RNA–Protein interactions for RNA: ENST00000442234.5

LIG4-203, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 3,982 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-203ENST00000442234 ASAP1Q9ULH1 1129 aa3.23□□□□□ -1.89
LIG4-203ENST00000442234 LHX6Q9UPM6 363 aa3.23□□□□□ -1.89
LIG4-203ENST00000442234 NPATQ14207 1427 aa3.23□□□□□ -1.89
LIG4-203ENST00000442234 POTEB3A0JP26 581 aa3.23□□□□□ -1.89
LIG4-203ENST00000442234 EIF3CLB5ME19 914 aaKnown RBP3.23□□□□□ -1.89
LIG4-203ENST00000442234 ANKRD65E5RJM6 399 aa3.23□□□□□ -1.89
LIG4-203ENST00000442234 NEFHP12036 1026 aa3.23□□□□□ -1.89
LIG4-203ENST00000442234 MYL6BP14649 208 aa3.23□□□□□ -1.89
LIG4-203ENST00000442234 RWDD2BP57060 319 aa3.23□□□□□ -1.89
LIG4-203ENST00000442234 MTA1Q13330 715 aa3.23□□□□□ -1.89
LIG4-203ENST00000442234 NEDD9Q14511 834 aa3.23□□□□□ -1.89
LIG4-203ENST00000442234 NAA25Q14CX7 972 aa3.23□□□□□ -1.89
LIG4-203ENST00000442234 MAP9Q49MG5 647 aa3.23□□□□□ -1.89
LIG4-203ENST00000442234 HSP90B2PQ58FF3 399 aa3.23□□□□□ -1.89
LIG4-203ENST00000442234 DALRD3Q5D0E6 543 aaKnown RBP3.23□□□□□ -1.89
LIG4-203ENST00000442234 GORABQ5T7V8 394 aa3.23□□□□□ -1.89
LIG4-203ENST00000442234 POTEBQ6S5H4 581 aa3.23□□□□□ -1.89
LIG4-203ENST00000442234 TBC1D22AQ8WUA7 517 aa3.23□□□□□ -1.89
LIG4-203ENST00000442234 EIF3CQ99613 913 aaKnown RBP3.23□□□□□ -1.89
LIG4-203ENST00000442234 CRACR2AQ9BSW2 395 aa3.23□□□□□ -1.89
LIG4-203ENST00000442234 STK31Q9BXU1 1019 aa3.23□□□□□ -1.89
LIG4-203ENST00000442234 CENPHQ9H3R5 247 aa3.23□□□□□ -1.89
LIG4-203ENST00000442234 ZNF277Q9NRM2 450 aaPredicted RBP3.23□□□□□ -1.89
LIG4-203ENST00000442234 MIS18AQ9NYP9 233 aa3.23□□□□□ -1.89
LIG4-203ENST00000442234 MRFAP1Q9Y605 127 aa3.23□□□□□ -1.89
LIG4-203ENST00000442234 CROCC2H7BZ55 1655 aa3.23□□□□□ -1.89
LIG4-203ENST00000442234 TCOF1Q13428 1488 aaKnown RBP3.22□□□□□ -1.89
LIG4-203ENST00000442234 CCDC141Q6ZP82 1450 aa3.22□□□□□ -1.89
LIG4-203ENST00000442234 MARF1Q9Y4F3 1742 aaKnown RBP3.22□□□□□ -1.89
LIG4-203ENST00000442234 ROCK2O75116 1388 aaKnown RBP3.22□□□□□ -1.89
LIG4-203ENST00000442234 CCDC189A1A4V9 331 aa3.22□□□□□ -1.89
LIG4-203ENST00000442234 F8W031 263 aaPredicted RBP3.22□□□□□ -1.89
LIG4-203ENST00000442234 K7ELQ4 463 aaPredicted RBP3.22□□□□□ -1.89
LIG4-203ENST00000442234 CTIFO43310 598 aaKnown RBP3.22□□□□□ -1.89
LIG4-203ENST00000442234 ERLIN2O94905 339 aa3.22□□□□□ -1.89
LIG4-203ENST00000442234 TRAF1Q13077 416 aa3.22□□□□□ -1.89
LIG4-203ENST00000442234 DHX8Q14562 1220 aaKnown RBP3.22□□□□□ -1.89
LIG4-203ENST00000442234 KMT5BQ4FZB7 885 aa3.22□□□□□ -1.89
LIG4-203ENST00000442234 HSP90AB2PQ58FF8 381 aa3.22□□□□□ -1.89
LIG4-203ENST00000442234 CEP135Q66GS9 1140 aa3.22□□□□□ -1.89
LIG4-203ENST00000442234 FBXO38Q6PIJ6 1188 aa3.22□□□□□ -1.89
LIG4-203ENST00000442234 KIAA1328Q86T90 577 aa3.22□□□□□ -1.89
LIG4-203ENST00000442234 PROCA1Q8NCQ7 364 aaPredicted RBP3.22□□□□□ -1.89
LIG4-203ENST00000442234 JDP2Q8WYK2 163 aa3.22□□□□□ -1.89
LIG4-203ENST00000442234 UBXN4Q92575 508 aa3.22□□□□□ -1.89
LIG4-203ENST00000442234 ZDHHC16Q969W1 377 aa3.22□□□□□ -1.89
LIG4-203ENST00000442234 HS3ST6Q96QI5 342 aa3.22□□□□□ -1.89
LIG4-203ENST00000442234 JPH2Q9BR39 696 aaPredicted RBP3.22□□□□□ -1.89
LIG4-203ENST00000442234 G3BP2Q9UN86 482 aaKnown RBP3.22□□□□□ -1.89
LIG4-203ENST00000442234 UGGT2Q9NYU1 1516 aa3.22□□□□□ -1.89
LIG4-203ENST00000442234 LRP5O75197 1615 aa3.22□□□□□ -1.89
LIG4-203ENST00000442234 ARHGEF40Q8TER5 1519 aa3.22□□□□□ -1.89
LIG4-203ENST00000442234 FRMD3A2A2Y4 597 aa3.22□□□□□ -1.89
LIG4-203ENST00000442234 POTEMA6NI47 508 aa3.22□□□□□ -1.89
LIG4-203ENST00000442234 C6orf229H3BNL8 230 aa3.22□□□□□ -1.89
LIG4-203ENST00000442234 RAD21O60216 631 aa3.22□□□□□ -1.89
LIG4-203ENST00000442234 KINO60870 393 aaKnown RBP3.22□□□□□ -1.89
LIG4-203ENST00000442234 EIF3JO75822 258 aaKnown RBP3.22□□□□□ -1.89
LIG4-203ENST00000442234 RLBP1P12271 317 aa3.22□□□□□ -1.89
LIG4-203ENST00000442234 OSBPP22059 807 aa3.22□□□□□ -1.89
LIG4-203ENST00000442234 LMOD1P29536 600 aaPredicted RBP3.22□□□□□ -1.89
LIG4-203ENST00000442234 OAS2P29728 719 aaKnown RBP3.22□□□□□ -1.89
LIG4-203ENST00000442234 CHMP4BP1P59074 171 aa3.22□□□□□ -1.89
LIG4-203ENST00000442234 TMF1P82094 1093 aa3.22□□□□□ -1.89
LIG4-203ENST00000442234 PTPN14Q15678 1187 aa3.22□□□□□ -1.89
LIG4-203ENST00000442234 DBN1Q16643 649 aa3.22□□□□□ -1.89
LIG4-203ENST00000442234 CCDC96Q2M329 555 aa3.22□□□□□ -1.89
LIG4-203ENST00000442234 POTEGQ6S5H5 508 aa3.22□□□□□ -1.89
LIG4-203ENST00000442234 FILIP1Q7Z7B0 1213 aa3.22□□□□□ -1.89
LIG4-203ENST00000442234 C2CD5Q86YS7 1000 aa3.22□□□□□ -1.89
LIG4-203ENST00000442234 ERC1Q8IUD2 1116 aa3.22□□□□□ -1.89
LIG4-203ENST00000442234 SMC5Q8IY18 1101 aa3.22□□□□□ -1.89
LIG4-203ENST00000442234 KLHL23Q8NBE8 558 aa3.22□□□□□ -1.89
LIG4-203ENST00000442234 ARMC2Q8NEN0 867 aa3.22□□□□□ -1.89
LIG4-203ENST00000442234 KCNV2Q8TDN2 545 aa3.22□□□□□ -1.89
LIG4-203ENST00000442234 NUP133Q8WUM0 1156 aa3.22□□□□□ -1.89
LIG4-203ENST00000442234 THOC1Q96FV9 657 aaKnown RBP3.22□□□□□ -1.89
LIG4-203ENST00000442234 FAM163AQ96GL9 167 aaPredicted RBP3.22□□□□□ -1.89
LIG4-203ENST00000442234 MYO6Q9UM54 1294 aa3.22□□□□□ -1.89
LIG4-203ENST00000442234 CCDC144AA2RUR9 1427 aa3.22□□□□□ -1.89
LIG4-203ENST00000442234 CGNL1Q0VF96 1302 aa3.22□□□□□ -1.89
LIG4-203ENST00000442234 RALGAPBQ86X10 1494 aa3.22□□□□□ -1.89
LIG4-203ENST00000442234 EHBP1L1Q8N3D4 1523 aa3.22□□□□□ -1.89
LIG4-203ENST00000442234 ATP10DQ9P241 1426 aa3.22□□□□□ -1.89
LIG4-203ENST00000442234 ST20-MTHFSA0A0A6YYL1 179 aa3.22□□□□□ -1.89
LIG4-203ENST00000442234 PLXNC1O60486 1568 aa3.22□□□□□ -1.89
LIG4-203ENST00000442234 SLU7O95391 586 aaKnown RBP3.22□□□□□ -1.89
LIG4-203ENST00000442234 ECEL1O95672 775 aa3.22□□□□□ -1.89
LIG4-203ENST00000442234 ELF1P32519 619 aa3.22□□□□□ -1.89
LIG4-203ENST00000442234 ACTN2P35609 894 aa3.22□□□□□ -1.89
LIG4-203ENST00000442234 PDE6BP35913 854 aa3.22□□□□□ -1.89
LIG4-203ENST00000442234 MTHFSP49914 203 aa3.22□□□□□ -1.89
LIG4-203ENST00000442234 EMP3P54852 163 aa3.22□□□□□ -1.89
LIG4-203ENST00000442234 MLLT1Q03111 559 aaPredicted RBP3.22□□□□□ -1.89
LIG4-203ENST00000442234 INF2Q27J81 1249 aa3.22□□□□□ -1.89
LIG4-203ENST00000442234 ZC3H12AQ5D1E8 599 aaKnown RBP3.22□□□□□ -1.89
LIG4-203ENST00000442234 SWT1Q5T5J6 900 aaKnown RBP3.22□□□□□ -1.89
LIG4-203ENST00000442234 TSHZ1Q6ZSZ6 1077 aa3.22□□□□□ -1.89
LIG4-203ENST00000442234 TRIM74Q86UV6 250 aa3.22□□□□□ -1.89
LIG4-203ENST00000442234 TRIM73Q86UV7 250 aa3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms