00000445889 A0A1B0GUL7 405 aa16.56■□□□□ 0.24
ERCC3-203ENST00000445889 KIF28PB7ZC32 967 aa16.56■□□□□ 0.24
ERCC3-203ENST00000445889 CAVIN2O95810 425 aa16.56■□□□□ 0.24
ERCC3-203ENST00000445889 A1BGP04217 495 aa16.56■□□□□ 0.24
ERCC3-203ENST00000445889 ADORA1P30542 326 aa16.56■□□□□ 0.24
ERCC3-203ENST00000445889 FOXO4P98177 505 aa16.56■□□□□ 0.24
ERCC3-203ENST00000445889 C8orf76Q96K31 380 aa16.56■□□□□ 0.24
ERCC3-203ENST00000445889 ERBB3P21860 1342 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms