RNA–Protein interactions for RNA: ENST00000443206.2

TOM1-208, Transcript of target of myb1 membrane trafficking protein, humanhuman

TSL 4

Gene TOM1, Length 567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-208ENST00000443206 TMEM88BA6NKF7 163 aa16.46■□□□□ 0.23
TOM1-208ENST00000443206 UBTFL1P0CB47 393 aaPredicted RBP16.46■□□□□ 0.23
TOM1-208ENST00000443206 TXNRD3Q86VQ6 643 aa16.46■□□□□ 0.23
TOM1-208ENST00000443206 ANKRD44Q8N8A2 993 aa16.46■□□□□ 0.23
TOM1-208ENST00000443206 FRAT1Q92837 279 aaPredicted RBP16.46■□□□□ 0.23
TOM1-208ENST00000443206 BCAR3O75815 825 aa16.45■□□□□ 0.22
TOM1-208ENST00000443206 HIRAP54198 1017 aaPredicted RBP16.45■□□□□ 0.22
TOM1-208ENST00000443206 RBM26Q5T8P6 1007 aaKnown RBP16.45■□□□□ 0.22
TOM1-208ENST00000443206 SAMD7Q7Z3H4 446 aa16.45■□□□□ 0.22
TOM1-208ENST00000443206 TRPM4Q8TD43 1214 aa16.45■□□□□ 0.22
TOM1-208ENST00000443206 FBXW7Q969H0 707 aa16.45■□□□□ 0.22
TOM1-208ENST00000443206 PGAP2Q9UHJ9 254 aa16.45■□□□□ 0.22
TOM1-208ENST00000443206 A0A1B0GUL6 1792 aa16.45■□□□□ 0.22
TOM1-208ENST00000443206 TRPM7Q96QT4 1865 aa16.45■□□□□ 0.22
TOM1-208ENST00000443206 SNAP23O00161 211 aa16.44■□□□□ 0.22
TOM1-208ENST00000443206 KLRK1P26718 216 aa16.44■□□□□ 0.22
TOM1-208ENST00000443206 TBC1D10BQ4KMP7 808 aaPredicted RBP16.44■□□□□ 0.22
TOM1-208ENST00000443206 STRIP1Q5VSL9 837 aa16.44■□□□□ 0.22
TOM1-208ENST00000443206 TTLL5Q6EMB2 1281 aa16.44■□□□□ 0.22
TOM1-208ENST00000443206 C15orf52Q6ZUT6 534 aaKnown RBP16.44■□□□□ 0.22
TOM1-208ENST00000443206 PUS3Q9BZE2 481 aaKnown RBP16.44■□□□□ 0.22
TOM1-208ENST00000443206 MROH5Q6ZUA9 1318 aa16.44■□□□□ 0.22
TOM1-208ENST00000443206 USP17L8P0C7I0 530 aa16.43■□□□□ 0.22
TOM1-208ENST00000443206 UBE4AQ14139 1066 aa16.43■□□□□ 0.22
TOM1-208ENST00000443206 INTS3Q68E01 1043 aaKnown RBP16.43■□□□□ 0.22
TOM1-208ENST00000443206 ATF7IPQ6VMQ6 1270 aa16.43■□□□□ 0.22
TOM1-208ENST00000443206 CDC37L1Q7L3B6 337 aa16.43■□□□□ 0.22
TOM1-208ENST00000443206 ZNF804AQ7Z570 1209 aa16.43■□□□□ 0.22
TOM1-208ENST00000443206 CD209Q9NNX6 404 aa16.43■□□□□ 0.22
TOM1-208ENST00000443206 RIPOR2Q9Y4F9 1068 aa16.43■□□□□ 0.22
TOM1-208ENST00000443206 MYO3BQ8WXR4 1341 aa16.43■□□□□ 0.22
TOM1-208ENST00000443206 KIF4BQ2VIQ3 1234 aa16.42■□□□□ 0.22
TOM1-208ENST00000443206 DACT2Q5SW24 774 aa16.42■□□□□ 0.22
TOM1-208ENST00000443206 OGFOD1Q8N543 542 aa16.42■□□□□ 0.22
TOM1-208ENST00000443206 GMLQ99445 158 aa16.42■□□□□ 0.22
TOM1-208ENST00000443206 ZNF609O15014 1411 aa16.42■□□□□ 0.22
TOM1-208ENST00000443206 EGFRP00533 1210 aa16.41■□□□□ 0.22
TOM1-208ENST00000443206 GNAI3P08754 354 aa16.41■□□□□ 0.22
TOM1-208ENST00000443206 TRIM27P14373 513 aa16.41■□□□□ 0.22
TOM1-208ENST00000443206 ZNF280AP59817 542 aaPredicted RBP16.41■□□□□ 0.22
TOM1-208ENST00000443206 GTF2IP78347 998 aa16.41■□□□□ 0.22
TOM1-208ENST00000443206 METTL24Q5JXM2 366 aa16.41■□□□□ 0.22
TOM1-208ENST00000443206 ZKSCAN2Q63HK3 967 aa16.41■□□□□ 0.22
TOM1-208ENST00000443206 DCPSQ96C86 337 aaKnown RBP16.41■□□□□ 0.22
TOM1-208ENST00000443206 TRAF5O00463 557 aa16.4■□□□□ 0.22
TOM1-208ENST00000443206 MMP14P50281 582 aa16.4■□□□□ 0.22
TOM1-208ENST00000443206 LRRC24Q50LG9 513 aa16.4■□□□□ 0.22
TOM1-208ENST00000443206 JMYQ8N9B5 988 aa16.4■□□□□ 0.22
TOM1-208ENST00000443206 KLHDC4Q8TBB5 520 aa16.4■□□□□ 0.22
TOM1-208ENST00000443206 CLUAP1Q96AJ1 413 aa16.4■□□□□ 0.22
TOM1-208ENST00000443206 GLIS2Q9BZE0 524 aaPredicted RBP16.4■□□□□ 0.22
TOM1-208ENST00000443206 MKRN1Q9UHC7 482 aaKnown RBP16.4■□□□□ 0.22
TOM1-208ENST00000443206 LRRFIP2Q9Y608 721 aaKnown RBP16.4■□□□□ 0.22
TOM1-208ENST00000443206 IRS2Q9Y4H2 1338 aa16.4■□□□□ 0.22
TOM1-208ENST00000443206 IL1R1P14778 569 aa16.39■□□□□ 0.21
TOM1-208ENST00000443206 FMR1Q06787 632 aaKnown RBP eCLIP16.39■□□□□ 0.21
TOM1-208ENST00000443206 MEIS3Q99687 375 aa16.39■□□□□ 0.21
TOM1-208ENST00000443206 MXD3Q9BW11 206 aa16.39■□□□□ 0.21
TOM1-208ENST00000443206 MYOZ2Q9NPC6 264 aa16.39■□□□□ 0.21
TOM1-208ENST00000443206 ABT1Q9ULW3 272 aaKnown RBP16.39■□□□□ 0.21
TOM1-208ENST00000443206 PDE8BO95263 885 aa16.38■□□□□ 0.21
TOM1-208ENST00000443206 HIBADHP31937 336 aaKnown RBP16.38■□□□□ 0.21
TOM1-208ENST00000443206 DEFB115Q30KQ5 88 aa16.38■□□□□ 0.21
TOM1-208ENST00000443206 KRT26Q7Z3Y9 468 aa16.38■□□□□ 0.21
TOM1-208ENST00000443206 USP48Q86UV5 1035 aa16.38■□□□□ 0.21
TOM1-208ENST00000443206 HDAC9Q9UKV0 1011 aa16.38■□□□□ 0.21
TOM1-208ENST00000443206 PCNTO95613 3336 aa16.37■□□□□ 0.21
TOM1-208ENST00000443206 EYA2O00167 538 aa16.37■□□□□ 0.21
TOM1-208ENST00000443206 CELF2O95319 508 aaKnown RBP16.37■□□□□ 0.21
TOM1-208ENST00000443206 RFX5P48382 616 aaPredicted RBP16.37■□□□□ 0.21
TOM1-208ENST00000443206 PTPN12Q05209 780 aaKnown RBP16.37■□□□□ 0.21
TOM1-208ENST00000443206 SCARF1Q14162 830 aa16.37■□□□□ 0.21
TOM1-208ENST00000443206 CAVIN4Q5BKX8 364 aa16.37■□□□□ 0.21
TOM1-208ENST00000443206 CST9Q5W186 159 aa16.37■□□□□ 0.21
TOM1-208ENST00000443206 VPS37DQ86XT2 251 aa16.37■□□□□ 0.21
TOM1-208ENST00000443206 SULF1Q8IWU6 871 aa16.37■□□□□ 0.21
TOM1-208ENST00000443206 ZNF408Q9H9D4 720 aa16.37■□□□□ 0.21
TOM1-208ENST00000443206 FBXO3Q9UK99 471 aa16.37■□□□□ 0.21
TOM1-208ENST00000443206 ZNF646O15015 1829 aaPredicted RBP16.37■□□□□ 0.21
TOM1-208ENST00000443206 CNTNAP1P78357 1384 aa16.37■□□□□ 0.21
TOM1-208ENST00000443206 SASH1O94885 1247 aa16.36■□□□□ 0.21
TOM1-208ENST00000443206 GYG1P46976 350 aa16.36■□□□□ 0.21
TOM1-208ENST00000443206 KIAA0825Q8IV33 1275 aa16.36■□□□□ 0.21
TOM1-208ENST00000443206 FAM84BQ96KN1 310 aaPredicted RBP16.36■□□□□ 0.21
TOM1-208ENST00000443206 GGA3Q9NZ52 723 aa16.36■□□□□ 0.21
TOM1-208ENST00000443206 TNNQ9UQP3 1299 aa16.36■□□□□ 0.21
TOM1-208ENST00000443206 RASSF10A6NK89 507 aa16.35■□□□□ 0.21
TOM1-208ENST00000443206 IFIT1P09914 478 aaKnown RBP16.35■□□□□ 0.21
TOM1-208ENST00000443206 FKBP1AP62942 108 aaKnown RBP16.35■□□□□ 0.21
TOM1-208ENST00000443206 ANGEL2Q5VTE6 544 aaKnown RBP16.35■□□□□ 0.21
TOM1-208ENST00000443206 FTSJ3Q8IY81 847 aaKnown RBP16.35■□□□□ 0.21
TOM1-208ENST00000443206 VGLL2Q8N8G2 317 aa16.35■□□□□ 0.21
TOM1-208ENST00000443206 TDRD7Q8NHU6 1098 aaKnown RBP16.35■□□□□ 0.21
TOM1-208ENST00000443206 SIL1Q9H173 461 aa16.35■□□□□ 0.21
TOM1-208ENST00000443206 FRAT2O75474 233 aaPredicted RBP16.34■□□□□ 0.21
TOM1-208ENST00000443206 CIAO1O76071 339 aa16.34■□□□□ 0.21
TOM1-208ENST00000443206 GNAI2P04899 355 aa16.34■□□□□ 0.21
TOM1-208ENST00000443206 PUM3Q15397 648 aaKnown RBP16.34■□□□□ 0.21
TOM1-208ENST00000443206 TMEM57Q8N5G2 664 aa16.34■□□□□ 0.21
TOM1-208ENST00000443206 CEP126Q9P2H0 1117 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms