RNA–Protein interactions for RNA: ENST00000441560.6

ATL1-202, Transcript of atlastin GTPase 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene ATL1, Length 2,853 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL1-202ENST00000441560 TEX11Q8IYF3 940 aa11.32□□□□□ -0.6
ATL1-202ENST00000441560 AFAP1L1Q8TED9 768 aa11.32□□□□□ -0.6
ATL1-202ENST00000441560 CCDC12Q8WUD4 166 aaPredicted RBP11.32□□□□□ -0.6
ATL1-202ENST00000441560 ACBD3Q9H3P7 528 aa11.32□□□□□ -0.6
ATL1-202ENST00000441560 KIAA1210Q9ULL0 1709 aa11.32□□□□□ -0.6
ATL1-202ENST00000441560 ADCY9O60503 1353 aa11.32□□□□□ -0.6
ATL1-202ENST00000441560 CDC42BPBQ9Y5S2 1711 aa11.32□□□□□ -0.6
ATL1-202ENST00000441560 GNAI2P04899 355 aa11.32□□□□□ -0.6
ATL1-202ENST00000441560 RHOXF2BP0C7M4 288 aa11.32□□□□□ -0.6
ATL1-202ENST00000441560 LMOD1P29536 600 aaPredicted RBP11.32□□□□□ -0.6
ATL1-202ENST00000441560 INPP5BP32019 993 aa11.32□□□□□ -0.6
ATL1-202ENST00000441560 RDXP35241 583 aaKnown RBP11.32□□□□□ -0.6
ATL1-202ENST00000441560 CCNHP51946 323 aaPredicted RBP11.32□□□□□ -0.6
ATL1-202ENST00000441560 DPCR1Q3MIW9 517 aa11.32□□□□□ -0.6
ATL1-202ENST00000441560 RHOXF2Q9BQY4 288 aa11.32□□□□□ -0.6
ATL1-202ENST00000441560 SDF4Q9BRK5 362 aa11.32□□□□□ -0.6
ATL1-202ENST00000441560 FTOQ9C0B1 505 aaKnown RBP eCLIP11.32□□□□□ -0.6
ATL1-202ENST00000441560 ZSWIM6Q9HCJ5 1215 aa11.32□□□□□ -0.6
ATL1-202ENST00000441560 PLCH2O75038 1416 aa11.32□□□□□ -0.6
ATL1-202ENST00000441560 GPTP24298 496 aa11.31□□□□□ -0.6
ATL1-202ENST00000441560 FMNL3Q8IVF7 1028 aa11.31□□□□□ -0.6
ATL1-202ENST00000441560 RPS6KL1Q9Y6S9 549 aa11.31□□□□□ -0.6
ATL1-202ENST00000441560 ANKRD33BA6NCL7 494 aa11.31□□□□□ -0.6
ATL1-202ENST00000441560 BIN1O00499 593 aa11.31□□□□□ -0.6
ATL1-202ENST00000441560 FYB1O15117 783 aa11.31□□□□□ -0.6
ATL1-202ENST00000441560 RAB11FIP3O75154 756 aa11.31□□□□□ -0.6
ATL1-202ENST00000441560 NF2P35240 595 aa11.31□□□□□ -0.6
ATL1-202ENST00000441560 PTH1RQ03431 593 aa11.31□□□□□ -0.6
ATL1-202ENST00000441560 AP1ARQ63HQ0 302 aa11.31□□□□□ -0.6
ATL1-202ENST00000441560 CARMIL2Q6F5E8 1435 aa11.31□□□□□ -0.6
ATL1-202ENST00000441560 STAG1Q8WVM7 1258 aa11.31□□□□□ -0.6
ATL1-202ENST00000441560 TATDN2Q93075 761 aa11.31□□□□□ -0.6
ATL1-202ENST00000441560 THOC1Q96FV9 657 aaKnown RBP11.31□□□□□ -0.6
ATL1-202ENST00000441560 TRIM6Q9C030 488 aaPredicted RBP11.31□□□□□ -0.6
ATL1-202ENST00000441560 NBPF3Q9H094 633 aa11.31□□□□□ -0.6
ATL1-202ENST00000441560 CD248Q9HCU0 757 aa11.31□□□□□ -0.6
ATL1-202ENST00000441560 ETAA1Q9NY74 926 aa11.31□□□□□ -0.6
ATL1-202ENST00000441560 CFAP45Q9UL16 551 aa11.31□□□□□ -0.6
ATL1-202ENST00000441560 ATP10BO94823 1461 aa11.3□□□□□ -0.6
ATL1-202ENST00000441560 H3BQV1 296 aa11.3□□□□□ -0.6
ATL1-202ENST00000441560 GCFC2P16383 781 aaKnown RBP11.3□□□□□ -0.6
ATL1-202ENST00000441560 ERCC3P19447 782 aa11.3□□□□□ -0.6
ATL1-202ENST00000441560 ATP2B2Q01814 1243 aa11.3□□□□□ -0.6
ATL1-202ENST00000441560 IFFO2Q5TF58 517 aa11.3□□□□□ -0.6
ATL1-202ENST00000441560 PIK3R5Q8WYR1 880 aa11.3□□□□□ -0.6
ATL1-202ENST00000441560 KIFC2Q96AC6 838 aa11.3□□□□□ -0.6
ATL1-202ENST00000441560 CABS1Q96KC9 395 aa11.3□□□□□ -0.6
ATL1-202ENST00000441560 CAPN7Q9Y6W3 813 aa11.3□□□□□ -0.6
ATL1-202ENST00000441560 IPO7O95373 1038 aaKnown RBP11.3□□□□□ -0.6
ATL1-202ENST00000441560 SLC4A2P04920 1241 aa11.3□□□□□ -0.6
ATL1-202ENST00000441560 USP5P45974 858 aa11.3□□□□□ -0.6
ATL1-202ENST00000441560 COL9A3Q14050 684 aaPredicted RBP11.3□□□□□ -0.6
ATL1-202ENST00000441560 KARSQ15046 597 aaKnown RBP11.3□□□□□ -0.6
ATL1-202ENST00000441560 SRGAP1Q7Z6B7 1085 aa11.3□□□□□ -0.6
ATL1-202ENST00000441560 NUCKS1Q9H1E3 243 aaKnown RBP11.3□□□□□ -0.6
ATL1-202ENST00000441560 MCM8Q9UJA3 840 aa11.3□□□□□ -0.6
ATL1-202ENST00000441560 A0A1W2PP64 1363 aa11.3□□□□□ -0.6
ATL1-202ENST00000441560 FRMD3A2A2Y4 597 aa11.3□□□□□ -0.6
ATL1-202ENST00000441560 EME2A4GXA9 379 aaPredicted RBP11.3□□□□□ -0.6
ATL1-202ENST00000441560 LRRIQ3A6PVS8 624 aaPredicted RBP11.3□□□□□ -0.6
ATL1-202ENST00000441560 CHGAP10645 457 aaKnown RBP11.3□□□□□ -0.6
ATL1-202ENST00000441560 ATP1A3P13637 1013 aa11.3□□□□□ -0.6
ATL1-202ENST00000441560 VSNL1P62760 191 aa11.3□□□□□ -0.6
ATL1-202ENST00000441560 SMARCC1Q92922 1105 aaPredicted RBP11.3□□□□□ -0.6
ATL1-202ENST00000441560 TACO1Q9BSH4 297 aaKnown RBP11.3□□□□□ -0.6
ATL1-202ENST00000441560 IRX2Q9BZI1 471 aaPredicted RBP11.3□□□□□ -0.6
ATL1-202ENST00000441560 MAP3K4Q9Y6R4 1608 aa11.29□□□□□ -0.6
ATL1-202ENST00000441560 MYO1FO00160 1098 aa11.29□□□□□ -0.6
ATL1-202ENST00000441560 ZKSCAN1P17029 563 aaPredicted RBP11.29□□□□□ -0.6
ATL1-202ENST00000441560 FOSBP53539 338 aa11.29□□□□□ -0.6
ATL1-202ENST00000441560 FANCCQ00597 558 aa11.29□□□□□ -0.6
ATL1-202ENST00000441560 POTEDQ86YR6 584 aa11.29□□□□□ -0.6
ATL1-202ENST00000441560 FSIP1Q8NA03 581 aa11.29□□□□□ -0.6
ATL1-202ENST00000441560 CPSF2Q9P2I0 782 aaKnown RBP11.29□□□□□ -0.6
ATL1-202ENST00000441560 INO80Q9ULG1 1556 aaPredicted RBP11.29□□□□□ -0.6
ATL1-202ENST00000441560 JAK2O60674 1132 aa11.29□□□□□ -0.6
ATL1-202ENST00000441560 CUTAO60888 179 aa11.29□□□□□ -0.6
ATL1-202ENST00000441560 AP1G2O75843 785 aa11.29□□□□□ -0.6
ATL1-202ENST00000441560 FAM160A1Q05DH4 1040 aa11.29□□□□□ -0.6
ATL1-202ENST00000441560 ADCY2Q08462 1091 aa11.29□□□□□ -0.6
ATL1-202ENST00000441560 CFAP100Q494V2 611 aa11.29□□□□□ -0.6
ATL1-202ENST00000441560 ARMC3Q5W041 872 aa11.29□□□□□ -0.6
ATL1-202ENST00000441560 ZNF483Q8TF39 744 aaPredicted RBP11.29□□□□□ -0.6
ATL1-202ENST00000441560 KCNB2Q92953 911 aa11.29□□□□□ -0.6
ATL1-202ENST00000441560 BRF1Q92994 677 aa11.29□□□□□ -0.6
ATL1-202ENST00000441560 RAB21Q9UL25 225 aa11.29□□□□□ -0.6
ATL1-202ENST00000441560 TARBP1Q13395 1621 aaKnown RBP11.28□□□□□ -0.6
ATL1-202ENST00000441560 POTEB2H3BUK9 544 aa11.28□□□□□ -0.6
ATL1-202ENST00000441560 ARHGAP6O43182 974 aa11.28□□□□□ -0.6
ATL1-202ENST00000441560 ME1P48163 572 aa11.28□□□□□ -0.6
ATL1-202ENST00000441560 TOGARAM2Q6ZUX3 1019 aa11.28□□□□□ -0.6
ATL1-202ENST00000441560 CNTROBQ8N137 903 aa11.28□□□□□ -0.6
ATL1-202ENST00000441560 MSL3Q8N5Y2 521 aaKnown RBP11.28□□□□□ -0.6
ATL1-202ENST00000441560 ODF2LQ9ULJ1 636 aa11.28□□□□□ -0.6
ATL1-202ENST00000441560 CDK12Q9NYV4 1490 aaPredicted RBP11.28□□□□□ -0.6
ATL1-202ENST00000441560 SKAP2O75563 359 aaPredicted RBP11.28□□□□□ -0.6
ATL1-202ENST00000441560 SERPINC1P01008 464 aa11.28□□□□□ -0.6
ATL1-202ENST00000441560 MYBL2P10244 700 aa11.28□□□□□ -0.6
ATL1-202ENST00000441560 CCT2P78371 535 aaKnown RBP11.28□□□□□ -0.6
ATL1-202ENST00000441560 RESTQ13127 1097 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms