RNA–Protein interactions for RNA: ENST00000440127.1

HMGB3P11-201, Transcript of high mobility group box 3 pseudogene 11, humanhuman

BASIC

Gene HMGB3P11, Length 604 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P11-201ENST00000440127 FAM26DQ5JW98 314 aa5.75□□□□□ -1.49
HMGB3P11-201ENST00000440127 ATCAYQ86WG3 371 aa5.75□□□□□ -1.49
HMGB3P11-201ENST00000440127 KRTAP9-2Q9BYQ4 174 aa5.75□□□□□ -1.49
HMGB3P11-201ENST00000440127 KRTAP9-6A0A140TA67 174 aa5.74□□□□□ -1.49
HMGB3P11-201ENST00000440127 H3BRJ5 948 aa5.74□□□□□ -1.49
HMGB3P11-201ENST00000440127 GSC2O15499 205 aa5.74□□□□□ -1.49
HMGB3P11-201ENST00000440127 DEAF1O75398 565 aaPredicted RBP5.74□□□□□ -1.49
HMGB3P11-201ENST00000440127 PIP4K2BP78356 416 aa5.74□□□□□ -1.49
HMGB3P11-201ENST00000440127 ATP11AP98196 1134 aa5.74□□□□□ -1.49
HMGB3P11-201ENST00000440127 UVSSAQ2YD98 709 aa5.74□□□□□ -1.49
HMGB3P11-201ENST00000440127 GLYCTKQ8IVS8 523 aa5.74□□□□□ -1.49
HMGB3P11-201ENST00000440127 CEP120Q8N960 986 aa5.74□□□□□ -1.49
HMGB3P11-201ENST00000440127 LACRTQ9GZZ8 138 aa5.74□□□□□ -1.49
HMGB3P11-201ENST00000440127 RASSF4Q9H2L5 321 aa5.74□□□□□ -1.49
HMGB3P11-201ENST00000440127 C1orf115Q9H7X2 142 aa5.74□□□□□ -1.49
HMGB3P11-201ENST00000440127 SEC31BQ9NQW1 1179 aa5.74□□□□□ -1.49
HMGB3P11-201ENST00000440127 TMEM63CQ9P1W3 806 aa5.74□□□□□ -1.49
HMGB3P11-201ENST00000440127 F8W735 103 aaPredicted RBP5.73□□□□□ -1.49
HMGB3P11-201ENST00000440127 NDUFB5O43674 189 aa5.73□□□□□ -1.49
HMGB3P11-201ENST00000440127 ITGB7P26010 798 aa5.73□□□□□ -1.49
HMGB3P11-201ENST00000440127 NOS3P29474 1203 aa5.73□□□□□ -1.49
HMGB3P11-201ENST00000440127 CD68P34810 354 aaPredicted RBP5.73□□□□□ -1.49
HMGB3P11-201ENST00000440127 PDE3BQ13370 1112 aa5.73□□□□□ -1.49
HMGB3P11-201ENST00000440127 SETDB1Q15047 1291 aa5.73□□□□□ -1.49
HMGB3P11-201ENST00000440127 ADAM19Q9H013 955 aa5.73□□□□□ -1.49
HMGB3P11-201ENST00000440127 OSGEPQ9NPF4 335 aa5.73□□□□□ -1.49
HMGB3P11-201ENST00000440127 KANSL3Q9P2N6 904 aa5.73□□□□□ -1.49
HMGB3P11-201ENST00000440127 BRPF3Q9ULD4 1205 aa5.73□□□□□ -1.49
HMGB3P11-201ENST00000440127 POLIQ9UNA4 740 aa5.73□□□□□ -1.49
HMGB3P11-201ENST00000440127 LINC01387J3KSC0 135 aa5.72□□□□□ -1.49
HMGB3P11-201ENST00000440127 PDE2AO00408 941 aaPredicted RBP5.72□□□□□ -1.49
HMGB3P11-201ENST00000440127 FSCN2O14926 492 aa5.72□□□□□ -1.49
HMGB3P11-201ENST00000440127 GLB1P16278 677 aa5.72□□□□□ -1.49
HMGB3P11-201ENST00000440127 COL13A1Q5TAT6 717 aaPredicted RBP5.72□□□□□ -1.49
HMGB3P11-201ENST00000440127 SSBP4Q9BWG4 385 aaPredicted RBP5.72□□□□□ -1.49
HMGB3P11-201ENST00000440127 SALL4Q9UJQ4 1053 aa5.72□□□□□ -1.49
HMGB3P11-201ENST00000440127 AMOTL2Q9Y2J4 779 aa5.72□□□□□ -1.49
HMGB3P11-201ENST00000440127 TNFRSF21O75509 655 aa5.71□□□□□ -1.5
HMGB3P11-201ENST00000440127 CYP2E1P05181 493 aaPredicted RBP5.71□□□□□ -1.5
HMGB3P11-201ENST00000440127 HNRNPUQ00839 825 aaKnown RBP eCLIP5.71□□□□□ -1.5
HMGB3P11-201ENST00000440127 PRSS36Q5K4E3 855 aa5.71□□□□□ -1.5
HMGB3P11-201ENST00000440127 HP1BP3Q5SSJ5 553 aaPredicted RBP5.71□□□□□ -1.5
HMGB3P11-201ENST00000440127 Q6ZS46 218 aa5.71□□□□□ -1.5
HMGB3P11-201ENST00000440127 ACAD11Q709F0 780 aa5.71□□□□□ -1.5
HMGB3P11-201ENST00000440127 ZC3HAV1Q7Z2W4 902 aaKnown RBP5.71□□□□□ -1.5
HMGB3P11-201ENST00000440127 GJD3Q8N144 294 aa5.71□□□□□ -1.5
HMGB3P11-201ENST00000440127 C1orf127Q8N9H9 656 aa5.71□□□□□ -1.5
HMGB3P11-201ENST00000440127 TMEM102Q8N9M5 508 aaPredicted RBP5.71□□□□□ -1.5
HMGB3P11-201ENST00000440127 CCER1Q8TC90 406 aaPredicted RBP5.71□□□□□ -1.5
HMGB3P11-201ENST00000440127 H3BRB1 525 aa5.7□□□□□ -1.5
HMGB3P11-201ENST00000440127 DHX15O43143 795 aaKnown RBP5.7□□□□□ -1.5
HMGB3P11-201ENST00000440127 ICMTO60725 284 aa5.7□□□□□ -1.5
HMGB3P11-201ENST00000440127 DUOXA2Q1HG44 320 aa5.7□□□□□ -1.5
HMGB3P11-201ENST00000440127 ANKRD34AQ69YU3 496 aa5.7□□□□□ -1.5
HMGB3P11-201ENST00000440127 DZIP1LQ8IYY4 767 aaKnown RBP5.7□□□□□ -1.5
HMGB3P11-201ENST00000440127 DDX54Q8TDD1 881 aaKnown RBP5.7□□□□□ -1.5
HMGB3P11-201ENST00000440127 BSNDQ8WZ55 320 aa5.7□□□□□ -1.5
HMGB3P11-201ENST00000440127 CITED4Q96RK1 184 aa5.7□□□□□ -1.5
HMGB3P11-201ENST00000440127 GGNBP2Q9H3C7 697 aa5.7□□□□□ -1.5
HMGB3P11-201ENST00000440127 TUT1Q9H6E5 874 aaKnown RBP5.7□□□□□ -1.5
HMGB3P11-201ENST00000440127 DZANK1Q9NVP4 752 aa5.7□□□□□ -1.5
HMGB3P11-201ENST00000440127 PODXL2Q9NZ53 605 aa5.7□□□□□ -1.5
HMGB3P11-201ENST00000440127 CNTN3Q9P232 1028 aa5.7□□□□□ -1.5
HMGB3P11-201ENST00000440127 SART1O43290 800 aaKnown RBP5.69□□□□□ -1.5
HMGB3P11-201ENST00000440127 EPHA1P21709 976 aa5.69□□□□□ -1.5
HMGB3P11-201ENST00000440127 C19orf57Q0VDD7 668 aa5.69□□□□□ -1.5
HMGB3P11-201ENST00000440127 ZNF211Q13398 564 aaPredicted RBP5.69□□□□□ -1.5
HMGB3P11-201ENST00000440127 MTMR3Q13615 1198 aa5.69□□□□□ -1.5
HMGB3P11-201ENST00000440127 PRR23CQ6ZRP0 262 aa5.69□□□□□ -1.5
HMGB3P11-201ENST00000440127 MEGF10Q96KG7 1140 aa5.69□□□□□ -1.5
HMGB3P11-201ENST00000440127 POP1Q99575 1024 aaKnown RBP5.69□□□□□ -1.5
HMGB3P11-201ENST00000440127 OSMRQ99650 979 aa5.69□□□□□ -1.5
HMGB3P11-201ENST00000440127 ARID3AQ99856 593 aa5.69□□□□□ -1.5
HMGB3P11-201ENST00000440127 RNF208Q9H0X6 261 aa5.69□□□□□ -1.5
HMGB3P11-201ENST00000440127 ZFYVE1Q9HBF4 777 aa5.69□□□□□ -1.5
HMGB3P11-201ENST00000440127 FZD6O60353 706 aa5.68□□□□□ -1.5
HMGB3P11-201ENST00000440127 LRP8Q14114 963 aa5.68□□□□□ -1.5
HMGB3P11-201ENST00000440127 IKBKEQ14164 716 aa5.68□□□□□ -1.5
HMGB3P11-201ENST00000440127 PHLDB3Q6NSJ2 640 aa5.68□□□□□ -1.5
HMGB3P11-201ENST00000440127 FDX2Q6P4F2 183 aa5.68□□□□□ -1.5
HMGB3P11-201ENST00000440127 CARD10Q9BWT7 1032 aa5.68□□□□□ -1.5
HMGB3P11-201ENST00000440127 BHLHE41Q9C0J9 482 aaPredicted RBP5.68□□□□□ -1.5
HMGB3P11-201ENST00000440127 CHRDQ9H2X0 955 aa5.68□□□□□ -1.5
HMGB3P11-201ENST00000440127 SOX17Q9H6I2 414 aaPredicted RBP5.68□□□□□ -1.5
HMGB3P11-201ENST00000440127 HIF3AQ9Y2N7 669 aa5.68□□□□□ -1.5
HMGB3P11-201ENST00000440127 CDC25BP30305 580 aa5.67□□□□□ -1.5
HMGB3P11-201ENST00000440127 TXNDC11Q6PKC3 985 aa5.67□□□□□ -1.5
HMGB3P11-201ENST00000440127 NBPF11Q86T75 865 aa5.67□□□□□ -1.5
HMGB3P11-201ENST00000440127 KRTAP1-3Q8IUG1 177 aa5.67□□□□□ -1.5
HMGB3P11-201ENST00000440127 UTP4Q969X6 686 aaKnown RBP5.67□□□□□ -1.5
HMGB3P11-201ENST00000440127 ZFP64Q9NPA5 681 aa5.67□□□□□ -1.5
HMGB3P11-201ENST00000440127 SH2B1Q9NRF2 756 aaPredicted RBP5.67□□□□□ -1.5
HMGB3P11-201ENST00000440127 SOX13Q9UN79 622 aa5.67□□□□□ -1.5
HMGB3P11-201ENST00000440127 RAXQ9Y2V3 346 aa5.67□□□□□ -1.5
HMGB3P11-201ENST00000440127 MYO15BQ96JP2 1530 aa5.67□□□□□ -1.5
HMGB3P11-201ENST00000440127 A6NHS1 94 aa5.66□□□□□ -1.5
HMGB3P11-201ENST00000440127 EREGO14944 169 aa5.66□□□□□ -1.5
HMGB3P11-201ENST00000440127 GAS2O43903 313 aaKnown RBP5.66□□□□□ -1.5
HMGB3P11-201ENST00000440127 FSTP19883 344 aa5.66□□□□□ -1.5
HMGB3P11-201ENST00000440127 TRIM26Q12899 539 aaPredicted RBP5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms