RNA–Protein interactions for RNA: ENST00000442029.5

PTPRN-206, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

TSL 4

Gene PTPRN, Length 541 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-206ENST00000442029 MAP2K1Q02750 393 aaPredicted RBP18.29■□□□□ 0.52
PTPRN-206ENST00000442029 TAF7LQ5H9L4 462 aa18.29■□□□□ 0.52
PTPRN-206ENST00000442029 CYP4F22Q6NT55 531 aa18.29■□□□□ 0.52
PTPRN-206ENST00000442029 TNS4Q8IZW8 715 aa18.29■□□□□ 0.52
PTPRN-206ENST00000442029 COA1Q9GZY4 146 aa18.29■□□□□ 0.52
PTPRN-206ENST00000442029 FOXN1O15353 648 aa18.28■□□□□ 0.52
PTPRN-206ENST00000442029 EGFRP00533 1210 aa18.28■□□□□ 0.52
PTPRN-206ENST00000442029 USP17L8P0C7I0 530 aa18.28■□□□□ 0.52
PTPRN-206ENST00000442029 FOXO4P98177 505 aa18.28■□□□□ 0.52
PTPRN-206ENST00000442029 CHRNDQ07001 517 aa18.28■□□□□ 0.52
PTPRN-206ENST00000442029 CCDC57Q2TAC2 916 aa18.28■□□□□ 0.52
PTPRN-206ENST00000442029 WTIPA6NIX2 430 aaPredicted RBP18.27■□□□□ 0.52
PTPRN-206ENST00000442029 CTCFP49711 727 aaPredicted RBP18.27■□□□□ 0.52
PTPRN-206ENST00000442029 LMBR1LQ6UX01 489 aa18.27■□□□□ 0.52
PTPRN-206ENST00000442029 SAPCD2Q86UD0 394 aa18.27■□□□□ 0.52
PTPRN-206ENST00000442029 SULF1Q8IWU6 871 aa18.27■□□□□ 0.52
PTPRN-206ENST00000442029 BEGAINQ9BUH8 593 aa18.27■□□□□ 0.52
PTPRN-206ENST00000442029 GGA3Q9NZ52 723 aa18.27■□□□□ 0.52
PTPRN-206ENST00000442029 MYO3BQ8WXR4 1341 aa18.26■□□□□ 0.51
PTPRN-206ENST00000442029 ZNF280AP59817 542 aaPredicted RBP18.26■□□□□ 0.51
PTPRN-206ENST00000442029 MRPL50Q8N5N7 158 aaKnown RBP18.26■□□□□ 0.51
PTPRN-206ENST00000442029 WBP1LQ9NX94 342 aa18.26■□□□□ 0.51
PTPRN-206ENST00000442029 PTPRCP08575 1304 aa18.25■□□□□ 0.51
PTPRN-206ENST00000442029 ADM5C9JUS6 153 aa18.25■□□□□ 0.51
PTPRN-206ENST00000442029 SLFN5Q08AF3 891 aa18.25■□□□□ 0.51
PTPRN-206ENST00000442029 STRIP1Q5VSL9 837 aa18.25■□□□□ 0.51
PTPRN-206ENST00000442029 TXNRD3Q86VQ6 643 aa18.25■□□□□ 0.51
PTPRN-206ENST00000442029 OGFOD1Q8N543 542 aa18.25■□□□□ 0.51
PTPRN-206ENST00000442029 MYOZ2Q9NPC6 264 aa18.25■□□□□ 0.51
PTPRN-206ENST00000442029 CNNM1Q9NRU3 951 aa18.25■□□□□ 0.51
PTPRN-206ENST00000442029 ECM29Q5VYK3 1845 aa18.25■□□□□ 0.51
PTPRN-206ENST00000442029 AKAP11Q9UKA4 1901 aa18.24■□□□□ 0.51
PTPRN-206ENST00000442029 CCER2I3L3R5 266 aa18.24■□□□□ 0.51
PTPRN-206ENST00000442029 TAF5LO75529 589 aa18.24■□□□□ 0.51
PTPRN-206ENST00000442029 SCARF1Q14162 830 aa18.24■□□□□ 0.51
PTPRN-206ENST00000442029 EPHA10Q5JZY3 1008 aa18.24■□□□□ 0.51
PTPRN-206ENST00000442029 LDHAL6AQ6ZMR3 332 aa18.24■□□□□ 0.51
PTPRN-206ENST00000442029 C2orf69Q8N8R5 385 aa18.24■□□□□ 0.51
PTPRN-206ENST00000442029 HHIPL1Q96JK4 782 aa18.24■□□□□ 0.51
PTPRN-206ENST00000442029 GMLQ99445 158 aa18.24■□□□□ 0.51
PTPRN-206ENST00000442029 KLRK1P26718 216 aa18.23■□□□□ 0.51
PTPRN-206ENST00000442029 HUNKP57058 714 aa18.23■□□□□ 0.51
PTPRN-206ENST00000442029 DACT2Q5SW24 774 aa18.23■□□□□ 0.51
PTPRN-206ENST00000442029 ANGEL2Q5VTE6 544 aaKnown RBP18.23■□□□□ 0.51
PTPRN-206ENST00000442029 TTLL5Q6EMB2 1281 aa18.23■□□□□ 0.51
PTPRN-206ENST00000442029 HELBQ8NG08 1087 aaPredicted RBP18.23■□□□□ 0.51
PTPRN-206ENST00000442029 ZNF594Q96JF6 807 aaPredicted RBP18.23■□□□□ 0.51
PTPRN-206ENST00000442029 GBA2Q9HCG7 927 aaPredicted RBP18.23■□□□□ 0.51
PTPRN-206ENST00000442029 PLIN1O60240 522 aa18.22■□□□□ 0.51
PTPRN-206ENST00000442029 MAP2K2P36507 400 aa18.22■□□□□ 0.51
PTPRN-206ENST00000442029 DLK2Q6UY11 383 aa18.22■□□□□ 0.51
PTPRN-206ENST00000442029 SSH1Q8WYL5 1049 aa18.22■□□□□ 0.51
PTPRN-206ENST00000442029 MXD3Q9BW11 206 aa18.22■□□□□ 0.51
PTPRN-206ENST00000442029 PRDM10Q9NQV6 1147 aa18.22■□□□□ 0.51
PTPRN-206ENST00000442029 HDAC9Q9UKV0 1011 aa18.22■□□□□ 0.51
PTPRN-206ENST00000442029 ASTN2O75129 1339 aaPredicted RBP18.22■□□□□ 0.51
PTPRN-206ENST00000442029 AOC2O75106 756 aa18.21■□□□□ 0.51
PTPRN-206ENST00000442029 GTF2IP78347 998 aa18.21■□□□□ 0.51
PTPRN-206ENST00000442029 ALDH1L2Q3SY69 923 aa18.21■□□□□ 0.51
PTPRN-206ENST00000442029 ZNF804AQ7Z570 1209 aa18.21■□□□□ 0.51
PTPRN-206ENST00000442029 SUCLG2Q96I99 432 aa18.21■□□□□ 0.51
PTPRN-206ENST00000442029 CD209Q9NNX6 404 aa18.21■□□□□ 0.51
PTPRN-206ENST00000442029 SMC4Q9NTJ3 1288 aa18.21■□□□□ 0.51
PTPRN-206ENST00000442029 NBPF7P0C2Y1 421 aaPredicted RBP18.2■□□□□ 0.5
PTPRN-206ENST00000442029 MMP14P50281 582 aa18.2■□□□□ 0.5
PTPRN-206ENST00000442029 LBX1P52954 281 aa18.2■□□□□ 0.5
PTPRN-206ENST00000442029 CDCA5Q96FF9 252 aa18.2■□□□□ 0.5
PTPRN-206ENST00000442029 CDCA7LQ96GN5 454 aa18.2■□□□□ 0.5
PTPRN-206ENST00000442029 PITPNM2Q9BZ72 1349 aa18.2■□□□□ 0.5
PTPRN-206ENST00000442029 MYH13Q9UKX3 1938 aa18.19■□□□□ 0.5
PTPRN-206ENST00000442029 SNAP23O00161 211 aa18.19■□□□□ 0.5
PTPRN-206ENST00000442029 KIAA0825Q8IV33 1275 aa18.19■□□□□ 0.5
PTPRN-206ENST00000442029 PAPPA2Q9BXP8 1791 aa18.19■□□□□ 0.5
PTPRN-206ENST00000442029 UTYO14607 1347 aa18.19■□□□□ 0.5
PTPRN-206ENST00000442029 CAPN15O75808 1086 aa18.18■□□□□ 0.5
PTPRN-206ENST00000442029 HSPA8P11142 646 aaKnown RBP18.18■□□□□ 0.5
PTPRN-206ENST00000442029 NOGQ13253 232 aa18.18■□□□□ 0.5
PTPRN-206ENST00000442029 RGMBQ6NW40 437 aa18.18■□□□□ 0.5
PTPRN-206ENST00000442029 C15orf52Q6ZUT6 534 aaKnown RBP18.18■□□□□ 0.5
PTPRN-206ENST00000442029 CASP8AP2Q9UKL3 1982 aa18.18■□□□□ 0.5
PTPRN-206ENST00000442029 ARAP2Q8WZ64 1704 aa18.18■□□□□ 0.5
PTPRN-206ENST00000442029 CT47B1P0C2W7 299 aaPredicted RBP18.17■□□□□ 0.5
PTPRN-206ENST00000442029 NBPF9Q3BBW0 867 aa18.17■□□□□ 0.5
PTPRN-206ENST00000442029 BICC1Q9H694 974 aaKnown RBP18.17■□□□□ 0.5
PTPRN-206ENST00000442029 WNT10BO00744 389 aa18.16■□□□□ 0.5
PTPRN-206ENST00000442029 SASH1O94885 1247 aa18.16■□□□□ 0.5
PTPRN-206ENST00000442029 ZNF157P51786 506 aaPredicted RBP18.16■□□□□ 0.5
PTPRN-206ENST00000442029 BRPF1P55201 1214 aaPredicted RBP18.16■□□□□ 0.5
PTPRN-206ENST00000442029 CCDC102AQ96A19 550 aa18.16■□□□□ 0.5
PTPRN-206ENST00000442029 KAZALD1Q96I82 304 aa18.16■□□□□ 0.5
PTPRN-206ENST00000442029 MROH5Q6ZUA9 1318 aa18.16■□□□□ 0.5
PTPRN-206ENST00000442029 CA12O43570 354 aa18.15■□□□□ 0.5
PTPRN-206ENST00000442029 IL1R1P14778 569 aa18.15■□□□□ 0.5
PTPRN-206ENST00000442029 UBE4AQ14139 1066 aa18.15■□□□□ 0.5
PTPRN-206ENST00000442029 SCAF8Q9UPN6 1271 aaKnown RBP18.15■□□□□ 0.5
PTPRN-206ENST00000442029 IRS2Q9Y4H2 1338 aa18.15■□□□□ 0.5
PTPRN-206ENST00000442029 NF2P35240 595 aa18.14■□□□□ 0.49
PTPRN-206ENST00000442029 FKBP1BP68106 108 aa18.14■□□□□ 0.49
PTPRN-206ENST00000442029 TTLL12Q14166 644 aaPredicted RBP18.14■□□□□ 0.49
PTPRN-206ENST00000442029 RABL6Q3YEC7 729 aaPredicted RBP18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms