RNA–Protein interactions for RNA: ENST00000445770.3

LINC01949-201, Transcript of long intergenic non-protein coding RNA 1949, humanhuman

TSL 1 (best) BASIC

Gene LINC01949, Length 2,721 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01949-201ENST00000445770 PTF1AQ7RTS3 328 aa11.68□□□□□ -0.54
LINC01949-201ENST00000445770 ISY1Q9ULR0 285 aaKnown RBP11.68□□□□□ -0.54
LINC01949-201ENST00000445770 E7EWF7 191 aa11.67□□□□□ -0.54
LINC01949-201ENST00000445770 TTLL11Q8NHH1 800 aa11.67□□□□□ -0.54
LINC01949-201ENST00000445770 EXOC5O00471 708 aa11.67□□□□□ -0.54
LINC01949-201ENST00000445770 EPB41L2O43491 1005 aaKnown RBP11.67□□□□□ -0.54
LINC01949-201ENST00000445770 PHKA1P46020 1223 aa11.67□□□□□ -0.54
LINC01949-201ENST00000445770 ZMYM1Q5SVZ6 1142 aa11.67□□□□□ -0.54
LINC01949-201ENST00000445770 USPL1Q5W0Q7 1092 aa11.67□□□□□ -0.54
LINC01949-201ENST00000445770 DZIP3Q86Y13 1208 aaKnown RBP11.67□□□□□ -0.54
LINC01949-201ENST00000445770 CCDC144CPQ8IYA2 1237 aa11.67□□□□□ -0.54
LINC01949-201ENST00000445770 GTF3C6Q969F1 213 aa11.67□□□□□ -0.54
LINC01949-201ENST00000445770 ZSCAN31Q96LW9 406 aaPredicted RBP11.67□□□□□ -0.54
LINC01949-201ENST00000445770 PPP1R9BQ96SB3 815 aa11.67□□□□□ -0.54
LINC01949-201ENST00000445770 PARP4Q9UKK3 1724 aaKnown RBP11.67□□□□□ -0.54
LINC01949-201ENST00000445770 TNS2Q63HR2 1409 aa11.67□□□□□ -0.54
LINC01949-201ENST00000445770 PALLDQ8WX93 1383 aa11.67□□□□□ -0.54
LINC01949-201ENST00000445770 MAP3K15Q6ZN16 1313 aa11.67□□□□□ -0.54
LINC01949-201ENST00000445770 RNF113AO15541 343 aaKnown RBP11.66□□□□□ -0.54
LINC01949-201ENST00000445770 CTDNEP1O95476 244 aa11.66□□□□□ -0.54
LINC01949-201ENST00000445770 CLCN1P35523 988 aa11.66□□□□□ -0.54
LINC01949-201ENST00000445770 UBE2HP62256 183 aa11.66□□□□□ -0.54
LINC01949-201ENST00000445770 ATP2B3Q16720 1220 aa11.66□□□□□ -0.54
LINC01949-201ENST00000445770 SLC51AQ86UW1 340 aa11.66□□□□□ -0.54
LINC01949-201ENST00000445770 ZBTB38Q8NAP3 1195 aaPredicted RBP11.66□□□□□ -0.54
LINC01949-201ENST00000445770 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.66□□□□□ -0.54
LINC01949-201ENST00000445770 GIGYF2Q6Y7W6 1299 aaKnown RBP11.66□□□□□ -0.54
LINC01949-201ENST00000445770 U3KPZ7 1027 aaPredicted RBP11.66□□□□□ -0.54
LINC01949-201ENST00000445770 LAMB4A4D0S4 1761 aa11.66□□□□□ -0.54
LINC01949-201ENST00000445770 UBE2Q2LH0YL09 131 aa11.66□□□□□ -0.54
LINC01949-201ENST00000445770 H3BQV1 296 aa11.66□□□□□ -0.54
LINC01949-201ENST00000445770 APPP05067 770 aa11.66□□□□□ -0.54
LINC01949-201ENST00000445770 CCDC158Q5M9N0 1113 aa11.66□□□□□ -0.54
LINC01949-201ENST00000445770 IFFO2Q5TF58 517 aa11.66□□□□□ -0.54
LINC01949-201ENST00000445770 BICDL1Q6ZP65 573 aa11.66□□□□□ -0.54
LINC01949-201ENST00000445770 NUP188Q5SRE5 1749 aa11.65□□□□□ -0.54
LINC01949-201ENST00000445770 AP5Z1O43299 807 aa11.65□□□□□ -0.54
LINC01949-201ENST00000445770 FGAP02671 866 aa11.65□□□□□ -0.54
LINC01949-201ENST00000445770 PTMAP06454 111 aaKnown RBP11.65□□□□□ -0.54
LINC01949-201ENST00000445770 CCDC183Q5T5S1 534 aa11.65□□□□□ -0.54
LINC01949-201ENST00000445770 SENP2Q9HC62 589 aa11.65□□□□□ -0.54
LINC01949-201ENST00000445770 PIH1D3Q9NQM4 214 aaKnown RBP11.65□□□□□ -0.54
LINC01949-201ENST00000445770 DACT1Q9NYF0 836 aa11.65□□□□□ -0.54
LINC01949-201ENST00000445770 HMG20BQ9P0W2 317 aa11.65□□□□□ -0.54
LINC01949-201ENST00000445770 WWC3Q9ULE0 1092 aa11.65□□□□□ -0.54
LINC01949-201ENST00000445770 RIC1Q4ADV7 1423 aa11.65□□□□□ -0.55
LINC01949-201ENST00000445770 PTPDC1A2A3K4 754 aa11.65□□□□□ -0.55
LINC01949-201ENST00000445770 SMIM22K7EJ46 135 aa11.65□□□□□ -0.55
LINC01949-201ENST00000445770 PCCAP05165 728 aaPredicted RBP11.65□□□□□ -0.55
LINC01949-201ENST00000445770 CTSWP56202 376 aa11.65□□□□□ -0.55
LINC01949-201ENST00000445770 FAM184AQ8NB25 1140 aa11.65□□□□□ -0.55
LINC01949-201ENST00000445770 JCADQ9P266 1359 aa11.64□□□□□ -0.55
LINC01949-201ENST00000445770 ABCA3Q99758 1704 aa11.64□□□□□ -0.55
LINC01949-201ENST00000445770 SH3TC1Q8TE82 1336 aa11.64□□□□□ -0.55
LINC01949-201ENST00000445770 UBR2Q8IWV8 1755 aa11.64□□□□□ -0.55
LINC01949-201ENST00000445770 SOCS7O14512 581 aa11.64□□□□□ -0.55
LINC01949-201ENST00000445770 ATP6V1AP38606 617 aa11.64□□□□□ -0.55
LINC01949-201ENST00000445770 SLC9C2Q5TAH2 1124 aa11.64□□□□□ -0.55
LINC01949-201ENST00000445770 SPATA32Q96LK8 384 aa11.64□□□□□ -0.55
LINC01949-201ENST00000445770 GPAA1O43292 621 aa11.64□□□□□ -0.55
LINC01949-201ENST00000445770 NR1I2O75469 434 aa11.64□□□□□ -0.55
LINC01949-201ENST00000445770 MSNP26038 577 aaKnown RBP11.64□□□□□ -0.55
LINC01949-201ENST00000445770 KRT85P78386 507 aa11.64□□□□□ -0.55
LINC01949-201ENST00000445770 ITPK1Q13572 414 aa11.64□□□□□ -0.55
LINC01949-201ENST00000445770 SUSD4Q5VX71 490 aa11.64□□□□□ -0.55
LINC01949-201ENST00000445770 SPC24Q8NBT2 197 aa11.64□□□□□ -0.55
LINC01949-201ENST00000445770 AIFM3Q96NN9 605 aa11.64□□□□□ -0.55
LINC01949-201ENST00000445770 MYL10Q9BUA6 226 aa11.64□□□□□ -0.55
LINC01949-201ENST00000445770 RIPOR2Q9Y4F9 1068 aa11.64□□□□□ -0.55
LINC01949-201ENST00000445770 DHX32Q7L7V1 743 aaKnown RBP11.63□□□□□ -0.55
LINC01949-201ENST00000445770 ZSCAN30Q86W11 494 aa11.63□□□□□ -0.55
LINC01949-201ENST00000445770 KLHL34Q8N239 644 aa11.63□□□□□ -0.55
LINC01949-201ENST00000445770 NSUN7Q8NE18 718 aaKnown RBP11.63□□□□□ -0.55
LINC01949-201ENST00000445770 BICD2Q8TD16 824 aa11.63□□□□□ -0.55
LINC01949-201ENST00000445770 SYAP1Q96A49 352 aaPredicted RBP11.63□□□□□ -0.55
LINC01949-201ENST00000445770 PGBD1Q96JS3 809 aa11.63□□□□□ -0.55
LINC01949-201ENST00000445770 TTC12Q9H892 705 aaPredicted RBP11.63□□□□□ -0.55
LINC01949-201ENST00000445770 ANKRD1Q15327 319 aa11.63□□□□□ -0.55
LINC01949-201ENST00000445770 TMEM87AQ8NBN3 555 aa11.63□□□□□ -0.55
LINC01949-201ENST00000445770 LEO1Q8WVC0 666 aaPredicted RBP11.63□□□□□ -0.55
LINC01949-201ENST00000445770 BCL9O00512 1426 aa11.63□□□□□ -0.55
LINC01949-201ENST00000445770 GOLGA6L4A6NEF3 574 aa11.62□□□□□ -0.55
LINC01949-201ENST00000445770 POLR3DP05423 398 aaPredicted RBP11.62□□□□□ -0.55
LINC01949-201ENST00000445770 LUZP1Q86V48 1076 aa11.62□□□□□ -0.55
LINC01949-201ENST00000445770 MARCH10Q8NA82 808 aaPredicted RBP11.62□□□□□ -0.55
LINC01949-201ENST00000445770 PDLIM2Q96JY6 352 aa11.62□□□□□ -0.55
LINC01949-201ENST00000445770 ATP6V1DQ9Y5K8 247 aa11.62□□□□□ -0.55
LINC01949-201ENST00000445770 SLIT2O94813 1529 aa11.62□□□□□ -0.55
LINC01949-201ENST00000445770 ANKRD18BA2A2Z9 1011 aa11.62□□□□□ -0.55
LINC01949-201ENST00000445770 CSF1RP07333 972 aa11.62□□□□□ -0.55
LINC01949-201ENST00000445770 CRKLP46109 303 aaKnown RBP11.62□□□□□ -0.55
LINC01949-201ENST00000445770 KRT32Q14532 448 aa11.62□□□□□ -0.55
LINC01949-201ENST00000445770 HELLSQ9NRZ9 838 aa11.62□□□□□ -0.55
LINC01949-201ENST00000445770 JAG2Q9Y219 1238 aa11.62□□□□□ -0.55
LINC01949-201ENST00000445770 CIAO1O76071 339 aa11.61□□□□□ -0.55
LINC01949-201ENST00000445770 ADCY5O95622 1261 aa11.61□□□□□ -0.55
LINC01949-201ENST00000445770 PDIA3P30101 505 aaKnown RBP11.61□□□□□ -0.55
LINC01949-201ENST00000445770 DDB1Q16531 1140 aa11.61□□□□□ -0.55
LINC01949-201ENST00000445770 TSGA10IPQ3SY00 556 aa11.61□□□□□ -0.55
LINC01949-201ENST00000445770 CCDC102BQ68D86 513 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms