RNA–Protein interactions for RNA: ENST00000437966.3

CHRNA7-202, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

TSL 2

Gene CHRNA7, Length 1,788 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-202ENST00000437966 SNX21Q969T3 373 aa23.54■■□□□ 1.36
CHRNA7-202ENST00000437966 ZNF512BQ96KM6 892 aaPredicted RBP23.54■■□□□ 1.36
CHRNA7-202ENST00000437966 CCDC171Q6TFL3 1326 aa23.54■■□□□ 1.36
CHRNA7-202ENST00000437966 MED23Q9ULK4 1368 aa23.53■■□□□ 1.36
CHRNA7-202ENST00000437966 RNF113AO15541 343 aaKnown RBP23.53■■□□□ 1.36
CHRNA7-202ENST00000437966 UQCRFS1P1P0C7P4 283 aa23.53■■□□□ 1.36
CHRNA7-202ENST00000437966 GYG1P46976 350 aa23.53■■□□□ 1.36
CHRNA7-202ENST00000437966 RASEFQ8IZ41 740 aa23.53■■□□□ 1.36
CHRNA7-202ENST00000437966 RPGRQ92834 1020 aaKnown RBP23.53■■□□□ 1.36
CHRNA7-202ENST00000437966 PIH1D3Q9NQM4 214 aaKnown RBP23.53■■□□□ 1.36
CHRNA7-202ENST00000437966 HMG20BQ9P0W2 317 aa23.53■■□□□ 1.36
CHRNA7-202ENST00000437966 IQSEC3Q9UPP2 1182 aaPredicted RBP23.53■■□□□ 1.36
CHRNA7-202ENST00000437966 GRAPQ13588 217 aa23.52■■□□□ 1.36
CHRNA7-202ENST00000437966 SLC15A2Q16348 729 aa23.52■■□□□ 1.36
CHRNA7-202ENST00000437966 MCMDC2Q4G0Z9 681 aa23.52■■□□□ 1.36
CHRNA7-202ENST00000437966 GRAPLQ8TC17 118 aaPredicted RBP23.52■■□□□ 1.36
CHRNA7-202ENST00000437966 RFX7Q2KHR2 1363 aa23.52■■□□□ 1.36
CHRNA7-202ENST00000437966 MMP10P09238 476 aa23.52■■□□□ 1.36
CHRNA7-202ENST00000437966 KLRK1P26718 216 aa23.52■■□□□ 1.36
CHRNA7-202ENST00000437966 PRPF40BQ6NWY9 871 aaKnown RBP23.52■■□□□ 1.36
CHRNA7-202ENST00000437966 RASGRF1Q13972 1273 aa23.51■■□□□ 1.35
CHRNA7-202ENST00000437966 ZMYM1Q5SVZ6 1142 aa23.51■■□□□ 1.35
CHRNA7-202ENST00000437966 RBM8AQ9Y5S9 174 aaKnown RBP23.51■■□□□ 1.35
CHRNA7-202ENST00000437966 SNX14Q9Y5W7 946 aa23.51■■□□□ 1.35
CHRNA7-202ENST00000437966 ARAP2Q8WZ64 1704 aa23.5■■□□□ 1.35
CHRNA7-202ENST00000437966 EPB41L2O43491 1005 aaKnown RBP23.5■■□□□ 1.35
CHRNA7-202ENST00000437966 KCNJ4P48050 445 aa23.5■■□□□ 1.35
CHRNA7-202ENST00000437966 SF3B2Q13435 895 aaKnown RBP23.5■■□□□ 1.35
CHRNA7-202ENST00000437966 UBE4AQ14139 1066 aa23.5■■□□□ 1.35
CHRNA7-202ENST00000437966 SPATA5Q8NB90 893 aa23.5■■□□□ 1.35
CHRNA7-202ENST00000437966 MAP4K1Q92918 833 aa23.5■■□□□ 1.35
CHRNA7-202ENST00000437966 STK32BQ9NY57 414 aa23.5■■□□□ 1.35
CHRNA7-202ENST00000437966 AKAP11Q9UKA4 1901 aa23.5■■□□□ 1.35
CHRNA7-202ENST00000437966 M0R2C6 588 aa23.5■■□□□ 1.35
CHRNA7-202ENST00000437966 CRY2Q49AN0 593 aa23.5■■□□□ 1.35
CHRNA7-202ENST00000437966 SLKQ9H2G2 1235 aaPredicted RBP23.5■■□□□ 1.35
CHRNA7-202ENST00000437966 NEK4P51957 841 aa23.49■■□□□ 1.35
CHRNA7-202ENST00000437966 ANAPC15P60006 121 aa23.49■■□□□ 1.35
CHRNA7-202ENST00000437966 OSBP2Q969R2 916 aa23.49■■□□□ 1.35
CHRNA7-202ENST00000437966 HELLSQ9NRZ9 838 aa23.49■■□□□ 1.35
CHRNA7-202ENST00000437966 RGPD3A6NKT7 1758 aaPredicted RBP23.49■■□□□ 1.35
CHRNA7-202ENST00000437966 RGPD4Q7Z3J3 1758 aa23.49■■□□□ 1.35
CHRNA7-202ENST00000437966 WASHC4Q2M389 1173 aa23.48■■□□□ 1.35
CHRNA7-202ENST00000437966 RBM17Q96I25 401 aaKnown RBP23.48■■□□□ 1.35
CHRNA7-202ENST00000437966 UPF3BQ9BZI7 483 aaKnown RBP23.48■■□□□ 1.35
CHRNA7-202ENST00000437966 ANKRD2Q9GZV1 360 aa23.48■■□□□ 1.35
CHRNA7-202ENST00000437966 PARP3Q9Y6F1 533 aa23.48■■□□□ 1.35
CHRNA7-202ENST00000437966 A0A1B0GUL6 1792 aa23.48■■□□□ 1.35
CHRNA7-202ENST00000437966 IDH1O75874 414 aaKnown RBP23.47■■□□□ 1.35
CHRNA7-202ENST00000437966 NECTIN1Q15223 517 aa23.47■■□□□ 1.35
CHRNA7-202ENST00000437966 BAG6P46379 1132 aa23.47■■□□□ 1.35
CHRNA7-202ENST00000437966 VPS53Q5VIR6 699 aa23.47■■□□□ 1.35
CHRNA7-202ENST00000437966 CREB3L3Q68CJ9 461 aa23.47■■□□□ 1.35
CHRNA7-202ENST00000437966 FAM84BQ96KN1 310 aaPredicted RBP23.47■■□□□ 1.35
CHRNA7-202ENST00000437966 FOXD4L1Q9NU39 408 aa23.47■■□□□ 1.35
CHRNA7-202ENST00000437966 MAST3O60307 1309 aa23.47■■□□□ 1.35
CHRNA7-202ENST00000437966 PDGFDQ9GZP0 370 aaPredicted RBP23.46■■□□□ 1.35
CHRNA7-202ENST00000437966 ANKIB1Q9P2G1 1089 aa23.46■■□□□ 1.35
CHRNA7-202ENST00000437966 K7ELQ4 463 aaPredicted RBP23.45■■□□□ 1.34
CHRNA7-202ENST00000437966 TTF1Q15361 905 aaPredicted RBP23.45■■□□□ 1.34
CHRNA7-202ENST00000437966 WWC3Q9ULE0 1092 aa23.45■■□□□ 1.34
CHRNA7-202ENST00000437966 TAF6LQ9Y6J9 622 aa23.45■■□□□ 1.34
CHRNA7-202ENST00000437966 ZNF804BA4D1E1 1349 aa23.45■■□□□ 1.34
CHRNA7-202ENST00000437966 SLC27A2O14975 620 aa23.45■■□□□ 1.34
CHRNA7-202ENST00000437966 CPA1P15085 419 aa23.45■■□□□ 1.34
CHRNA7-202ENST00000437966 ADCK5Q3MIX3 580 aa23.45■■□□□ 1.34
CHRNA7-202ENST00000437966 CAVIN4Q5BKX8 364 aa23.45■■□□□ 1.34
CHRNA7-202ENST00000437966 SLC9C2Q5TAH2 1124 aa23.45■■□□□ 1.34
CHRNA7-202ENST00000437966 TXNRD3Q86VQ6 643 aa23.45■■□□□ 1.34
CHRNA7-202ENST00000437966 VPS37DQ86XT2 251 aa23.45■■□□□ 1.34
CHRNA7-202ENST00000437966 GPR101Q96P66 508 aaPredicted RBP23.45■■□□□ 1.34
CHRNA7-202ENST00000437966 PUS7LQ9H0K6 701 aaKnown RBP23.45■■□□□ 1.34
CHRNA7-202ENST00000437966 KLRG2A4D1S0 409 aaPredicted RBP23.44■■□□□ 1.34
CHRNA7-202ENST00000437966 ST18O60284 1047 aa23.44■■□□□ 1.34
CHRNA7-202ENST00000437966 IL17RAQ96F46 866 aa23.44■■□□□ 1.34
CHRNA7-202ENST00000437966 BRIP1Q9BX63 1249 aa23.44■■□□□ 1.34
CHRNA7-202ENST00000437966 DDX24Q9GZR7 859 aaKnown RBP eCLIP23.44■■□□□ 1.34
CHRNA7-202ENST00000437966 ZFYP08048 801 aaPredicted RBP23.43■■□□□ 1.34
CHRNA7-202ENST00000437966 ADD2P35612 726 aa23.43■■□□□ 1.34
CHRNA7-202ENST00000437966 GPSM2P81274 684 aa23.43■■□□□ 1.34
CHRNA7-202ENST00000437966 LRRFIP1Q32MZ4 808 aaKnown RBP23.43■■□□□ 1.34
CHRNA7-202ENST00000437966 NOL8Q76FK4 1167 aaKnown RBP23.43■■□□□ 1.34
CHRNA7-202ENST00000437966 KCNB2Q92953 911 aa23.43■■□□□ 1.34
CHRNA7-202ENST00000437966 HOXA10P31260 410 aaPredicted RBP23.42■■□□□ 1.34
CHRNA7-202ENST00000437966 FBXO33Q7Z6M2 555 aa23.42■■□□□ 1.34
CHRNA7-202ENST00000437966 TICAM2Q86XR7 235 aa23.42■■□□□ 1.34
CHRNA7-202ENST00000437966 GNL3LQ9NVN8 582 aaKnown RBP23.42■■□□□ 1.34
CHRNA7-202ENST00000437966 ZNF532Q9HCE3 1301 aa23.42■■□□□ 1.34
CHRNA7-202ENST00000437966 PDE6AP16499 860 aa23.42■■□□□ 1.34
CHRNA7-202ENST00000437966 APPBP2Q92624 585 aa23.42■■□□□ 1.34
CHRNA7-202ENST00000437966 MYO5AQ9Y4I1 1855 aaKnown RBP23.42■■□□□ 1.34
CHRNA7-202ENST00000437966 JAKMIP1Q96N16 626 aaKnown RBP23.41■■□□□ 1.34
CHRNA7-202ENST00000437966 HSPD1P10809 573 aaKnown RBP23.4■■□□□ 1.34
CHRNA7-202ENST00000437966 HIBADHP31937 336 aaKnown RBP23.4■■□□□ 1.34
CHRNA7-202ENST00000437966 COL9A3Q14050 684 aaPredicted RBP23.4■■□□□ 1.34
CHRNA7-202ENST00000437966 ZSCAN25Q6NSZ9 544 aa23.4■■□□□ 1.34
CHRNA7-202ENST00000437966 CRAMP1Q96RY5 1269 aa23.4■■□□□ 1.34
CHRNA7-202ENST00000437966 NSFL1CQ9UNZ2 370 aaKnown RBP23.4■■□□□ 1.34
CHRNA7-202ENST00000437966 ANKRD31Q8N7Z5 1873 aa23.4■■□□□ 1.34
CHRNA7-202ENST00000437966 COL1A1P02452 1464 aaPredicted RBP23.4■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms