RNA–Protein interactions for RNA: ENST00000438700.7

PTCHD3-201, Transcript of patched domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCHD3, Length 2,529 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-201ENST00000438700 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.55■□□□□ 0.24
PTCHD3-201ENST00000438700 LAMB2P55268 1798 aa16.54■□□□□ 0.24
PTCHD3-201ENST00000438700 SLC27A2O14975 620 aa16.54■□□□□ 0.24
PTCHD3-201ENST00000438700 GNPATO15228 680 aa16.54■□□□□ 0.24
PTCHD3-201ENST00000438700 CLEC4GQ6UXB4 293 aa16.54■□□□□ 0.24
PTCHD3-201ENST00000438700 AK7Q96M32 723 aa16.54■□□□□ 0.24
PTCHD3-201ENST00000438700 RPS6KA4O75676 772 aa16.54■□□□□ 0.24
PTCHD3-201ENST00000438700 SYT1P21579 422 aa16.54■□□□□ 0.24
PTCHD3-201ENST00000438700 KCNB2Q92953 911 aa16.54■□□□□ 0.24
PTCHD3-201ENST00000438700 HAUS7Q99871 368 aa16.54■□□□□ 0.24
PTCHD3-201ENST00000438700 EP400Q96L91 3159 aa16.53■□□□□ 0.24
PTCHD3-201ENST00000438700 GADD45BO75293 160 aaPredicted RBP16.53■□□□□ 0.24
PTCHD3-201ENST00000438700 RIPOR2Q9Y4F9 1068 aa16.53■□□□□ 0.24
PTCHD3-201ENST00000438700 MED23Q9ULK4 1368 aa16.53■□□□□ 0.24
PTCHD3-201ENST00000438700 STX6O43752 255 aa16.53■□□□□ 0.24
PTCHD3-201ENST00000438700 MBD3O95983 291 aa16.53■□□□□ 0.24
PTCHD3-201ENST00000438700 METTL24Q5JXM2 366 aa16.53■□□□□ 0.24
PTCHD3-201ENST00000438700 NECAB1Q8N987 351 aa16.53■□□□□ 0.24
PTCHD3-201ENST00000438700 TM6SF1Q9BZW5 370 aa16.53■□□□□ 0.24
PTCHD3-201ENST00000438700 CNNM1Q9NRU3 951 aa16.53■□□□□ 0.24
PTCHD3-201ENST00000438700 AKAP2Q9Y2D5 859 aa16.53■□□□□ 0.24
PTCHD3-201ENST00000438700 ME3Q16798 604 aa16.52■□□□□ 0.24
PTCHD3-201ENST00000438700 DDX46Q7L014 1031 aaKnown RBP16.52■□□□□ 0.24
PTCHD3-201ENST00000438700 USP48Q86UV5 1035 aa16.52■□□□□ 0.24
PTCHD3-201ENST00000438700 BCL11BQ9C0K0 894 aaPredicted RBP16.52■□□□□ 0.24
PTCHD3-201ENST00000438700 LRP5O75197 1615 aa16.52■□□□□ 0.23
PTCHD3-201ENST00000438700 ZSCAN22P10073 491 aaPredicted RBP16.52■□□□□ 0.23
PTCHD3-201ENST00000438700 GJB2P29033 226 aa16.52■□□□□ 0.23
PTCHD3-201ENST00000438700 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.52■□□□□ 0.23
PTCHD3-201ENST00000438700 SRP68Q9UHB9 627 aaKnown RBP16.52■□□□□ 0.23
PTCHD3-201ENST00000438700 NOL7Q9UMY1 257 aaKnown RBP16.52■□□□□ 0.23
PTCHD3-201ENST00000438700 C4BP0C0L5 1744 aa16.52■□□□□ 0.23
PTCHD3-201ENST00000438700 ADORA1P30542 326 aa16.51■□□□□ 0.23
PTCHD3-201ENST00000438700 ST3GAL1Q11201 340 aa16.51■□□□□ 0.23
PTCHD3-201ENST00000438700 USPL1Q5W0Q7 1092 aa16.51■□□□□ 0.23
PTCHD3-201ENST00000438700 BICDL1Q6ZP65 573 aa16.51■□□□□ 0.23
PTCHD3-201ENST00000438700 CCDC129Q6ZRS4 1044 aa16.51■□□□□ 0.23
PTCHD3-201ENST00000438700 AMIGO3Q86WK7 504 aa16.51■□□□□ 0.23
PTCHD3-201ENST00000438700 RNF214Q8ND24 703 aa16.51■□□□□ 0.23
PTCHD3-201ENST00000438700 SEC62Q99442 399 aaKnown RBP16.51■□□□□ 0.23
PTCHD3-201ENST00000438700 BCL2L12Q9HB09 334 aa16.51■□□□□ 0.23
PTCHD3-201ENST00000438700 SNRKQ9NRH2 765 aa16.51■□□□□ 0.23
PTCHD3-201ENST00000438700 TPCN1Q9ULQ1 816 aa16.51■□□□□ 0.23
PTCHD3-201ENST00000438700 CNPY2Q9Y2B0 182 aa16.51■□□□□ 0.23
PTCHD3-201ENST00000438700 PDLIM2Q96JY6 352 aa16.51■□□□□ 0.23
PTCHD3-201ENST00000438700 NARFQ9UHQ1 456 aa16.51■□□□□ 0.23
PTCHD3-201ENST00000438700 RTCBQ9Y3I0 505 aaKnown RBP16.51■□□□□ 0.23
PTCHD3-201ENST00000438700 RNF20Q5VTR2 975 aa16.5■□□□□ 0.23
PTCHD3-201ENST00000438700 KRT27Q7Z3Y8 459 aa16.5■□□□□ 0.23
PTCHD3-201ENST00000438700 XAGE2Q96GT9 111 aa16.5■□□□□ 0.23
PTCHD3-201ENST00000438700 SPEF2Q9C093 1822 aa16.5■□□□□ 0.23
PTCHD3-201ENST00000438700 TAF5LO75529 589 aa16.5■□□□□ 0.23
PTCHD3-201ENST00000438700 GORABQ5T7V8 394 aa16.5■□□□□ 0.23
PTCHD3-201ENST00000438700 TBC1D9BQ66K14 1250 aa16.5■□□□□ 0.23
PTCHD3-201ENST00000438700 BLOC1S2Q6QNY1 142 aa16.5■□□□□ 0.23
PTCHD3-201ENST00000438700 SEC31BQ9NQW1 1179 aa16.5■□□□□ 0.23
PTCHD3-201ENST00000438700 SH2B1Q9NRF2 756 aaPredicted RBP16.5■□□□□ 0.23
PTCHD3-201ENST00000438700 GOLIM4O00461 696 aa16.49■□□□□ 0.23
PTCHD3-201ENST00000438700 PSMA5P28066 241 aa16.49■□□□□ 0.23
PTCHD3-201ENST00000438700 ATP2B3Q16720 1220 aa16.49■□□□□ 0.23
PTCHD3-201ENST00000438700 LRSAM1Q6UWE0 723 aa16.49■□□□□ 0.23
PTCHD3-201ENST00000438700 MPNDQ8N594 471 aa16.49■□□□□ 0.23
PTCHD3-201ENST00000438700 C4AP0C0L4 1744 aa16.49■□□□□ 0.23
PTCHD3-201ENST00000438700 ZPR1O75312 459 aa16.49■□□□□ 0.23
PTCHD3-201ENST00000438700 F13A1P00488 732 aa16.49■□□□□ 0.23
PTCHD3-201ENST00000438700 IFIT1P09914 478 aaKnown RBP16.49■□□□□ 0.23
PTCHD3-201ENST00000438700 HSP90B1P14625 803 aaKnown RBP16.49■□□□□ 0.23
PTCHD3-201ENST00000438700 ERFEQ4G0M1 354 aa16.49■□□□□ 0.23
PTCHD3-201ENST00000438700 CCDC152Q4G0S7 254 aa16.49■□□□□ 0.23
PTCHD3-201ENST00000438700 FAM196AQ6ZSG2 479 aa16.49■□□□□ 0.23
PTCHD3-201ENST00000438700 VGLL2Q8N8G2 317 aa16.49■□□□□ 0.23
PTCHD3-201ENST00000438700 ZSCAN31Q96LW9 406 aaPredicted RBP16.49■□□□□ 0.23
PTCHD3-201ENST00000438700 PAG1Q9NWQ8 432 aa16.49■□□□□ 0.23
PTCHD3-201ENST00000438700 UQCRHLA0A096LP55 91 aa16.48■□□□□ 0.23
PTCHD3-201ENST00000438700 RGL2O15211 777 aa16.48■□□□□ 0.23
PTCHD3-201ENST00000438700 UQCRHP07919 91 aa16.48■□□□□ 0.23
PTCHD3-201ENST00000438700 RFX7Q2KHR2 1363 aa16.48■□□□□ 0.23
PTCHD3-201ENST00000438700 SLFNL1Q499Z3 407 aa16.48■□□□□ 0.23
PTCHD3-201ENST00000438700 CASZ1Q86V15 1759 aa16.48■□□□□ 0.23
PTCHD3-201ENST00000438700 LRRC4BQ9NT99 713 aa16.48■□□□□ 0.23
PTCHD3-201ENST00000438700 VPS37CA5D8V6 355 aaPredicted RBP16.48■□□□□ 0.23
PTCHD3-201ENST00000438700 FIBPO43427 364 aa16.48■□□□□ 0.23
PTCHD3-201ENST00000438700 PHF14O94880 888 aa16.48■□□□□ 0.23
PTCHD3-201ENST00000438700 CCDC158Q5M9N0 1113 aa16.48■□□□□ 0.23
PTCHD3-201ENST00000438700 TTC39AQ5SRH9 613 aa16.48■□□□□ 0.23
PTCHD3-201ENST00000438700 KBTBD3Q8NAB2 608 aa16.48■□□□□ 0.23
PTCHD3-201ENST00000438700 ARHGEF1Q92888 912 aaKnown RBP16.48■□□□□ 0.23
PTCHD3-201ENST00000438700 COL24A1Q17RW2 1714 aa16.47■□□□□ 0.23
PTCHD3-201ENST00000438700 ZNF500O60304 480 aaPredicted RBP16.47■□□□□ 0.23
PTCHD3-201ENST00000438700 TRIM37O94972 964 aa16.47■□□□□ 0.23
PTCHD3-201ENST00000438700 PDE8BO95263 885 aa16.47■□□□□ 0.23
PTCHD3-201ENST00000438700 RPS6KB1P23443 525 aa16.47■□□□□ 0.23
PTCHD3-201ENST00000438700 STK3Q13188 491 aa16.47■□□□□ 0.23
PTCHD3-201ENST00000438700 RTL9Q8NET4 1388 aa16.46■□□□□ 0.23
PTCHD3-201ENST00000438700 HELBQ8NG08 1087 aaPredicted RBP16.46■□□□□ 0.23
PTCHD3-201ENST00000438700 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.46■□□□□ 0.23
PTCHD3-201ENST00000438700 MPHOSPH8Q99549 860 aa16.46■□□□□ 0.23
PTCHD3-201ENST00000438700 MTMR6Q9Y217 621 aa16.46■□□□□ 0.23
PTCHD3-201ENST00000438700 ZKSCAN5Q9Y2L8 839 aa16.46■□□□□ 0.23
PTCHD3-201ENST00000438700 MROH5Q6ZUA9 1318 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms