RNA–Protein interactions for RNA: ENST00000441867.5

ABCF1-203, Transcript of ATP binding cassette subfamily F member 1, humanhuman

TSL 5

Gene ABCF1, Length 1,074 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-203ENST00000441867 PRAMEF18Q5VWM3 479 aa12□□□□□ -0.49
ABCF1-203ENST00000441867 ANKRD13DQ6ZTN6 518 aa12□□□□□ -0.49
ABCF1-203ENST00000441867 ARMC5Q96C12 935 aa12□□□□□ -0.49
ABCF1-203ENST00000441867 TMEM106CQ9BVX2 250 aa12□□□□□ -0.49
ABCF1-203ENST00000441867 R3HDMLQ9H3Y0 253 aa12□□□□□ -0.49
ABCF1-203ENST00000441867 PTPN22Q9Y2R2 807 aa12□□□□□ -0.49
ABCF1-203ENST00000441867 POLR2AP24928 1970 aaKnown RBP11.99□□□□□ -0.49
ABCF1-203ENST00000441867 UNCXA6NJT0 531 aa11.99□□□□□ -0.49
ABCF1-203ENST00000441867 ZBTB48P10074 688 aaPredicted RBP11.99□□□□□ -0.49
ABCF1-203ENST00000441867 NBPF9Q3BBW0 867 aa11.99□□□□□ -0.49
ABCF1-203ENST00000441867 OTUD7BQ6GQQ9 843 aa11.99□□□□□ -0.49
ABCF1-203ENST00000441867 IFNL1Q8IU54 200 aa11.99□□□□□ -0.49
ABCF1-203ENST00000441867 SLC10A4Q96EP9 437 aa11.99□□□□□ -0.49
ABCF1-203ENST00000441867 XDHP47989 1333 aa11.99□□□□□ -0.49
ABCF1-203ENST00000441867 MYO3BQ8WXR4 1341 aa11.99□□□□□ -0.49
ABCF1-203ENST00000441867 CENPFP49454 3210 aa11.98□□□□□ -0.49
ABCF1-203ENST00000441867 ATP5J2-PTCD1G3V325 749 aa11.98□□□□□ -0.49
ABCF1-203ENST00000441867 WNT10BO00744 389 aa11.98□□□□□ -0.49
ABCF1-203ENST00000441867 ATP2B4P23634 1241 aa11.98□□□□□ -0.49
ABCF1-203ENST00000441867 LMOD3Q0VAK6 560 aa11.98□□□□□ -0.49
ABCF1-203ENST00000441867 ARHGEF6Q15052 776 aa11.98□□□□□ -0.49
ABCF1-203ENST00000441867 CCDC152Q4G0S7 254 aa11.98□□□□□ -0.49
ABCF1-203ENST00000441867 APOBEC3FQ8IUX4 373 aaKnown RBP11.98□□□□□ -0.49
ABCF1-203ENST00000441867 EFCC1Q9HA90 598 aa11.98□□□□□ -0.49
ABCF1-203ENST00000441867 RANBP2P49792 3224 aaKnown RBP11.97□□□□□ -0.49
ABCF1-203ENST00000441867 EN2P19622 333 aaPredicted RBP11.97□□□□□ -0.49
ABCF1-203ENST00000441867 RTL5Q5HYW3 569 aaPredicted RBP11.97□□□□□ -0.49
ABCF1-203ENST00000441867 ZBTB38Q8NAP3 1195 aaPredicted RBP11.97□□□□□ -0.49
ABCF1-203ENST00000441867 ZNF428Q96B54 188 aa11.97□□□□□ -0.49
ABCF1-203ENST00000441867 SEC31BQ9NQW1 1179 aa11.97□□□□□ -0.49
ABCF1-203ENST00000441867 CHPF2Q9P2E5 772 aa11.97□□□□□ -0.49
ABCF1-203ENST00000441867 DBF4Q9UBU7 674 aaPredicted RBP11.97□□□□□ -0.49
ABCF1-203ENST00000441867 ANGEL1Q9UNK9 670 aaKnown RBP11.97□□□□□ -0.49
ABCF1-203ENST00000441867 SCAF8Q9UPN6 1271 aaKnown RBP11.97□□□□□ -0.49
ABCF1-203ENST00000441867 DDX60Q8IY21 1712 aaKnown RBP11.97□□□□□ -0.49
ABCF1-203ENST00000441867 HOXB7P09629 217 aa11.96□□□□□ -0.49
ABCF1-203ENST00000441867 RIPK4P57078 832 aa11.96□□□□□ -0.49
ABCF1-203ENST00000441867 DACT2Q5SW24 774 aa11.96□□□□□ -0.49
ABCF1-203ENST00000441867 HDGFL1Q5TGJ6 251 aa11.96□□□□□ -0.49
ABCF1-203ENST00000441867 STRIP1Q5VSL9 837 aa11.96□□□□□ -0.49
ABCF1-203ENST00000441867 NBPF11Q86T75 865 aa11.96□□□□□ -0.49
ABCF1-203ENST00000441867 HYPKQ9NX55 129 aa11.96□□□□□ -0.49
ABCF1-203ENST00000441867 LAMB2P55268 1798 aa11.96□□□□□ -0.49
ABCF1-203ENST00000441867 PPP1R12BO60237 982 aaPredicted RBP11.95□□□□□ -0.5
ABCF1-203ENST00000441867 SP3Q02447 781 aa11.95□□□□□ -0.5
ABCF1-203ENST00000441867 PRKG1Q13976 671 aa11.95□□□□□ -0.5
ABCF1-203ENST00000441867 ANKRD18AQ8IVF6 992 aa11.95□□□□□ -0.5
ABCF1-203ENST00000441867 BRCA2P51587 3418 aa11.95□□□□□ -0.5
ABCF1-203ENST00000441867 MYBBP1AQ9BQG0 1328 aaKnown RBP11.94□□□□□ -0.5
ABCF1-203ENST00000441867 PDE8AO60658 829 aa11.94□□□□□ -0.5
ABCF1-203ENST00000441867 MAP3K11Q16584 847 aa11.94□□□□□ -0.5
ABCF1-203ENST00000441867 CD99L2Q8TCZ2 262 aa11.94□□□□□ -0.5
ABCF1-203ENST00000441867 ZNF333Q96JL9 665 aa11.94□□□□□ -0.5
ABCF1-203ENST00000441867 CDC5LQ99459 802 aaKnown RBP11.94□□□□□ -0.5
ABCF1-203ENST00000441867 COA1Q9GZY4 146 aa11.94□□□□□ -0.5
ABCF1-203ENST00000441867 PPP2R3BQ9Y5P8 575 aa11.94□□□□□ -0.5
ABCF1-203ENST00000441867 MED23Q9ULK4 1368 aa11.93□□□□□ -0.5
ABCF1-203ENST00000441867 SCN9AQ15858 1988 aa11.93□□□□□ -0.5
ABCF1-203ENST00000441867 H0YGN5 161 aa11.93□□□□□ -0.5
ABCF1-203ENST00000441867 IGF2BP3O00425 579 aaKnown RBP eCLIP11.93□□□□□ -0.5
ABCF1-203ENST00000441867 CHL1O00533 1208 aa11.93□□□□□ -0.5
ABCF1-203ENST00000441867 SASH1O94885 1247 aa11.93□□□□□ -0.5
ABCF1-203ENST00000441867 SUPT20HL1Q3ZLR7 823 aa11.93□□□□□ -0.5
ABCF1-203ENST00000441867 RIC3Q7Z5B4 369 aa11.93□□□□□ -0.5
ABCF1-203ENST00000441867 OTUD5Q96G74 571 aa11.93□□□□□ -0.5
ABCF1-203ENST00000441867 WNK4Q96J92 1243 aa11.93□□□□□ -0.5
ABCF1-203ENST00000441867 DEFB129Q9H1M3 183 aa11.93□□□□□ -0.5
ABCF1-203ENST00000441867 COL1A1P02452 1464 aaPredicted RBP11.93□□□□□ -0.5
ABCF1-203ENST00000441867 PCCAP05165 728 aaPredicted RBP11.92□□□□□ -0.5
ABCF1-203ENST00000441867 GOLGA2Q08379 1002 aa11.92□□□□□ -0.5
ABCF1-203ENST00000441867 CRHR2Q13324 411 aa11.92□□□□□ -0.5
ABCF1-203ENST00000441867 SLC4A8Q2Y0W8 1093 aa11.92□□□□□ -0.5
ABCF1-203ENST00000441867 SLC9C1Q4G0N8 1177 aa11.92□□□□□ -0.5
ABCF1-203ENST00000441867 CCDC191Q8NCU4 936 aa11.92□□□□□ -0.5
ABCF1-203ENST00000441867 FBXW7Q969H0 707 aa11.92□□□□□ -0.5
ABCF1-203ENST00000441867 COL6A3P12111 3177 aa11.91□□□□□ -0.5
ABCF1-203ENST00000441867 TAF1P21675 1872 aa11.91□□□□□ -0.5
ABCF1-203ENST00000441867 TMPOP42166 694 aaKnown RBP11.91□□□□□ -0.5
ABCF1-203ENST00000441867 ZBED3Q96IU2 234 aaPredicted RBP11.91□□□□□ -0.5
ABCF1-203ENST00000441867 MXD3Q9BW11 206 aa11.91□□□□□ -0.5
ABCF1-203ENST00000441867 BSDC1Q9NW68 430 aaPredicted RBP11.91□□□□□ -0.5
ABCF1-203ENST00000441867 LEMD3Q9Y2U8 911 aa11.91□□□□□ -0.5
ABCF1-203ENST00000441867 TESPA1A2RU30 521 aaPredicted RBP11.9□□□□□ -0.5
ABCF1-203ENST00000441867 WDHD1O75717 1129 aaPredicted RBP11.9□□□□□ -0.5
ABCF1-203ENST00000441867 IREB2P48200 963 aaKnown RBP11.9□□□□□ -0.5
ABCF1-203ENST00000441867 MNX1P50219 401 aaPredicted RBP11.9□□□□□ -0.5
ABCF1-203ENST00000441867 DLGAP5Q15398 846 aa11.9□□□□□ -0.5
ABCF1-203ENST00000441867 KRT24Q2M2I5 525 aa11.9□□□□□ -0.5
ABCF1-203ENST00000441867 CCDC184Q52MB2 194 aa11.9□□□□□ -0.5
ABCF1-203ENST00000441867 TTLL5Q6EMB2 1281 aa11.9□□□□□ -0.5
ABCF1-203ENST00000441867 CHRDL2Q6WN34 429 aa11.9□□□□□ -0.5
ABCF1-203ENST00000441867 KIAA0825Q8IV33 1275 aa11.9□□□□□ -0.5
ABCF1-203ENST00000441867 CLMNQ96JQ2 1002 aa11.9□□□□□ -0.5
ABCF1-203ENST00000441867 CWC25Q9NXE8 425 aaPredicted RBP11.9□□□□□ -0.5
ABCF1-203ENST00000441867 MINPP1Q9UNW1 487 aa11.9□□□□□ -0.5
ABCF1-203ENST00000441867 MYO1BO43795 1136 aa11.89□□□□□ -0.51
ABCF1-203ENST00000441867 CCT4P50991 539 aaKnown RBP11.89□□□□□ -0.51
ABCF1-203ENST00000441867 ANKRD13AQ8IZ07 590 aa11.89□□□□□ -0.51
ABCF1-203ENST00000441867 MTMR14Q8NCE2 650 aa11.89□□□□□ -0.51
ABCF1-203ENST00000441867 CCDC85AQ96PX6 553 aaPredicted RBP11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms