RNA–Protein interactions for RNA: ENST00000442010.2

HMGB3P22-201, Transcript of high mobility group box 3 pseudogene 22, humanhuman

TSL 2 BASIC

Gene HMGB3P22, Length 597 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P22-201ENST00000442010 VEGFBP49765 207 aa23.91■■□□□ 1.42
HMGB3P22-201ENST00000442010 ZNF280AP59817 542 aaPredicted RBP23.91■■□□□ 1.42
HMGB3P22-201ENST00000442010 CCDC57Q2TAC2 916 aa23.9■■□□□ 1.42
HMGB3P22-201ENST00000442010 RABL6Q3YEC7 729 aaPredicted RBP23.9■■□□□ 1.42
HMGB3P22-201ENST00000442010 CDC37L1Q7L3B6 337 aa23.9■■□□□ 1.42
HMGB3P22-201ENST00000442010 MIER1Q8N108 512 aa23.9■■□□□ 1.42
HMGB3P22-201ENST00000442010 SNAP23O00161 211 aa23.89■■□□□ 1.41
HMGB3P22-201ENST00000442010 TAF5LO75529 589 aa23.89■■□□□ 1.41
HMGB3P22-201ENST00000442010 BRPF1P55201 1214 aaPredicted RBP23.89■■□□□ 1.41
HMGB3P22-201ENST00000442010 DEFB115Q30KQ5 88 aa23.89■■□□□ 1.41
HMGB3P22-201ENST00000442010 DACT2Q5SW24 774 aa23.89■■□□□ 1.41
HMGB3P22-201ENST00000442010 DIEXFQ68CQ4 756 aaKnown RBP23.89■■□□□ 1.41
HMGB3P22-201ENST00000442010 C15orf52Q6ZUT6 534 aaKnown RBP23.89■■□□□ 1.41
HMGB3P22-201ENST00000442010 SMC4Q9NTJ3 1288 aa23.89■■□□□ 1.41
HMGB3P22-201ENST00000442010 HSPA1AP0DMV8 641 aaKnown RBP23.88■■□□□ 1.41
HMGB3P22-201ENST00000442010 HSPA1BP0DMV9 641 aaKnown RBP23.88■■□□□ 1.41
HMGB3P22-201ENST00000442010 KIF4BQ2VIQ3 1234 aa23.88■■□□□ 1.41
HMGB3P22-201ENST00000442010 RBM26Q5T8P6 1007 aaKnown RBP23.88■■□□□ 1.41
HMGB3P22-201ENST00000442010 HELBQ8NG08 1087 aaPredicted RBP23.88■■□□□ 1.41
HMGB3P22-201ENST00000442010 USP44Q9H0E7 712 aa23.88■■□□□ 1.41
HMGB3P22-201ENST00000442010 ABT1Q9ULW3 272 aaKnown RBP23.88■■□□□ 1.41
HMGB3P22-201ENST00000442010 THSD7BQ9C0I4 1608 aa23.88■■□□□ 1.41
HMGB3P22-201ENST00000442010 STRIP1Q5VSL9 837 aa23.87■■□□□ 1.41
HMGB3P22-201ENST00000442010 LDHAL6AQ6ZMR3 332 aa23.87■■□□□ 1.41
HMGB3P22-201ENST00000442010 ANKRD44Q8N8A2 993 aa23.87■■□□□ 1.41
HMGB3P22-201ENST00000442010 BICC1Q9H694 974 aaKnown RBP23.87■■□□□ 1.41
HMGB3P22-201ENST00000442010 TLL2Q9Y6L7 1015 aa23.87■■□□□ 1.41
HMGB3P22-201ENST00000442010 CELF2O95319 508 aaKnown RBP23.86■■□□□ 1.41
HMGB3P22-201ENST00000442010 USP17L8P0C7I0 530 aa23.86■■□□□ 1.41
HMGB3P22-201ENST00000442010 USP48Q86UV5 1035 aa23.86■■□□□ 1.41
HMGB3P22-201ENST00000442010 MXD3Q9BW11 206 aa23.86■■□□□ 1.41
HMGB3P22-201ENST00000442010 ASTN2O75129 1339 aaPredicted RBP23.85■■□□□ 1.41
HMGB3P22-201ENST00000442010 KCNJ4P48050 445 aa23.85■■□□□ 1.41
HMGB3P22-201ENST00000442010 DLK2Q6UY11 383 aa23.85■■□□□ 1.41
HMGB3P22-201ENST00000442010 CD209Q9NNX6 404 aa23.85■■□□□ 1.41
HMGB3P22-201ENST00000442010 TAF7LQ5H9L4 462 aa23.84■■□□□ 1.41
HMGB3P22-201ENST00000442010 PUS3Q9BZE2 481 aaKnown RBP23.84■■□□□ 1.41
HMGB3P22-201ENST00000442010 MYOZ2Q9NPC6 264 aa23.84■■□□□ 1.41
HMGB3P22-201ENST00000442010 CNNM1Q9NRU3 951 aa23.84■■□□□ 1.41
HMGB3P22-201ENST00000442010 NOB1Q9ULX3 412 aaKnown RBP23.84■■□□□ 1.41
HMGB3P22-201ENST00000442010 MYO3BQ8WXR4 1341 aa23.84■■□□□ 1.41
HMGB3P22-201ENST00000442010 WDR33Q9C0J8 1336 aaKnown RBP23.84■■□□□ 1.41
HMGB3P22-201ENST00000442010 RARSP54136 660 aaKnown RBP23.83■■□□□ 1.41
HMGB3P22-201ENST00000442010 TTLL5Q6EMB2 1281 aa23.83■■□□□ 1.41
HMGB3P22-201ENST00000442010 KRT26Q7Z3Y9 468 aa23.83■■□□□ 1.41
HMGB3P22-201ENST00000442010 SAPCD2Q86UD0 394 aa23.83■■□□□ 1.41
HMGB3P22-201ENST00000442010 RIPOR2Q9Y4F9 1068 aa23.83■■□□□ 1.41
HMGB3P22-201ENST00000442010 SCARF1Q14162 830 aa23.82■■□□□ 1.4
HMGB3P22-201ENST00000442010 DCPSQ96C86 337 aaKnown RBP23.82■■□□□ 1.4
HMGB3P22-201ENST00000442010 GGA3Q9NZ52 723 aa23.82■■□□□ 1.4
HMGB3P22-201ENST00000442010 ADM5C9JUS6 153 aa23.81■■□□□ 1.4
HMGB3P22-201ENST00000442010 IL1R1P14778 569 aa23.81■■□□□ 1.4
HMGB3P22-201ENST00000442010 GTF2IP78347 998 aa23.8■■□□□ 1.4
HMGB3P22-201ENST00000442010 HHIPL1Q96JK4 782 aa23.8■■□□□ 1.4
HMGB3P22-201ENST00000442010 PLIN1O60240 522 aa23.79■■□□□ 1.4
HMGB3P22-201ENST00000442010 UBE4AQ14139 1066 aa23.79■■□□□ 1.4
HMGB3P22-201ENST00000442010 CYP4F22Q6NT55 531 aa23.79■■□□□ 1.4
HMGB3P22-201ENST00000442010 FBXW7Q969H0 707 aa23.79■■□□□ 1.4
HMGB3P22-201ENST00000442010 CAPNS2Q96L46 248 aa23.79■■□□□ 1.4
HMGB3P22-201ENST00000442010 ZNF408Q9H9D4 720 aa23.79■■□□□ 1.4
HMGB3P22-201ENST00000442010 ECM29Q5VYK3 1845 aa23.79■■□□□ 1.4
HMGB3P22-201ENST00000442010 MMP14P50281 582 aa23.78■■□□□ 1.4
HMGB3P22-201ENST00000442010 LRRC24Q50LG9 513 aa23.78■■□□□ 1.4
HMGB3P22-201ENST00000442010 COL13A1Q5TAT6 717 aaPredicted RBP23.78■■□□□ 1.4
HMGB3P22-201ENST00000442010 ANGEL2Q5VTE6 544 aaKnown RBP23.78■■□□□ 1.4
HMGB3P22-201ENST00000442010 API5Q9BZZ5 524 aaKnown RBP23.78■■□□□ 1.4
HMGB3P22-201ENST00000442010 WBP1LQ9NX94 342 aa23.78■■□□□ 1.4
HMGB3P22-201ENST00000442010 MROH5Q6ZUA9 1318 aa23.78■■□□□ 1.4
HMGB3P22-201ENST00000442010 PITPNM2Q9BZ72 1349 aa23.78■■□□□ 1.4
HMGB3P22-201ENST00000442010 ECE1P42892 770 aa23.77■■□□□ 1.4
HMGB3P22-201ENST00000442010 NBPF9Q3BBW0 867 aa23.77■■□□□ 1.4
HMGB3P22-201ENST00000442010 ZNF804AQ7Z570 1209 aa23.77■■□□□ 1.4
HMGB3P22-201ENST00000442010 SULF1Q8IWU6 871 aa23.77■■□□□ 1.4
HMGB3P22-201ENST00000442010 CERS5Q8N5B7 392 aa23.77■■□□□ 1.4
HMGB3P22-201ENST00000442010 ARHGAP45Q92619 1136 aa23.77■■□□□ 1.4
HMGB3P22-201ENST00000442010 RFX5P48382 616 aaPredicted RBP23.76■■□□□ 1.39
HMGB3P22-201ENST00000442010 OGFOD1Q8N543 542 aa23.76■■□□□ 1.39
HMGB3P22-201ENST00000442010 VGLL2Q8N8G2 317 aa23.76■■□□□ 1.39
HMGB3P22-201ENST00000442010 KLHDC4Q8TBB5 520 aa23.76■■□□□ 1.39
HMGB3P22-201ENST00000442010 ARAP2Q8WZ64 1704 aa23.76■■□□□ 1.39
HMGB3P22-201ENST00000442010 WNT10BO00744 389 aa23.75■■□□□ 1.39
HMGB3P22-201ENST00000442010 FOXN1O15353 648 aa23.75■■□□□ 1.39
HMGB3P22-201ENST00000442010 IFFO2Q5TF58 517 aa23.75■■□□□ 1.39
HMGB3P22-201ENST00000442010 KIAA0825Q8IV33 1275 aa23.75■■□□□ 1.39
HMGB3P22-201ENST00000442010 ZBED3Q96IU2 234 aaPredicted RBP23.75■■□□□ 1.39
HMGB3P22-201ENST00000442010 FKBP1AP62942 108 aaKnown RBP23.74■■□□□ 1.39
HMGB3P22-201ENST00000442010 TDRD7Q8NHU6 1098 aaKnown RBP23.74■■□□□ 1.39
HMGB3P22-201ENST00000442010 CDCA5Q96FF9 252 aa23.74■■□□□ 1.39
HMGB3P22-201ENST00000442010 FAM84BQ96KN1 310 aaPredicted RBP23.74■■□□□ 1.39
HMGB3P22-201ENST00000442010 KIF16BQ96L93 1317 aa23.74■■□□□ 1.39
HMGB3P22-201ENST00000442010 SASH1O94885 1247 aa23.73■■□□□ 1.39
HMGB3P22-201ENST00000442010 PAXIP1Q6ZW49 1069 aaPredicted RBP23.73■■□□□ 1.39
HMGB3P22-201ENST00000442010 GBA2Q9HCG7 927 aaPredicted RBP23.73■■□□□ 1.39
HMGB3P22-201ENST00000442010 UBTFL1P0CB47 393 aaPredicted RBP23.72■■□□□ 1.39
HMGB3P22-201ENST00000442010 GYG1P46976 350 aa23.72■■□□□ 1.39
HMGB3P22-201ENST00000442010 HNRNPUQ00839 825 aaKnown RBP eCLIP23.72■■□□□ 1.39
HMGB3P22-201ENST00000442010 MAP2K1Q02750 393 aaPredicted RBP23.72■■□□□ 1.39
HMGB3P22-201ENST00000442010 PTPN12Q05209 780 aaKnown RBP23.72■■□□□ 1.39
HMGB3P22-201ENST00000442010 INTS3Q68E01 1043 aaKnown RBP23.72■■□□□ 1.39
HMGB3P22-201ENST00000442010 HDAC9Q9UKV0 1011 aa23.72■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms