RNA–Protein interactions for RNA: ENST00000439122.6

HDAC8-214, Transcript of histone deacetylase 8, humanhuman

TSL 2 BASIC

Gene HDAC8, Length 2,338 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-214ENST00000439122 SCARF1Q14162 830 aa14.31□□□□□ -0.12
HDAC8-214ENST00000439122 METTL24Q5JXM2 366 aa14.31□□□□□ -0.12
HDAC8-214ENST00000439122 LLPHQ9BRT6 129 aaKnown RBP14.31□□□□□ -0.12
HDAC8-214ENST00000439122 SPEF2Q9C093 1822 aa14.31□□□□□ -0.12
HDAC8-214ENST00000439122 OFD1O75665 1012 aa14.3□□□□□ -0.12
HDAC8-214ENST00000439122 ZAP70P43403 619 aa14.3□□□□□ -0.12
HDAC8-214ENST00000439122 FOSBP53539 338 aa14.3□□□□□ -0.12
HDAC8-214ENST00000439122 LDHAL6AQ6ZMR3 332 aa14.3□□□□□ -0.12
HDAC8-214ENST00000439122 NLRP10Q86W26 655 aa14.3□□□□□ -0.12
HDAC8-214ENST00000439122 SMARCC2Q8TAQ2 1214 aa14.3□□□□□ -0.12
HDAC8-214ENST00000439122 ITGA6P23229 1130 aa14.3□□□□□ -0.12
HDAC8-214ENST00000439122 RESTQ13127 1097 aa14.3□□□□□ -0.12
HDAC8-214ENST00000439122 MAP3K11Q16584 847 aa14.3□□□□□ -0.12
HDAC8-214ENST00000439122 HSP90AB3PQ58FF7 597 aa14.3□□□□□ -0.12
HDAC8-214ENST00000439122 PI16Q6UXB8 463 aa14.3□□□□□ -0.12
HDAC8-214ENST00000439122 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.3□□□□□ -0.12
HDAC8-214ENST00000439122 KLHL34Q8N239 644 aa14.3□□□□□ -0.12
HDAC8-214ENST00000439122 MPNDQ8N594 471 aa14.3□□□□□ -0.12
HDAC8-214ENST00000439122 NSUN7Q8NE18 718 aaKnown RBP14.3□□□□□ -0.12
HDAC8-214ENST00000439122 ZSCAN16Q9H4T2 348 aaPredicted RBP14.3□□□□□ -0.12
HDAC8-214ENST00000439122 GREM2Q9H772 168 aa14.3□□□□□ -0.12
HDAC8-214ENST00000439122 DACT1Q9NYF0 836 aa14.3□□□□□ -0.12
HDAC8-214ENST00000439122 PTPDC1A2A3K4 754 aa14.29□□□□□ -0.12
HDAC8-214ENST00000439122 KDM4AO75164 1064 aa14.29□□□□□ -0.12
HDAC8-214ENST00000439122 ZFYP08048 801 aaPredicted RBP14.29□□□□□ -0.12
HDAC8-214ENST00000439122 HAND2P61296 217 aa14.29□□□□□ -0.12
HDAC8-214ENST00000439122 ATP2B3Q16720 1220 aa14.29□□□□□ -0.12
HDAC8-214ENST00000439122 AGXT2Q9BYV1 514 aa14.29□□□□□ -0.12
HDAC8-214ENST00000439122 NCOA5Q9HCD5 579 aaKnown RBP14.29□□□□□ -0.12
HDAC8-214ENST00000439122 CNNM1Q9NRU3 951 aa14.29□□□□□ -0.12
HDAC8-214ENST00000439122 PPFIA3O75145 1194 aa14.29□□□□□ -0.12
HDAC8-214ENST00000439122 CTDNEP1O95476 244 aa14.29□□□□□ -0.12
HDAC8-214ENST00000439122 HMGN5P82970 282 aaKnown RBP14.29□□□□□ -0.12
HDAC8-214ENST00000439122 TTLL11Q8NHH1 800 aa14.29□□□□□ -0.12
HDAC8-214ENST00000439122 BICD2Q8TD16 824 aa14.29□□□□□ -0.12
HDAC8-214ENST00000439122 SLC4A9Q96Q91 983 aa14.29□□□□□ -0.12
HDAC8-214ENST00000439122 TNMDQ9H2S6 317 aa14.29□□□□□ -0.12
HDAC8-214ENST00000439122 CTNNA3Q9UI47 895 aa14.29□□□□□ -0.12
HDAC8-214ENST00000439122 ITGB4P16144 1822 aa14.28□□□□□ -0.12
HDAC8-214ENST00000439122 NHSL1Q5SYE7 1610 aa14.28□□□□□ -0.12
HDAC8-214ENST00000439122 CYP19A1P11511 503 aaPredicted RBP14.28□□□□□ -0.12
HDAC8-214ENST00000439122 CTSWP56202 376 aa14.28□□□□□ -0.12
HDAC8-214ENST00000439122 CEBPZQ03701 1054 aaKnown RBP14.28□□□□□ -0.12
HDAC8-214ENST00000439122 IMMTQ16891 758 aaKnown RBP14.28□□□□□ -0.12
HDAC8-214ENST00000439122 CKAP2LQ8IYA6 745 aa14.28□□□□□ -0.12
HDAC8-214ENST00000439122 TRMT112Q9UI30 125 aaKnown RBP14.28□□□□□ -0.12
HDAC8-214ENST00000439122 CFAP45Q9UL16 551 aa14.28□□□□□ -0.12
HDAC8-214ENST00000439122 ZBTB1Q9Y2K1 713 aa14.28□□□□□ -0.12
HDAC8-214ENST00000439122 KIF3AQ9Y496 699 aa14.28□□□□□ -0.12
HDAC8-214ENST00000439122 RIPOR2Q9Y4F9 1068 aa14.28□□□□□ -0.12
HDAC8-214ENST00000439122 CDHR2Q9BYE9 1310 aa14.28□□□□□ -0.12
HDAC8-214ENST00000439122 ANKRD18BA2A2Z9 1011 aa14.27□□□□□ -0.12
HDAC8-214ENST00000439122 IRS4O14654 1257 aaPredicted RBP14.27□□□□□ -0.12
HDAC8-214ENST00000439122 PDIA3P30101 505 aaKnown RBP14.27□□□□□ -0.12
HDAC8-214ENST00000439122 PGBD1Q96JS3 809 aa14.27□□□□□ -0.12
HDAC8-214ENST00000439122 PUS7LQ9H0K6 701 aaKnown RBP14.27□□□□□ -0.12
HDAC8-214ENST00000439122 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.27□□□□□ -0.12
HDAC8-214ENST00000439122 FGAP02671 866 aa14.27□□□□□ -0.13
HDAC8-214ENST00000439122 APPBP2Q92624 585 aa14.27□□□□□ -0.13
HDAC8-214ENST00000439122 DDX19AQ9NUU7 478 aaKnown RBP14.27□□□□□ -0.13
HDAC8-214ENST00000439122 BCL9O00512 1426 aa14.27□□□□□ -0.13
HDAC8-214ENST00000439122 RIC1Q4ADV7 1423 aa14.27□□□□□ -0.13
HDAC8-214ENST00000439122 EXOC5O00471 708 aa14.26□□□□□ -0.13
HDAC8-214ENST00000439122 FOXP2O15409 715 aa14.26□□□□□ -0.13
HDAC8-214ENST00000439122 NR1I2O75469 434 aa14.26□□□□□ -0.13
HDAC8-214ENST00000439122 NAA16Q6N069 864 aaPredicted RBP14.26□□□□□ -0.13
HDAC8-214ENST00000439122 ZNF274Q96GC6 653 aaPredicted RBP14.26□□□□□ -0.13
HDAC8-214ENST00000439122 TBC1D2BQ9UPU7 963 aa14.26□□□□□ -0.13
HDAC8-214ENST00000439122 MCAMP43121 646 aa14.26□□□□□ -0.13
HDAC8-214ENST00000439122 TYRO3Q06418 890 aa14.26□□□□□ -0.13
HDAC8-214ENST00000439122 ZNF830Q96NB3 372 aaPredicted RBP14.26□□□□□ -0.13
HDAC8-214ENST00000439122 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.26□□□□□ -0.13
HDAC8-214ENST00000439122 KDM4FA0A1W2PPD8 638 aa14.25□□□□□ -0.13
HDAC8-214ENST00000439122 GPAA1O43292 621 aa14.25□□□□□ -0.13
HDAC8-214ENST00000439122 GPHNQ9NQX3 736 aaPredicted RBP14.25□□□□□ -0.13
HDAC8-214ENST00000439122 ABCC12Q96J65 1359 aa14.25□□□□□ -0.13
HDAC8-214ENST00000439122 GUCY1B3Q02153 619 aa14.25□□□□□ -0.13
HDAC8-214ENST00000439122 KIAA2012Q0VF49 1180 aa14.25□□□□□ -0.13
HDAC8-214ENST00000439122 DZIP3Q86Y13 1208 aaKnown RBP14.25□□□□□ -0.13
HDAC8-214ENST00000439122 FAM200AQ8TCP9 573 aa14.25□□□□□ -0.13
HDAC8-214ENST00000439122 CLSTN2Q9H4D0 955 aa14.25□□□□□ -0.13
HDAC8-214ENST00000439122 MRVI1Q9Y6F6 885 aa14.25□□□□□ -0.13
HDAC8-214ENST00000439122 DISP2A7MBM2 1401 aa14.24□□□□□ -0.13
HDAC8-214ENST00000439122 SALL1Q9NSC2 1324 aa14.24□□□□□ -0.13
HDAC8-214ENST00000439122 A0A0G2JS52 829 aa14.24□□□□□ -0.13
HDAC8-214ENST00000439122 ZNF213O14771 459 aa14.24□□□□□ -0.13
HDAC8-214ENST00000439122 CHMP4CQ96CF2 233 aa14.24□□□□□ -0.13
HDAC8-214ENST00000439122 R3HCC1Q9Y3T6 440 aaKnown RBP14.24□□□□□ -0.13
HDAC8-214ENST00000439122 PRC1O43663 620 aa14.24□□□□□ -0.13
HDAC8-214ENST00000439122 PDE8AO60658 829 aa14.24□□□□□ -0.13
HDAC8-214ENST00000439122 SLC9C2Q5TAH2 1124 aa14.24□□□□□ -0.13
HDAC8-214ENST00000439122 RALYLQ86SE5 291 aaKnown RBP14.24□□□□□ -0.13
HDAC8-214ENST00000439122 FTOQ9C0B1 505 aaKnown RBP eCLIP14.24□□□□□ -0.13
HDAC8-214ENST00000439122 LRP6O75581 1613 aa14.23□□□□□ -0.13
HDAC8-214ENST00000439122 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.23□□□□□ -0.13
HDAC8-214ENST00000439122 AP5Z1O43299 807 aa14.23□□□□□ -0.13
HDAC8-214ENST00000439122 IDH1O75874 414 aaKnown RBP14.23□□□□□ -0.13
HDAC8-214ENST00000439122 PDE8BO95263 885 aa14.23□□□□□ -0.13
HDAC8-214ENST00000439122 ADD1P35611 737 aaKnown RBP14.23□□□□□ -0.13
HDAC8-214ENST00000439122 ANO6Q4KMQ2 910 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms