RNA–Protein interactions for RNA: ENST00000444440.1

SF3A1-203, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 5

Gene SF3A1, Length 777 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-203ENST00000444440 C9orf78Q9NZ63 289 aaPredicted RBP13.78□□□□□ -0.2
SF3A1-203ENST00000444440 ZNF804BA4D1E1 1349 aa13.78□□□□□ -0.2
SF3A1-203ENST00000444440 ADM5C9JUS6 153 aa13.77□□□□□ -0.21
SF3A1-203ENST00000444440 PTPRCP08575 1304 aa13.77□□□□□ -0.21
SF3A1-203ENST00000444440 IFIT5Q13325 482 aaKnown RBP13.77□□□□□ -0.21
SF3A1-203ENST00000444440 KIF4BQ2VIQ3 1234 aa13.77□□□□□ -0.21
SF3A1-203ENST00000444440 DACT2Q5SW24 774 aa13.77□□□□□ -0.21
SF3A1-203ENST00000444440 PODNQ7Z5L7 613 aa13.77□□□□□ -0.21
SF3A1-203ENST00000444440 USP48Q86UV5 1035 aa13.77□□□□□ -0.21
SF3A1-203ENST00000444440 ANKRD44Q8N8A2 993 aa13.77□□□□□ -0.21
SF3A1-203ENST00000444440 ZC3H15Q8WU90 426 aaKnown RBP13.77□□□□□ -0.21
SF3A1-203ENST00000444440 PUS3Q9BZE2 481 aaKnown RBP13.77□□□□□ -0.21
SF3A1-203ENST00000444440 LEMD3Q9Y2U8 911 aa13.77□□□□□ -0.21
SF3A1-203ENST00000444440 USP17L3A6NCW0 530 aa13.76□□□□□ -0.21
SF3A1-203ENST00000444440 USP17L4A6NCW7 530 aa13.76□□□□□ -0.21
SF3A1-203ENST00000444440 ZNF280AP59817 542 aaPredicted RBP13.76□□□□□ -0.21
SF3A1-203ENST00000444440 DEFB115Q30KQ5 88 aa13.76□□□□□ -0.21
SF3A1-203ENST00000444440 ALDH1L2Q3SY69 923 aa13.76□□□□□ -0.21
SF3A1-203ENST00000444440 COL13A1Q5TAT6 717 aaPredicted RBP13.76□□□□□ -0.21
SF3A1-203ENST00000444440 USP17L1Q7RTZ2 530 aa13.76□□□□□ -0.21
SF3A1-203ENST00000444440 AGBL3Q8NEM8 1001 aa13.76□□□□□ -0.21
SF3A1-203ENST00000444440 ANKRD2Q9GZV1 360 aa13.76□□□□□ -0.21
SF3A1-203ENST00000444440 BICC1Q9H694 974 aaKnown RBP13.76□□□□□ -0.21
SF3A1-203ENST00000444440 SMC4Q9NTJ3 1288 aa13.76□□□□□ -0.21
SF3A1-203ENST00000444440 ABT1Q9ULW3 272 aaKnown RBP13.76□□□□□ -0.21
SF3A1-203ENST00000444440 TLL2Q9Y6L7 1015 aa13.76□□□□□ -0.21
SF3A1-203ENST00000444440 AKAP11Q9UKA4 1901 aa13.75□□□□□ -0.21
SF3A1-203ENST00000444440 CELF2O95319 508 aaKnown RBP13.75□□□□□ -0.21
SF3A1-203ENST00000444440 RABL6Q3YEC7 729 aaPredicted RBP13.75□□□□□ -0.21
SF3A1-203ENST00000444440 CYP4F22Q6NT55 531 aa13.75□□□□□ -0.21
SF3A1-203ENST00000444440 COA1Q9GZY4 146 aa13.75□□□□□ -0.21
SF3A1-203ENST00000444440 USP44Q9H0E7 712 aa13.75□□□□□ -0.21
SF3A1-203ENST00000444440 ZNF408Q9H9D4 720 aa13.75□□□□□ -0.21
SF3A1-203ENST00000444440 GGA3Q9NZ52 723 aa13.75□□□□□ -0.21
SF3A1-203ENST00000444440 SCAF8Q9UPN6 1271 aaKnown RBP13.75□□□□□ -0.21
SF3A1-203ENST00000444440 WDR33Q9C0J8 1336 aaKnown RBP13.74□□□□□ -0.21
SF3A1-203ENST00000444440 CCDC57Q2TAC2 916 aa13.74□□□□□ -0.21
SF3A1-203ENST00000444440 DIEXFQ68CQ4 756 aaKnown RBP13.74□□□□□ -0.21
SF3A1-203ENST00000444440 LDHAL6AQ6ZMR3 332 aa13.74□□□□□ -0.21
SF3A1-203ENST00000444440 CDC37L1Q7L3B6 337 aa13.74□□□□□ -0.21
SF3A1-203ENST00000444440 FBXW7Q969H0 707 aa13.74□□□□□ -0.21
SF3A1-203ENST00000444440 CD209Q9NNX6 404 aa13.74□□□□□ -0.21
SF3A1-203ENST00000444440 CASP8AP2Q9UKL3 1982 aa13.73□□□□□ -0.21
SF3A1-203ENST00000444440 FOXN1O15353 648 aa13.73□□□□□ -0.21
SF3A1-203ENST00000444440 PLIN1O60240 522 aa13.73□□□□□ -0.21
SF3A1-203ENST00000444440 USP17L8P0C7I0 530 aa13.73□□□□□ -0.21
SF3A1-203ENST00000444440 SCARF1Q14162 830 aa13.73□□□□□ -0.21
SF3A1-203ENST00000444440 C15orf52Q6ZUT6 534 aaKnown RBP13.73□□□□□ -0.21
SF3A1-203ENST00000444440 KRT26Q7Z3Y9 468 aa13.73□□□□□ -0.21
SF3A1-203ENST00000444440 SAPCD2Q86UD0 394 aa13.73□□□□□ -0.21
SF3A1-203ENST00000444440 CERS5Q8N5B7 392 aa13.73□□□□□ -0.21
SF3A1-203ENST00000444440 KLHDC4Q8TBB5 520 aa13.73□□□□□ -0.21
SF3A1-203ENST00000444440 MYOZ2Q9NPC6 264 aa13.73□□□□□ -0.21
SF3A1-203ENST00000444440 PAPPA2Q9BXP8 1791 aa13.73□□□□□ -0.21
SF3A1-203ENST00000444440 OTOFQ9HC10 1997 aa13.72□□□□□ -0.21
SF3A1-203ENST00000444440 AOC2O75106 756 aa13.72□□□□□ -0.21
SF3A1-203ENST00000444440 KCNJ4P48050 445 aa13.72□□□□□ -0.21
SF3A1-203ENST00000444440 RARSP54136 660 aaKnown RBP13.72□□□□□ -0.21
SF3A1-203ENST00000444440 GTF2IP78347 998 aa13.72□□□□□ -0.21
SF3A1-203ENST00000444440 NBPF9Q3BBW0 867 aa13.72□□□□□ -0.21
SF3A1-203ENST00000444440 LRRC24Q50LG9 513 aa13.72□□□□□ -0.21
SF3A1-203ENST00000444440 TAF7LQ5H9L4 462 aa13.72□□□□□ -0.21
SF3A1-203ENST00000444440 STRIP1Q5VSL9 837 aa13.72□□□□□ -0.21
SF3A1-203ENST00000444440 ANGEL2Q5VTE6 544 aaKnown RBP13.72□□□□□ -0.21
SF3A1-203ENST00000444440 TTLL5Q6EMB2 1281 aa13.72□□□□□ -0.21
SF3A1-203ENST00000444440 CAPNS2Q96L46 248 aa13.72□□□□□ -0.21
SF3A1-203ENST00000444440 CNNM1Q9NRU3 951 aa13.72□□□□□ -0.21
SF3A1-203ENST00000444440 NOB1Q9ULX3 412 aaKnown RBP13.72□□□□□ -0.21
SF3A1-203ENST00000444440 TNNQ9UQP3 1299 aa13.72□□□□□ -0.21
SF3A1-203ENST00000444440 RIPOR2Q9Y4F9 1068 aa13.72□□□□□ -0.21
SF3A1-203ENST00000444440 LAMB1P07942 1786 aa13.71□□□□□ -0.21
SF3A1-203ENST00000444440 BRPF1P55201 1214 aaPredicted RBP13.71□□□□□ -0.21
SF3A1-203ENST00000444440 GRM1Q13255 1194 aa13.71□□□□□ -0.21
SF3A1-203ENST00000444440 IFFO2Q5TF58 517 aa13.71□□□□□ -0.21
SF3A1-203ENST00000444440 WBP1LQ9NX94 342 aa13.71□□□□□ -0.21
SF3A1-203ENST00000444440 JAG2Q9Y219 1238 aa13.71□□□□□ -0.21
SF3A1-203ENST00000444440 PCDHAC2Q9Y5I4 1007 aa13.71□□□□□ -0.21
SF3A1-203ENST00000444440 SASH1O94885 1247 aa13.7□□□□□ -0.22
SF3A1-203ENST00000444440 IL1R1P14778 569 aa13.7□□□□□ -0.22
SF3A1-203ENST00000444440 RFX5P48382 616 aaPredicted RBP13.7□□□□□ -0.22
SF3A1-203ENST00000444440 PAXIP1Q6ZW49 1069 aaPredicted RBP13.7□□□□□ -0.22
SF3A1-203ENST00000444440 KIAA0825Q8IV33 1275 aa13.7□□□□□ -0.22
SF3A1-203ENST00000444440 DCPSQ96C86 337 aaKnown RBP13.7□□□□□ -0.22
SF3A1-203ENST00000444440 ZIC5Q96T25 663 aa13.7□□□□□ -0.22
SF3A1-203ENST00000444440 AOX1Q06278 1338 aa13.69□□□□□ -0.22
SF3A1-203ENST00000444440 WNT10BO00744 389 aa13.69□□□□□ -0.22
SF3A1-203ENST00000444440 CT47B1P0C2W7 299 aaPredicted RBP13.69□□□□□ -0.22
SF3A1-203ENST00000444440 GYG1P46976 350 aa13.69□□□□□ -0.22
SF3A1-203ENST00000444440 VGLL2Q8N8G2 317 aa13.69□□□□□ -0.22
SF3A1-203ENST00000444440 CDCA5Q96FF9 252 aa13.69□□□□□ -0.22
SF3A1-203ENST00000444440 ZBED3Q96IU2 234 aaPredicted RBP13.69□□□□□ -0.22
SF3A1-203ENST00000444440 MYO3BQ8WXR4 1341 aa13.68□□□□□ -0.22
SF3A1-203ENST00000444440 BCAR3O75815 825 aa13.68□□□□□ -0.22
SF3A1-203ENST00000444440 PRAMEF18Q5VWM3 479 aa13.68□□□□□ -0.22
SF3A1-203ENST00000444440 PITPNM2Q9BZ72 1349 aa13.67□□□□□ -0.22
SF3A1-203ENST00000444440 HUNKP57058 714 aa13.67□□□□□ -0.22
SF3A1-203ENST00000444440 UBE4AQ14139 1066 aa13.67□□□□□ -0.22
SF3A1-203ENST00000444440 MOB2Q70IA6 237 aa13.67□□□□□ -0.22
SF3A1-203ENST00000444440 ZNF804AQ7Z570 1209 aa13.67□□□□□ -0.22
SF3A1-203ENST00000444440 SULF1Q8IWU6 871 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms