RNA–Protein interactions for RNA: ENST00000444896.1

HMGB3P6-201, Transcript of high mobility group box 3 pseudogene 6, humanhuman

BASIC

Gene HMGB3P6, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P6-201ENST00000444896 PBX4Q9BYU1 374 aa7.81□□□□□ -1.16
HMGB3P6-201ENST00000444896 OSBPL7Q9BZF2 842 aa7.81□□□□□ -1.16
HMGB3P6-201ENST00000444896 SMG9Q9H0W8 520 aaKnown RBP7.81□□□□□ -1.16
HMGB3P6-201ENST00000444896 SUV39H2Q9H5I1 410 aa7.81□□□□□ -1.16
HMGB3P6-201ENST00000444896 FRRS1LQ9P0K9 344 aa7.81□□□□□ -1.16
HMGB3P6-201ENST00000444896 ALBP02768 609 aa7.8□□□□□ -1.16
HMGB3P6-201ENST00000444896 DAB2P98082 770 aa7.8□□□□□ -1.16
HMGB3P6-201ENST00000444896 GRM2Q14416 872 aa7.8□□□□□ -1.16
HMGB3P6-201ENST00000444896 ELMSAN1Q6PJG2 1045 aa7.8□□□□□ -1.16
HMGB3P6-201ENST00000444896 MICALL1Q8N3F8 863 aa7.8□□□□□ -1.16
HMGB3P6-201ENST00000444896 NUDT8Q8WV74 236 aa7.8□□□□□ -1.16
HMGB3P6-201ENST00000444896 TTC9Q92623 222 aa7.8□□□□□ -1.16
HMGB3P6-201ENST00000444896 NXPE3Q969Y0 559 aa7.8□□□□□ -1.16
HMGB3P6-201ENST00000444896 FAM161BQ96MY7 647 aa7.8□□□□□ -1.16
HMGB3P6-201ENST00000444896 POP1Q99575 1024 aaKnown RBP7.8□□□□□ -1.16
HMGB3P6-201ENST00000444896 NLRP2Q9NX02 1062 aa7.8□□□□□ -1.16
HMGB3P6-201ENST00000444896 RNF225M0QZC1 329 aaPredicted RBP7.79□□□□□ -1.16
HMGB3P6-201ENST00000444896 GNA15P30679 374 aa7.79□□□□□ -1.16
HMGB3P6-201ENST00000444896 FGD1P98174 961 aa7.79□□□□□ -1.16
HMGB3P6-201ENST00000444896 COL9A3Q14050 684 aaPredicted RBP7.79□□□□□ -1.16
HMGB3P6-201ENST00000444896 TMC4Q7Z404 712 aa7.79□□□□□ -1.16
HMGB3P6-201ENST00000444896 TMEM102Q8N9M5 508 aaPredicted RBP7.79□□□□□ -1.16
HMGB3P6-201ENST00000444896 BCO2Q9BYV7 579 aa7.79□□□□□ -1.16
HMGB3P6-201ENST00000444896 EHD4Q9H223 541 aa7.79□□□□□ -1.16
HMGB3P6-201ENST00000444896 ADAMTS8Q9UP79 889 aa7.79□□□□□ -1.16
HMGB3P6-201ENST00000444896 GADD45BO75293 160 aaPredicted RBP7.78□□□□□ -1.16
HMGB3P6-201ENST00000444896 CEP135Q66GS9 1140 aa7.78□□□□□ -1.16
HMGB3P6-201ENST00000444896 KANK3Q6NY19 840 aa7.78□□□□□ -1.16
HMGB3P6-201ENST00000444896 NXPE4Q6UWF7 544 aa7.78□□□□□ -1.16
HMGB3P6-201ENST00000444896 CCNJLQ8IV13 435 aa7.78□□□□□ -1.16
HMGB3P6-201ENST00000444896 SCARF2Q96GP6 870 aaPredicted RBP7.78□□□□□ -1.16
HMGB3P6-201ENST00000444896 RBSNQ9H1K0 784 aa7.78□□□□□ -1.16
HMGB3P6-201ENST00000444896 LIN7BQ9HAP6 207 aa7.78□□□□□ -1.16
HMGB3P6-201ENST00000444896 TRIM33Q9UPN9 1127 aa7.78□□□□□ -1.16
HMGB3P6-201ENST00000444896 AK5Q9Y6K8 562 aa7.78□□□□□ -1.16
HMGB3P6-201ENST00000444896 METTL12A8MUP2 240 aa7.77□□□□□ -1.17
HMGB3P6-201ENST00000444896 M0R082 166 aa7.77□□□□□ -1.17
HMGB3P6-201ENST00000444896 PDE2AO00408 941 aaPredicted RBP7.77□□□□□ -1.17
HMGB3P6-201ENST00000444896 RGS9O75916 674 aaPredicted RBP7.77□□□□□ -1.17
HMGB3P6-201ENST00000444896 GRIA4P48058 902 aa7.77□□□□□ -1.17
HMGB3P6-201ENST00000444896 AFF1P51825 1210 aaKnown RBP7.77□□□□□ -1.17
HMGB3P6-201ENST00000444896 XPCQ01831 940 aaPredicted RBP7.77□□□□□ -1.17
HMGB3P6-201ENST00000444896 ILDR2Q71H61 639 aa7.77□□□□□ -1.17
HMGB3P6-201ENST00000444896 ZNF417Q8TAU3 575 aa7.77□□□□□ -1.17
HMGB3P6-201ENST00000444896 FRMD6Q96NE9 622 aa7.77□□□□□ -1.17
HMGB3P6-201ENST00000444896 ZNF587Q96SQ5 575 aaPredicted RBP7.77□□□□□ -1.17
HMGB3P6-201ENST00000444896 BHLHE41Q9C0J9 482 aaPredicted RBP7.77□□□□□ -1.17
HMGB3P6-201ENST00000444896 JPH1Q9HDC5 661 aaPredicted RBP7.77□□□□□ -1.17
HMGB3P6-201ENST00000444896 PIK3R2O00459 728 aa7.76□□□□□ -1.17
HMGB3P6-201ENST00000444896 GIPC1O14908 333 aa7.76□□□□□ -1.17
HMGB3P6-201ENST00000444896 BAG6P46379 1132 aa7.76□□□□□ -1.17
HMGB3P6-201ENST00000444896 MRPL58Q14197 206 aaKnown RBP7.76□□□□□ -1.17
HMGB3P6-201ENST00000444896 SPRED3Q2MJR0 410 aa7.76□□□□□ -1.17
HMGB3P6-201ENST00000444896 PRPF40BQ6NWY9 871 aaKnown RBP7.76□□□□□ -1.17
HMGB3P6-201ENST00000444896 C12orf49Q9H741 205 aa7.76□□□□□ -1.17
HMGB3P6-201ENST00000444896 ABCB6Q9NP58 842 aa7.76□□□□□ -1.17
HMGB3P6-201ENST00000444896 KIAA1522Q9P206 1035 aaPredicted RBP7.76□□□□□ -1.17
HMGB3P6-201ENST00000444896 SPG7Q9UQ90 795 aa7.76□□□□□ -1.17
HMGB3P6-201ENST00000444896 TMEM238LA0A1B0GVL6 79 aa7.75□□□□□ -1.17
HMGB3P6-201ENST00000444896 SMNDC1O75940 238 aaKnown RBP eCLIP7.75□□□□□ -1.17
HMGB3P6-201ENST00000444896 DGKGP49619 791 aa7.75□□□□□ -1.17
HMGB3P6-201ENST00000444896 PSMD2Q13200 908 aa7.75□□□□□ -1.17
HMGB3P6-201ENST00000444896 BEND7Q8N7W2 519 aaPredicted RBP7.75□□□□□ -1.17
HMGB3P6-201ENST00000444896 ADAM19Q9H013 955 aa7.75□□□□□ -1.17
HMGB3P6-201ENST00000444896 PRDM6Q9NQX0 595 aa7.75□□□□□ -1.17
HMGB3P6-201ENST00000444896 CTSHP09668 335 aa7.74□□□□□ -1.17
HMGB3P6-201ENST00000444896 NID1P14543 1247 aa7.74□□□□□ -1.17
HMGB3P6-201ENST00000444896 RBM25P49756 843 aaKnown RBP7.74□□□□□ -1.17
HMGB3P6-201ENST00000444896 SNRPNP63162 240 aaKnown RBP7.74□□□□□ -1.17
HMGB3P6-201ENST00000444896 LDLRAD1Q5T700 205 aa7.74□□□□□ -1.17
HMGB3P6-201ENST00000444896 GDF6Q6KF10 455 aaPredicted RBP7.74□□□□□ -1.17
HMGB3P6-201ENST00000444896 LINC00114Q6XXX2 140 aa7.74□□□□□ -1.17
HMGB3P6-201ENST00000444896 MRRFQ96E11 262 aaKnown RBP7.74□□□□□ -1.17
HMGB3P6-201ENST00000444896 LACRTQ9GZZ8 138 aa7.74□□□□□ -1.17
HMGB3P6-201ENST00000444896 MKL2Q9ULH7 1088 aa7.74□□□□□ -1.17
HMGB3P6-201ENST00000444896 TRAK1Q9UPV9 953 aa7.74□□□□□ -1.17
HMGB3P6-201ENST00000444896 A0A096LPE4 126 aa7.73□□□□□ -1.17
HMGB3P6-201ENST00000444896 A0A1W2PPZ6 126 aa7.73□□□□□ -1.17
HMGB3P6-201ENST00000444896 LILRB5O75023 590 aa7.73□□□□□ -1.17
HMGB3P6-201ENST00000444896 EIF4BP23588 611 aaKnown RBP7.73□□□□□ -1.17
HMGB3P6-201ENST00000444896 C3orf58Q8NDZ4 430 aa7.73□□□□□ -1.17
HMGB3P6-201ENST00000444896 SRCIN1Q9C0H9 1055 aa7.73□□□□□ -1.17
HMGB3P6-201ENST00000444896 MUC3BQ9H195 1237 aa7.73□□□□□ -1.17
HMGB3P6-201ENST00000444896 SH2B1Q9NRF2 756 aaPredicted RBP7.73□□□□□ -1.17
HMGB3P6-201ENST00000444896 SOX13Q9UN79 622 aa7.73□□□□□ -1.17
HMGB3P6-201ENST00000444896 SORBS3O60504 671 aa7.72□□□□□ -1.17
HMGB3P6-201ENST00000444896 ITPKAP23677 461 aa7.72□□□□□ -1.17
HMGB3P6-201ENST00000444896 FCGRTP55899 365 aa7.72□□□□□ -1.17
HMGB3P6-201ENST00000444896 VN1R5Q7Z5H4 357 aa7.72□□□□□ -1.17
HMGB3P6-201ENST00000444896 IL22RA1Q8N6P7 574 aa7.72□□□□□ -1.17
HMGB3P6-201ENST00000444896 ASAP3Q8TDY4 903 aa7.72□□□□□ -1.17
HMGB3P6-201ENST00000444896 FAM8A1Q9UBU6 413 aa7.72□□□□□ -1.17
HMGB3P6-201ENST00000444896 PTPRAP18433 802 aa7.71□□□□□ -1.18
HMGB3P6-201ENST00000444896 VAMP1P23763 118 aa7.71□□□□□ -1.18
HMGB3P6-201ENST00000444896 MSL1Q68DK7 614 aa7.71□□□□□ -1.18
HMGB3P6-201ENST00000444896 BSNDQ8WZ55 320 aa7.71□□□□□ -1.18
HMGB3P6-201ENST00000444896 PPP4R2Q9NY27 417 aa7.71□□□□□ -1.18
HMGB3P6-201ENST00000444896 USP17L7P0C7H9 530 aa7.7□□□□□ -1.18
HMGB3P6-201ENST00000444896 EPHA1P21709 976 aa7.7□□□□□ -1.18
HMGB3P6-201ENST00000444896 CDC27P30260 824 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms