RNA–Protein interactions for RNA: ENST00000443891.5

CTDSP1-204, Transcript of CTD small phosphatase 1, humanhuman

TSL 3 BASIC

Gene CTDSP1, Length 1,109 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-204ENST00000443891 GRM1Q13255 1194 aa20.79■□□□□ 0.92
CTDSP1-204ENST00000443891 MPHOSPH8Q99549 860 aa20.79■□□□□ 0.92
CTDSP1-204ENST00000443891 MYH3P11055 1940 aa20.78■□□□□ 0.92
CTDSP1-204ENST00000443891 CAPN15O75808 1086 aa20.78■□□□□ 0.92
CTDSP1-204ENST00000443891 STRIP1Q5VSL9 837 aa20.78■□□□□ 0.92
CTDSP1-204ENST00000443891 CCDC102AQ96A19 550 aa20.78■□□□□ 0.92
CTDSP1-204ENST00000443891 GGA3Q9NZ52 723 aa20.78■□□□□ 0.92
CTDSP1-204ENST00000443891 AOC2O75106 756 aa20.77■□□□□ 0.92
CTDSP1-204ENST00000443891 MYOZ2Q9NPC6 264 aa20.77■□□□□ 0.92
CTDSP1-204ENST00000443891 SCN9AQ15858 1988 aa20.77■□□□□ 0.92
CTDSP1-204ENST00000443891 ANKRD18BA2A2Z9 1011 aa20.76■□□□□ 0.91
CTDSP1-204ENST00000443891 FKBP1BP68106 108 aa20.76■□□□□ 0.91
CTDSP1-204ENST00000443891 SCARF1Q14162 830 aa20.76■□□□□ 0.91
CTDSP1-204ENST00000443891 RGMBQ6NW40 437 aa20.76■□□□□ 0.91
CTDSP1-204ENST00000443891 OGFOD1Q8N543 542 aa20.76■□□□□ 0.91
CTDSP1-204ENST00000443891 PSME4Q14997 1843 aa20.76■□□□□ 0.91
CTDSP1-204ENST00000443891 ZNF804BA4D1E1 1349 aa20.76■□□□□ 0.91
CTDSP1-204ENST00000443891 BEND3Q5T5X7 828 aa20.75■□□□□ 0.91
CTDSP1-204ENST00000443891 SALL2Q9Y467 1007 aaPredicted RBP20.75■□□□□ 0.91
CTDSP1-204ENST00000443891 ADM5C9JUS6 153 aa20.74■□□□□ 0.91
CTDSP1-204ENST00000443891 FAM161AQ3B820 660 aa20.74■□□□□ 0.91
CTDSP1-204ENST00000443891 DACT2Q5SW24 774 aa20.74■□□□□ 0.91
CTDSP1-204ENST00000443891 IFIT5Q13325 482 aaKnown RBP20.73■□□□□ 0.91
CTDSP1-204ENST00000443891 ANGEL2Q5VTE6 544 aaKnown RBP20.73■□□□□ 0.91
CTDSP1-204ENST00000443891 C15orf52Q6ZUT6 534 aaKnown RBP20.73■□□□□ 0.91
CTDSP1-204ENST00000443891 REM2Q8IYK8 340 aaPredicted RBP20.73■□□□□ 0.91
CTDSP1-204ENST00000443891 CDCA5Q96FF9 252 aa20.72■□□□□ 0.91
CTDSP1-204ENST00000443891 FAM155AB1AL88 458 aaPredicted RBP20.71■□□□□ 0.91
CTDSP1-204ENST00000443891 ALDH1L1O75891 902 aa20.71■□□□□ 0.91
CTDSP1-204ENST00000443891 KCNJ4P48050 445 aa20.71■□□□□ 0.91
CTDSP1-204ENST00000443891 CHRNDQ07001 517 aa20.71■□□□□ 0.91
CTDSP1-204ENST00000443891 TTLL5Q6EMB2 1281 aa20.71■□□□□ 0.91
CTDSP1-204ENST00000443891 FAM9BQ8IZU0 186 aa20.71■□□□□ 0.91
CTDSP1-204ENST00000443891 SPINK5Q9NQ38 1064 aaPredicted RBP20.71■□□□□ 0.91
CTDSP1-204ENST00000443891 SAGE1Q9NXZ1 904 aa20.71■□□□□ 0.91
CTDSP1-204ENST00000443891 ZNF157P51786 506 aaPredicted RBP20.7■□□□□ 0.9
CTDSP1-204ENST00000443891 FOXO4P98177 505 aa20.7■□□□□ 0.9
CTDSP1-204ENST00000443891 HDAC9Q9UKV0 1011 aa20.7■□□□□ 0.9
CTDSP1-204ENST00000443891 WTIPA6NIX2 430 aaPredicted RBP20.69■□□□□ 0.9
CTDSP1-204ENST00000443891 F6X3S4 739 aa20.69■□□□□ 0.9
CTDSP1-204ENST00000443891 GRM8O00222 908 aa20.69■□□□□ 0.9
CTDSP1-204ENST00000443891 DLK2Q6UY11 383 aa20.69■□□□□ 0.9
CTDSP1-204ENST00000443891 TXNRD3Q86VQ6 643 aa20.69■□□□□ 0.9
CTDSP1-204ENST00000443891 ABHD8Q96I13 439 aa20.69■□□□□ 0.9
CTDSP1-204ENST00000443891 SLC10A3P09131 477 aa20.68■□□□□ 0.9
CTDSP1-204ENST00000443891 CCDC57Q2TAC2 916 aa20.68■□□□□ 0.9
CTDSP1-204ENST00000443891 CD209Q9NNX6 404 aa20.68■□□□□ 0.9
CTDSP1-204ENST00000443891 C9orf78Q9NZ63 289 aaPredicted RBP20.68■□□□□ 0.9
CTDSP1-204ENST00000443891 ASTN2O75129 1339 aaPredicted RBP20.68■□□□□ 0.9
CTDSP1-204ENST00000443891 ZNF521Q96K83 1311 aa20.68■□□□□ 0.9
CTDSP1-204ENST00000443891 POLR2AP24928 1970 aaKnown RBP20.67■□□□□ 0.9
CTDSP1-204ENST00000443891 WNT10BO00744 389 aa20.67■□□□□ 0.9
CTDSP1-204ENST00000443891 SRCIN1Q9C0H9 1055 aa20.67■□□□□ 0.9
CTDSP1-204ENST00000443891 NF2P35240 595 aa20.66■□□□□ 0.9
CTDSP1-204ENST00000443891 FKBP1AP62942 108 aaKnown RBP20.66■□□□□ 0.9
CTDSP1-204ENST00000443891 LMBR1LQ6UX01 489 aa20.66■□□□□ 0.9
CTDSP1-204ENST00000443891 ZNF804AQ7Z570 1209 aa20.66■□□□□ 0.9
CTDSP1-204ENST00000443891 FBXW7Q969H0 707 aa20.66■□□□□ 0.9
CTDSP1-204ENST00000443891 IRS2Q9Y4H2 1338 aa20.65■□□□□ 0.9
CTDSP1-204ENST00000443891 GTF2IP78347 998 aa20.65■□□□□ 0.9
CTDSP1-204ENST00000443891 KIF23Q02241 960 aaPredicted RBP20.65■□□□□ 0.9
CTDSP1-204ENST00000443891 NBPF9Q3BBW0 867 aa20.65■□□□□ 0.9
CTDSP1-204ENST00000443891 LDHAL6AQ6ZMR3 332 aa20.65■□□□□ 0.9
CTDSP1-204ENST00000443891 CHMP3Q9Y3E7 222 aa20.65■□□□□ 0.9
CTDSP1-204ENST00000443891 SPEF2Q9C093 1822 aa20.64■□□□□ 0.9
CTDSP1-204ENST00000443891 PAPPA2Q9BXP8 1791 aa20.64■□□□□ 0.9
CTDSP1-204ENST00000443891 IL1R1P14778 569 aa20.64■□□□□ 0.89
CTDSP1-204ENST00000443891 TAF7LQ5H9L4 462 aa20.64■□□□□ 0.89
CTDSP1-204ENST00000443891 APOBEC3FQ8IUX4 373 aaKnown RBP20.64■□□□□ 0.89
CTDSP1-204ENST00000443891 MTMR14Q8NCE2 650 aa20.64■□□□□ 0.89
CTDSP1-204ENST00000443891 ZBED3Q96IU2 234 aaPredicted RBP20.64■□□□□ 0.89
CTDSP1-204ENST00000443891 ZIC5Q96T25 663 aa20.64■□□□□ 0.89
CTDSP1-204ENST00000443891 KLRK1P26718 216 aa20.63■□□□□ 0.89
CTDSP1-204ENST00000443891 MXD3Q9BW11 206 aa20.63■□□□□ 0.89
CTDSP1-204ENST00000443891 TSKSQ9UJT2 592 aa20.63■□□□□ 0.89
CTDSP1-204ENST00000443891 UTYO14607 1347 aa20.62■□□□□ 0.89
CTDSP1-204ENST00000443891 PTPRCP08575 1304 aa20.62■□□□□ 0.89
CTDSP1-204ENST00000443891 E9PSI1 815 aa20.62■□□□□ 0.89
CTDSP1-204ENST00000443891 TAF5LO75529 589 aa20.62■□□□□ 0.89
CTDSP1-204ENST00000443891 RASAL3Q86YV0 1011 aa20.62■□□□□ 0.89
CTDSP1-204ENST00000443891 KIAA0825Q8IV33 1275 aa20.62■□□□□ 0.89
CTDSP1-204ENST00000443891 CNNM1Q9NRU3 951 aa20.62■□□□□ 0.89
CTDSP1-204ENST00000443891 COL1A1P02452 1464 aaPredicted RBP20.62■□□□□ 0.89
CTDSP1-204ENST00000443891 UBE4AQ14139 1066 aa20.61■□□□□ 0.89
CTDSP1-204ENST00000443891 EPHA10Q5JZY3 1008 aa20.61■□□□□ 0.89
CTDSP1-204ENST00000443891 SLC4A10Q6U841 1118 aa20.61■□□□□ 0.89
CTDSP1-204ENST00000443891 CSRNP1Q96S65 589 aa20.61■□□□□ 0.89
CTDSP1-204ENST00000443891 ZNF646O15015 1829 aaPredicted RBP20.6■□□□□ 0.89
CTDSP1-204ENST00000443891 DLGAP5Q15398 846 aa20.6■□□□□ 0.89
CTDSP1-204ENST00000443891 HELBQ8NG08 1087 aaPredicted RBP20.6■□□□□ 0.89
CTDSP1-204ENST00000443891 RNF186Q9NXI6 227 aa20.6■□□□□ 0.89
CTDSP1-204ENST00000443891 PPP2R3BQ9Y5P8 575 aa20.6■□□□□ 0.89
CTDSP1-204ENST00000443891 SASH1O94885 1247 aa20.59■□□□□ 0.89
CTDSP1-204ENST00000443891 ARMC9Q7Z3E5 817 aa20.59■□□□□ 0.89
CTDSP1-204ENST00000443891 MYO1BO43795 1136 aa20.58■□□□□ 0.89
CTDSP1-204ENST00000443891 RABL6Q3YEC7 729 aaPredicted RBP20.58■□□□□ 0.89
CTDSP1-204ENST00000443891 MRPL50Q8N5N7 158 aaKnown RBP20.58■□□□□ 0.89
CTDSP1-204ENST00000443891 MCOLN1Q9GZU1 580 aa20.58■□□□□ 0.89
CTDSP1-204ENST00000443891 FAM205AQ6ZU69 1335 aa20.57■□□□□ 0.88
CTDSP1-204ENST00000443891 MROH5Q6ZUA9 1318 aa20.57■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms