RNA–Protein interactions for RNA: ENST00000441542.6

HDAC9-214, Transcript of histone deacetylase 9, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HDAC9, Length 3,210 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-214ENST00000441542 GJB4Q9NTQ9 266 aa8.7□□□□□ -1.02
HDAC9-214ENST00000441542 PARP3Q9Y6F1 533 aa8.7□□□□□ -1.02
HDAC9-214ENST00000441542 ELP1O95163 1332 aa8.7□□□□□ -1.02
HDAC9-214ENST00000441542 SSH2Q76I76 1423 aa8.69□□□□□ -1.02
HDAC9-214ENST00000441542 GLRX3O76003 335 aaKnown RBP8.69□□□□□ -1.02
HDAC9-214ENST00000441542 NDUFA8P51970 172 aa8.69□□□□□ -1.02
HDAC9-214ENST00000441542 TEFQ10587 303 aa8.69□□□□□ -1.02
HDAC9-214ENST00000441542 RESTQ13127 1097 aa8.69□□□□□ -1.02
HDAC9-214ENST00000441542 LONRF3Q496Y0 759 aa8.69□□□□□ -1.02
HDAC9-214ENST00000441542 CCDC158Q5M9N0 1113 aa8.69□□□□□ -1.02
HDAC9-214ENST00000441542 NCAPGQ9BPX3 1015 aa8.69□□□□□ -1.02
HDAC9-214ENST00000441542 FUT8Q9BYC5 575 aa8.69□□□□□ -1.02
HDAC9-214ENST00000441542 EFCAB8A8MWE9 144 aa8.69□□□□□ -1.02
HDAC9-214ENST00000441542 TOB2Q14106 344 aaPredicted RBP8.69□□□□□ -1.02
HDAC9-214ENST00000441542 NBPF6Q5VWK0 638 aa8.69□□□□□ -1.02
HDAC9-214ENST00000441542 CNNM3Q8NE01 707 aa8.69□□□□□ -1.02
HDAC9-214ENST00000441542 KLHDC4Q8TBB5 520 aa8.69□□□□□ -1.02
HDAC9-214ENST00000441542 NBPF4Q96M43 638 aa8.69□□□□□ -1.02
HDAC9-214ENST00000441542 POLD4Q9HCU8 107 aa8.69□□□□□ -1.02
HDAC9-214ENST00000441542 ATG3Q9NT62 314 aa8.69□□□□□ -1.02
HDAC9-214ENST00000441542 LTBP4Q8N2S1 1624 aa8.69□□□□□ -1.02
HDAC9-214ENST00000441542 SPHKAPQ2M3C7 1700 aa8.69□□□□□ -1.02
HDAC9-214ENST00000441542 TULP4Q9NRJ4 1543 aa8.69□□□□□ -1.02
HDAC9-214ENST00000441542 A0A0U1RQJ8 604 aa8.69□□□□□ -1.02
HDAC9-214ENST00000441542 SLC3A2P08195 630 aaKnown RBP8.69□□□□□ -1.02
HDAC9-214ENST00000441542 APOBRQ0VD83 1088 aa8.69□□□□□ -1.02
HDAC9-214ENST00000441542 HDGFL1Q5TGJ6 251 aa8.69□□□□□ -1.02
HDAC9-214ENST00000441542 ZNF589Q86UQ0 364 aaPredicted RBP8.69□□□□□ -1.02
HDAC9-214ENST00000441542 ATRIPQ8WXE1 791 aa8.69□□□□□ -1.02
HDAC9-214ENST00000441542 DNAAF4Q8WXU2 420 aa8.69□□□□□ -1.02
HDAC9-214ENST00000441542 KIAA0232Q92628 1395 aa8.68□□□□□ -1.02
HDAC9-214ENST00000441542 WDHD1O75717 1129 aaPredicted RBP8.68□□□□□ -1.02
HDAC9-214ENST00000441542 RPS6KB1P23443 525 aa8.68□□□□□ -1.02
HDAC9-214ENST00000441542 PDE6BP35913 854 aa8.68□□□□□ -1.02
HDAC9-214ENST00000441542 HSPA2P54652 639 aa8.68□□□□□ -1.02
HDAC9-214ENST00000441542 AKAP17AQ02040 695 aaKnown RBP8.68□□□□□ -1.02
HDAC9-214ENST00000441542 MTF1Q14872 753 aa8.68□□□□□ -1.02
HDAC9-214ENST00000441542 MTHFSDQ2M296 383 aaKnown RBP8.68□□□□□ -1.02
HDAC9-214ENST00000441542 FBXW10Q5XX13 1052 aa8.68□□□□□ -1.02
HDAC9-214ENST00000441542 TOGARAM2Q6ZUX3 1019 aa8.68□□□□□ -1.02
HDAC9-214ENST00000441542 RIN2Q8WYP3 895 aaPredicted RBP8.68□□□□□ -1.02
HDAC9-214ENST00000441542 GOLGA1Q92805 767 aa8.68□□□□□ -1.02
HDAC9-214ENST00000441542 EXOC4Q96A65 974 aa8.68□□□□□ -1.02
HDAC9-214ENST00000441542 GEMIN8Q9NWZ8 242 aaKnown RBP8.68□□□□□ -1.02
HDAC9-214ENST00000441542 PPP2R2CQ9Y2T4 447 aa8.68□□□□□ -1.02
HDAC9-214ENST00000441542 AGLP35573 1532 aa8.68□□□□□ -1.02
HDAC9-214ENST00000441542 MAGEA9P43362 315 aa8.68□□□□□ -1.02
HDAC9-214ENST00000441542 FAM160A1Q05DH4 1040 aa8.68□□□□□ -1.02
HDAC9-214ENST00000441542 TRIM65Q6PJ69 517 aa8.68□□□□□ -1.02
HDAC9-214ENST00000441542 TMTC2Q8N394 836 aa8.68□□□□□ -1.02
HDAC9-214ENST00000441542 ABCB6Q9NP58 842 aa8.68□□□□□ -1.02
HDAC9-214ENST00000441542 ECHDC1Q9NTX5 307 aa8.68□□□□□ -1.02
HDAC9-214ENST00000441542 TLR7Q9NYK1 1049 aaKnown RBP8.68□□□□□ -1.02
HDAC9-214ENST00000441542 KIF24Q5T7B8 1368 aa8.68□□□□□ -1.02
HDAC9-214ENST00000441542 PSDA5PKW4 1024 aaPredicted RBP8.67□□□□□ -1.02
HDAC9-214ENST00000441542 ZMYND10O75800 440 aa8.67□□□□□ -1.02
HDAC9-214ENST00000441542 IVLP07476 585 aa8.67□□□□□ -1.02
HDAC9-214ENST00000441542 NECTIN1Q15223 517 aa8.67□□□□□ -1.02
HDAC9-214ENST00000441542 KIF4BQ2VIQ3 1234 aa8.67□□□□□ -1.02
HDAC9-214ENST00000441542 RBM43Q6ZSC3 357 aaKnown RBP8.67□□□□□ -1.02
HDAC9-214ENST00000441542 C9orf78Q9NZ63 289 aaPredicted RBP8.67□□□□□ -1.02
HDAC9-214ENST00000441542 TTC21BQ7Z4L5 1316 aa8.67□□□□□ -1.02
HDAC9-214ENST00000441542 CTAGE5O15320 804 aa8.67□□□□□ -1.02
HDAC9-214ENST00000441542 ADRA2BP18089 450 aa8.67□□□□□ -1.02
HDAC9-214ENST00000441542 ATP2B1P20020 1258 aa8.67□□□□□ -1.02
HDAC9-214ENST00000441542 CHMP4BP1P59074 171 aa8.67□□□□□ -1.02
HDAC9-214ENST00000441542 NUTM2GQ5VZR2 741 aa8.67□□□□□ -1.02
HDAC9-214ENST00000441542 CTR9Q6PD62 1173 aa8.67□□□□□ -1.02
HDAC9-214ENST00000441542 GPR161Q8N6U8 529 aaKnown RBP8.67□□□□□ -1.02
HDAC9-214ENST00000441542 MRPS27Q92552 414 aaKnown RBP8.67□□□□□ -1.02
HDAC9-214ENST00000441542 GPATCH3Q96I76 525 aa8.67□□□□□ -1.02
HDAC9-214ENST00000441542 CENPHQ9H3R5 247 aa8.67□□□□□ -1.02
HDAC9-214ENST00000441542 FAM204AQ9H8W3 233 aa8.67□□□□□ -1.02
HDAC9-214ENST00000441542 PCDHA7Q9UN72 937 aa8.67□□□□□ -1.02
HDAC9-214ENST00000441542 PNPLA6Q8IY17 1366 aa8.67□□□□□ -1.02
HDAC9-214ENST00000441542 PTPDC1A2A3K4 754 aa8.67□□□□□ -1.02
HDAC9-214ENST00000441542 PSEN1P49768 467 aa8.67□□□□□ -1.02
HDAC9-214ENST00000441542 ATP2B2Q01814 1243 aa8.67□□□□□ -1.02
HDAC9-214ENST00000441542 PLEKHO1Q53GL0 409 aaPredicted RBP8.67□□□□□ -1.02
HDAC9-214ENST00000441542 TRMT44Q8IYL2 757 aaKnown RBP8.67□□□□□ -1.02
HDAC9-214ENST00000441542 PNKPQ96T60 521 aa8.67□□□□□ -1.02
HDAC9-214ENST00000441542 OSBPL5Q9H0X9 879 aaPredicted RBP8.67□□□□□ -1.02
HDAC9-214ENST00000441542 FANCLQ9NW38 375 aa8.67□□□□□ -1.02
HDAC9-214ENST00000441542 AKAP2Q9Y2D5 859 aa8.67□□□□□ -1.02
HDAC9-214ENST00000441542 PI4KAP2A4QPH2 592 aa8.66□□□□□ -1.02
HDAC9-214ENST00000441542 VWA3AA6NCI4 1184 aa8.66□□□□□ -1.02
HDAC9-214ENST00000441542 SCRN1Q12765 414 aa8.66□□□□□ -1.02
HDAC9-214ENST00000441542 PI4KAP1Q8N8J0 262 aa8.66□□□□□ -1.02
HDAC9-214ENST00000441542 CLIC4Q9Y696 253 aa8.66□□□□□ -1.02
HDAC9-214ENST00000441542 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.66□□□□□ -1.02
HDAC9-214ENST00000441542 H0YHG0 523 aa8.66□□□□□ -1.02
HDAC9-214ENST00000441542 ZSCAN12O43309 604 aa8.66□□□□□ -1.02
HDAC9-214ENST00000441542 CAVIN2O95810 425 aa8.66□□□□□ -1.02
HDAC9-214ENST00000441542 TPM1P09493 284 aa8.66□□□□□ -1.02
HDAC9-214ENST00000441542 CCT5P48643 541 aa8.66□□□□□ -1.02
HDAC9-214ENST00000441542 AIMP1Q12904 312 aaKnown RBP8.66□□□□□ -1.02
HDAC9-214ENST00000441542 TSGA10IPQ3SY00 556 aa8.66□□□□□ -1.02
HDAC9-214ENST00000441542 SPECC1Q5M775 1068 aa8.66□□□□□ -1.02
HDAC9-214ENST00000441542 TXNDC2Q86VQ3 553 aa8.66□□□□□ -1.02
HDAC9-214ENST00000441542 ERC1Q8IUD2 1116 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms