RNA–Protein interactions for RNA: ENST00000437811.1

HLA-DPA1-243, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

Gene HLA-DPA1, Length 1,375 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-243ENST00000437811 ARID4AP29374 1257 aaPredicted RBP16.43■□□□□ 0.22
HLA-DPA1-243ENST00000437811 NMIQ13287 307 aaPredicted RBP16.43■□□□□ 0.22
HLA-DPA1-243ENST00000437811 UBE4AQ14139 1066 aa16.43■□□□□ 0.22
HLA-DPA1-243ENST00000437811 CCDC102BQ68D86 513 aa16.43■□□□□ 0.22
HLA-DPA1-243ENST00000437811 CWC27Q6UX04 472 aaKnown RBP16.43■□□□□ 0.22
HLA-DPA1-243ENST00000437811 CCDC125Q86Z20 511 aa16.43■□□□□ 0.22
HLA-DPA1-243ENST00000437811 PARP3Q9Y6F1 533 aa16.43■□□□□ 0.22
HLA-DPA1-243ENST00000437811 SNAP23O00161 211 aa16.42■□□□□ 0.22
HLA-DPA1-243ENST00000437811 HOXA10P31260 410 aaPredicted RBP16.42■□□□□ 0.22
HLA-DPA1-243ENST00000437811 PHKA1P46020 1223 aa16.42■□□□□ 0.22
HLA-DPA1-243ENST00000437811 SCARF1Q14162 830 aa16.42■□□□□ 0.22
HLA-DPA1-243ENST00000437811 MSL1Q68DK7 614 aa16.42■□□□□ 0.22
HLA-DPA1-243ENST00000437811 RBM17Q96I25 401 aaKnown RBP16.42■□□□□ 0.22
HLA-DPA1-243ENST00000437811 ANKRD2Q9GZV1 360 aa16.42■□□□□ 0.22
HLA-DPA1-243ENST00000437811 ANO2Q9NQ90 1003 aa16.42■□□□□ 0.22
HLA-DPA1-243ENST00000437811 MCAMP43121 646 aa16.41■□□□□ 0.22
HLA-DPA1-243ENST00000437811 BRIP1Q9BX63 1249 aa16.41■□□□□ 0.22
HLA-DPA1-243ENST00000437811 SNRKQ9NRH2 765 aa16.41■□□□□ 0.22
HLA-DPA1-243ENST00000437811 LRRC37AA6NMS7 1700 aa16.41■□□□□ 0.22
HLA-DPA1-243ENST00000437811 COL11A2P13942 1736 aaPredicted RBP16.41■□□□□ 0.22
HLA-DPA1-243ENST00000437811 MED23Q9ULK4 1368 aa16.41■□□□□ 0.22
HLA-DPA1-243ENST00000437811 A0A0D9SFI3 127 aa16.4■□□□□ 0.22
HLA-DPA1-243ENST00000437811 ZAP70P43403 619 aa16.4■□□□□ 0.22
HLA-DPA1-243ENST00000437811 FAM227BQ96M60 508 aa16.4■□□□□ 0.22
HLA-DPA1-243ENST00000437811 CRAMP1Q96RY5 1269 aa16.4■□□□□ 0.22
HLA-DPA1-243ENST00000437811 KIF2CQ99661 725 aa16.4■□□□□ 0.22
HLA-DPA1-243ENST00000437811 FKBP4Q02790 459 aaKnown RBP eCLIP16.39■□□□□ 0.21
HLA-DPA1-243ENST00000437811 LSG1Q9H089 658 aaKnown RBP16.39■□□□□ 0.21
HLA-DPA1-243ENST00000437811 ANTXR1Q9H6X2 564 aa16.39■□□□□ 0.21
HLA-DPA1-243ENST00000437811 MYH7P12883 1935 aa16.39■□□□□ 0.21
HLA-DPA1-243ENST00000437811 MCCP23508 829 aa16.38■□□□□ 0.21
HLA-DPA1-243ENST00000437811 PI16Q6UXB8 463 aa16.38■□□□□ 0.21
HLA-DPA1-243ENST00000437811 KIAA1211Q6ZU35 1233 aa16.38■□□□□ 0.21
HLA-DPA1-243ENST00000437811 ZNF804BA4D1E1 1349 aa16.38■□□□□ 0.21
HLA-DPA1-243ENST00000437811 DOCK2Q92608 1830 aa16.38■□□□□ 0.21
HLA-DPA1-243ENST00000437811 KCNJ4P48050 445 aa16.38■□□□□ 0.21
HLA-DPA1-243ENST00000437811 LRRFIP1Q32MZ4 808 aaKnown RBP16.38■□□□□ 0.21
HLA-DPA1-243ENST00000437811 HMG20BQ9P0W2 317 aa16.38■□□□□ 0.21
HLA-DPA1-243ENST00000437811 RNF113AO15541 343 aaKnown RBP16.37■□□□□ 0.21
HLA-DPA1-243ENST00000437811 BBOX1O75936 387 aa16.37■□□□□ 0.21
HLA-DPA1-243ENST00000437811 PDE6BP35913 854 aa16.37■□□□□ 0.21
HLA-DPA1-243ENST00000437811 BCAMP50895 628 aa16.37■□□□□ 0.21
HLA-DPA1-243ENST00000437811 RASGRF1Q13972 1273 aa16.37■□□□□ 0.21
HLA-DPA1-243ENST00000437811 TTF1Q15361 905 aaPredicted RBP16.37■□□□□ 0.21
HLA-DPA1-243ENST00000437811 ZMYM1Q5SVZ6 1142 aa16.37■□□□□ 0.21
HLA-DPA1-243ENST00000437811 TMC4Q7Z404 712 aa16.37■□□□□ 0.21
HLA-DPA1-243ENST00000437811 CCDC171Q6TFL3 1326 aa16.36■□□□□ 0.21
HLA-DPA1-243ENST00000437811 WTIPA6NIX2 430 aaPredicted RBP16.36■□□□□ 0.21
HLA-DPA1-243ENST00000437811 CYP2E1P05181 493 aaPredicted RBP16.36■□□□□ 0.21
HLA-DPA1-243ENST00000437811 ZFYP08048 801 aaPredicted RBP16.36■□□□□ 0.21
HLA-DPA1-243ENST00000437811 NPR1P16066 1061 aa16.36■□□□□ 0.21
HLA-DPA1-243ENST00000437811 BECN1Q14457 450 aa16.36■□□□□ 0.21
HLA-DPA1-243ENST00000437811 SPATA5Q8NB90 893 aa16.36■□□□□ 0.21
HLA-DPA1-243ENST00000437811 IL17RAQ96F46 866 aa16.36■□□□□ 0.21
HLA-DPA1-243ENST00000437811 HELLSQ9NRZ9 838 aa16.36■□□□□ 0.21
HLA-DPA1-243ENST00000437811 XDHP47989 1333 aa16.36■□□□□ 0.21
HLA-DPA1-243ENST00000437811 LTBP1Q14766 1721 aa16.35■□□□□ 0.21
HLA-DPA1-243ENST00000437811 CHGBP05060 677 aa16.35■□□□□ 0.21
HLA-DPA1-243ENST00000437811 SRGNP10124 158 aa16.35■□□□□ 0.21
HLA-DPA1-243ENST00000437811 HSPA4P34932 840 aa16.35■□□□□ 0.21
HLA-DPA1-243ENST00000437811 GYG1P46976 350 aa16.35■□□□□ 0.21
HLA-DPA1-243ENST00000437811 ANAPC15P60006 121 aa16.35■□□□□ 0.21
HLA-DPA1-243ENST00000437811 PTH1RQ03431 593 aa16.35■□□□□ 0.21
HLA-DPA1-243ENST00000437811 RABEP1Q15276 862 aa16.35■□□□□ 0.21
HLA-DPA1-243ENST00000437811 MCMDC2Q4G0Z9 681 aa16.35■□□□□ 0.21
HLA-DPA1-243ENST00000437811 CAVIN4Q5BKX8 364 aa16.35■□□□□ 0.21
HLA-DPA1-243ENST00000437811 FBXO33Q7Z6M2 555 aa16.35■□□□□ 0.21
HLA-DPA1-243ENST00000437811 PIH1D3Q9NQM4 214 aaKnown RBP16.35■□□□□ 0.21
HLA-DPA1-243ENST00000437811 GNL3LQ9NVN8 582 aaKnown RBP16.35■□□□□ 0.21
HLA-DPA1-243ENST00000437811 LEMD3Q9Y2U8 911 aa16.35■□□□□ 0.21
HLA-DPA1-243ENST00000437811 IRS2Q9Y4H2 1338 aa16.35■□□□□ 0.21
HLA-DPA1-243ENST00000437811 ZNF589Q86UQ0 364 aaPredicted RBP16.34■□□□□ 0.21
HLA-DPA1-243ENST00000437811 SLC51AQ86UW1 340 aa16.34■□□□□ 0.21
HLA-DPA1-243ENST00000437811 SLC16A10Q8TF71 515 aa16.34■□□□□ 0.21
HLA-DPA1-243ENST00000437811 FAM84BQ96KN1 310 aaPredicted RBP16.34■□□□□ 0.21
HLA-DPA1-243ENST00000437811 SEC62Q99442 399 aaKnown RBP16.34■□□□□ 0.21
HLA-DPA1-243ENST00000437811 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.34■□□□□ 0.21
HLA-DPA1-243ENST00000437811 MYO5AQ9Y4I1 1855 aaKnown RBP16.34■□□□□ 0.21
HLA-DPA1-243ENST00000437811 COL1A1P02452 1464 aaPredicted RBP16.34■□□□□ 0.21
HLA-DPA1-243ENST00000437811 MYH13Q9UKX3 1938 aa16.33■□□□□ 0.2
HLA-DPA1-243ENST00000437811 PPEF1O14829 653 aaPredicted RBP16.33■□□□□ 0.2
HLA-DPA1-243ENST00000437811 KLRK1P26718 216 aa16.33■□□□□ 0.2
HLA-DPA1-243ENST00000437811 GPSM2P81274 684 aa16.33■□□□□ 0.2
HLA-DPA1-243ENST00000437811 ZSCAN25Q6NSZ9 544 aa16.33■□□□□ 0.2
HLA-DPA1-243ENST00000437811 SNX21Q969T3 373 aa16.33■□□□□ 0.2
HLA-DPA1-243ENST00000437811 MASTLQ96GX5 879 aa16.33■□□□□ 0.2
HLA-DPA1-243ENST00000437811 PDGFDQ9GZP0 370 aaPredicted RBP16.33■□□□□ 0.2
HLA-DPA1-243ENST00000437811 ANKIB1Q9P2G1 1089 aa16.33■□□□□ 0.2
HLA-DPA1-243ENST00000437811 PALD1Q9ULE6 856 aa16.33■□□□□ 0.2
HLA-DPA1-243ENST00000437811 MAST3O60307 1309 aa16.33■□□□□ 0.2
HLA-DPA1-243ENST00000437811 SEMA3EO15041 775 aa16.32■□□□□ 0.2
HLA-DPA1-243ENST00000437811 ATP2B4P23634 1241 aa16.32■□□□□ 0.2
HLA-DPA1-243ENST00000437811 SLFNL1Q499Z3 407 aa16.32■□□□□ 0.2
HLA-DPA1-243ENST00000437811 C15orf52Q6ZUT6 534 aaKnown RBP16.32■□□□□ 0.2
HLA-DPA1-243ENST00000437811 SP8Q8IXZ3 490 aa16.32■□□□□ 0.2
HLA-DPA1-243ENST00000437811 APPBP2Q92624 585 aa16.32■□□□□ 0.2
HLA-DPA1-243ENST00000437811 MAP4K1Q92918 833 aa16.32■□□□□ 0.2
HLA-DPA1-243ENST00000437811 TBC1D2Q9BYX2 928 aa16.32■□□□□ 0.2
HLA-DPA1-243ENST00000437811 PODXL2Q9NZ53 605 aa16.32■□□□□ 0.2
HLA-DPA1-243ENST00000437811 PDS5AQ29RF7 1337 aaKnown RBP16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms