RNA–Protein interactions for RNA: ENST00000439106.5

PRAME-209, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS ALT2 TSL 3

Gene PRAME, Length 891 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-209ENST00000439106 MYH13Q9UKX3 1938 aa17.49■□□□□ 0.39
PRAME-209ENST00000439106 HSPA1AP0DMV8 641 aaKnown RBP17.48■□□□□ 0.39
PRAME-209ENST00000439106 HSPA1BP0DMV9 641 aaKnown RBP17.48■□□□□ 0.39
PRAME-209ENST00000439106 KCNJ4P48050 445 aa17.48■□□□□ 0.39
PRAME-209ENST00000439106 CCDC57Q2TAC2 916 aa17.48■□□□□ 0.39
PRAME-209ENST00000439106 ALDH1L2Q3SY69 923 aa17.48■□□□□ 0.39
PRAME-209ENST00000439106 TAF7LQ5H9L4 462 aa17.48■□□□□ 0.39
PRAME-209ENST00000439106 BICC1Q9H694 974 aaKnown RBP17.48■□□□□ 0.39
PRAME-209ENST00000439106 PGAP2Q9UHJ9 254 aa17.48■□□□□ 0.39
PRAME-209ENST00000439106 ECM29Q5VYK3 1845 aa17.48■□□□□ 0.39
PRAME-209ENST00000439106 UTYO14607 1347 aa17.47■□□□□ 0.39
PRAME-209ENST00000439106 ZNF609O15014 1411 aa17.47■□□□□ 0.39
PRAME-209ENST00000439106 THSD7BQ9C0I4 1608 aa17.47■□□□□ 0.39
PRAME-209ENST00000439106 ARAP2Q8WZ64 1704 aa17.47■□□□□ 0.39
PRAME-209ENST00000439106 USP17L3A6NCW0 530 aa17.47■□□□□ 0.39
PRAME-209ENST00000439106 USP17L4A6NCW7 530 aa17.47■□□□□ 0.39
PRAME-209ENST00000439106 PLIN1O60240 522 aa17.47■□□□□ 0.39
PRAME-209ENST00000439106 USP17L1Q7RTZ2 530 aa17.47■□□□□ 0.39
PRAME-209ENST00000439106 PODNQ7Z5L7 613 aa17.47■□□□□ 0.39
PRAME-209ENST00000439106 USP48Q86UV5 1035 aa17.47■□□□□ 0.39
PRAME-209ENST00000439106 PUS3Q9BZE2 481 aaKnown RBP17.47■□□□□ 0.39
PRAME-209ENST00000439106 IRS2Q9Y4H2 1338 aa17.47■□□□□ 0.39
PRAME-209ENST00000439106 RASSF10A6NK89 507 aa17.46■□□□□ 0.39
PRAME-209ENST00000439106 ADM5C9JUS6 153 aa17.46■□□□□ 0.39
PRAME-209ENST00000439106 CELF2O95319 508 aaKnown RBP17.46■□□□□ 0.39
PRAME-209ENST00000439106 GRM1Q13255 1194 aa17.46■□□□□ 0.39
PRAME-209ENST00000439106 LDHAL6AQ6ZMR3 332 aa17.46■□□□□ 0.39
PRAME-209ENST00000439106 PAXIP1Q6ZW49 1069 aaPredicted RBP17.46■□□□□ 0.39
PRAME-209ENST00000439106 ANKRD44Q8N8A2 993 aa17.46■□□□□ 0.39
PRAME-209ENST00000439106 ZC3H15Q8WU90 426 aaKnown RBP17.46■□□□□ 0.39
PRAME-209ENST00000439106 GMLQ99445 158 aa17.46■□□□□ 0.39
PRAME-209ENST00000439106 COA1Q9GZY4 146 aa17.46■□□□□ 0.39
PRAME-209ENST00000439106 CNNM1Q9NRU3 951 aa17.46■□□□□ 0.39
PRAME-209ENST00000439106 DEFB115Q30KQ5 88 aa17.45■□□□□ 0.38
PRAME-209ENST00000439106 DACT2Q5SW24 774 aa17.45■□□□□ 0.38
PRAME-209ENST00000439106 AGBL3Q8NEM8 1001 aa17.45■□□□□ 0.38
PRAME-209ENST00000439106 GGA3Q9NZ52 723 aa17.45■□□□□ 0.38
PRAME-209ENST00000439106 NOB1Q9ULX3 412 aaKnown RBP17.45■□□□□ 0.38
PRAME-209ENST00000439106 SCAF8Q9UPN6 1271 aaKnown RBP17.45■□□□□ 0.38
PRAME-209ENST00000439106 ZNF280AP59817 542 aaPredicted RBP17.44■□□□□ 0.38
PRAME-209ENST00000439106 CDC37L1Q7L3B6 337 aa17.44■□□□□ 0.38
PRAME-209ENST00000439106 KLHDC4Q8TBB5 520 aa17.44■□□□□ 0.38
PRAME-209ENST00000439106 USP44Q9H0E7 712 aa17.44■□□□□ 0.38
PRAME-209ENST00000439106 USP17L8P0C7I0 530 aa17.43■□□□□ 0.38
PRAME-209ENST00000439106 GTF2IP78347 998 aa17.43■□□□□ 0.38
PRAME-209ENST00000439106 RABL6Q3YEC7 729 aaPredicted RBP17.43■□□□□ 0.38
PRAME-209ENST00000439106 CYP4F22Q6NT55 531 aa17.43■□□□□ 0.38
PRAME-209ENST00000439106 KRT26Q7Z3Y9 468 aa17.43■□□□□ 0.38
PRAME-209ENST00000439106 MYOZ2Q9NPC6 264 aa17.43■□□□□ 0.38
PRAME-209ENST00000439106 JAG2Q9Y219 1238 aa17.43■□□□□ 0.38
PRAME-209ENST00000439106 TLL2Q9Y6L7 1015 aa17.43■□□□□ 0.38
PRAME-209ENST00000439106 CT47B1P0C2W7 299 aaPredicted RBP17.42■□□□□ 0.38
PRAME-209ENST00000439106 RARSP54136 660 aaKnown RBP17.42■□□□□ 0.38
PRAME-209ENST00000439106 HNRNPUQ00839 825 aaKnown RBP eCLIP17.42■□□□□ 0.38
PRAME-209ENST00000439106 SCARF1Q14162 830 aa17.42■□□□□ 0.38
PRAME-209ENST00000439106 ANGEL2Q5VTE6 544 aaKnown RBP17.42■□□□□ 0.38
PRAME-209ENST00000439106 TTLL5Q6EMB2 1281 aa17.42■□□□□ 0.38
PRAME-209ENST00000439106 DCPSQ96C86 337 aaKnown RBP17.42■□□□□ 0.38
PRAME-209ENST00000439106 CD209Q9NNX6 404 aa17.42■□□□□ 0.38
PRAME-209ENST00000439106 WDR33Q9C0J8 1336 aaKnown RBP17.42■□□□□ 0.38
PRAME-209ENST00000439106 LRRC24Q50LG9 513 aa17.41■□□□□ 0.38
PRAME-209ENST00000439106 STRIP1Q5VSL9 837 aa17.41■□□□□ 0.38
PRAME-209ENST00000439106 KIAA0825Q8IV33 1275 aa17.41■□□□□ 0.38
PRAME-209ENST00000439106 TNNQ9UQP3 1299 aa17.41■□□□□ 0.38
PRAME-209ENST00000439106 SASH1O94885 1247 aa17.4■□□□□ 0.38
PRAME-209ENST00000439106 NBPF9Q3BBW0 867 aa17.4■□□□□ 0.38
PRAME-209ENST00000439106 COL13A1Q5TAT6 717 aaPredicted RBP17.4■□□□□ 0.38
PRAME-209ENST00000439106 SAPCD2Q86UD0 394 aa17.4■□□□□ 0.38
PRAME-209ENST00000439106 CAPNS2Q96L46 248 aa17.4■□□□□ 0.38
PRAME-209ENST00000439106 GYG1P46976 350 aa17.39■□□□□ 0.37
PRAME-209ENST00000439106 C15orf52Q6ZUT6 534 aaKnown RBP17.39■□□□□ 0.37
PRAME-209ENST00000439106 ZNF804AQ7Z570 1209 aa17.39■□□□□ 0.37
PRAME-209ENST00000439106 CERS5Q8N5B7 392 aa17.39■□□□□ 0.37
PRAME-209ENST00000439106 RIPOR2Q9Y4F9 1068 aa17.39■□□□□ 0.37
PRAME-209ENST00000439106 MYO3BQ8WXR4 1341 aa17.39■□□□□ 0.37
PRAME-209ENST00000439106 FOXN1O15353 648 aa17.38■□□□□ 0.37
PRAME-209ENST00000439106 AOC2O75106 756 aa17.38■□□□□ 0.37
PRAME-209ENST00000439106 BCAR3O75815 825 aa17.38■□□□□ 0.37
PRAME-209ENST00000439106 SULF1Q8IWU6 871 aa17.38■□□□□ 0.37
PRAME-209ENST00000439106 API5Q9BZZ5 524 aaKnown RBP17.38■□□□□ 0.37
PRAME-209ENST00000439106 F8W031 263 aaPredicted RBP17.37■□□□□ 0.37
PRAME-209ENST00000439106 IL1R1P14778 569 aa17.37■□□□□ 0.37
PRAME-209ENST00000439106 BRPF1P55201 1214 aaPredicted RBP17.37■□□□□ 0.37
PRAME-209ENST00000439106 CDCA5Q96FF9 252 aa17.37■□□□□ 0.37
PRAME-209ENST00000439106 PCDHAC2Q9Y5I4 1007 aa17.37■□□□□ 0.37
PRAME-209ENST00000439106 PAPPA2Q9BXP8 1791 aa17.36■□□□□ 0.37
PRAME-209ENST00000439106 WNT10BO00744 389 aa17.36■□□□□ 0.37
PRAME-209ENST00000439106 UBTFL1P0CB47 393 aaPredicted RBP17.36■□□□□ 0.37
PRAME-209ENST00000439106 RFX5P48382 616 aaPredicted RBP17.36■□□□□ 0.37
PRAME-209ENST00000439106 METTL24Q5JXM2 366 aa17.36■□□□□ 0.37
PRAME-209ENST00000439106 PRAMEF18Q5VWM3 479 aa17.36■□□□□ 0.37
PRAME-209ENST00000439106 OGFOD1Q8N543 542 aa17.36■□□□□ 0.37
PRAME-209ENST00000439106 MEIS3Q99687 375 aa17.36■□□□□ 0.37
PRAME-209ENST00000439106 IQSEC3Q9UPP2 1182 aaPredicted RBP17.36■□□□□ 0.37
PRAME-209ENST00000439106 AKAP11Q9UKA4 1901 aa17.36■□□□□ 0.37
PRAME-209ENST00000439106 MROH5Q6ZUA9 1318 aa17.36■□□□□ 0.37
PRAME-209ENST00000439106 KIF16BQ96L93 1317 aa17.36■□□□□ 0.37
PRAME-209ENST00000439106 HUNKP57058 714 aa17.35■□□□□ 0.37
PRAME-209ENST00000439106 UBE4AQ14139 1066 aa17.35■□□□□ 0.37
PRAME-209ENST00000439106 VGLL2Q8N8G2 317 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms