RNA–Protein interactions for RNA: ENST00000437737.3

LINC01088-201, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 5 BASIC

Gene LINC01088, Length 973 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-201ENST00000437737 DUSP27Q5VZP5 1158 aa18.21■□□□□ 0.51
LINC01088-201ENST00000437737 JARID2Q92833 1246 aaPredicted RBP18.21■□□□□ 0.51
LINC01088-201ENST00000437737 MXD3Q9BW11 206 aa18.21■□□□□ 0.51
LINC01088-201ENST00000437737 R3HDMLQ9H3Y0 253 aa18.21■□□□□ 0.51
LINC01088-201ENST00000437737 MYO3BQ8WXR4 1341 aa18.21■□□□□ 0.51
LINC01088-201ENST00000437737 MED23Q9ULK4 1368 aa18.2■□□□□ 0.5
LINC01088-201ENST00000437737 SASH1O94885 1247 aa18.2■□□□□ 0.5
LINC01088-201ENST00000437737 ALDH1A1P00352 501 aa18.2■□□□□ 0.5
LINC01088-201ENST00000437737 PCCAP05165 728 aaPredicted RBP18.2■□□□□ 0.5
LINC01088-201ENST00000437737 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.2■□□□□ 0.5
LINC01088-201ENST00000437737 TRIM17Q9Y577 477 aa18.2■□□□□ 0.5
LINC01088-201ENST00000437737 DACT2Q5SW24 774 aa18.19■□□□□ 0.5
LINC01088-201ENST00000437737 CCDC191Q8NCU4 936 aa18.19■□□□□ 0.5
LINC01088-201ENST00000437737 CDC5LQ99459 802 aaKnown RBP18.19■□□□□ 0.5
LINC01088-201ENST00000437737 CWC25Q9NXE8 425 aaPredicted RBP18.19■□□□□ 0.5
LINC01088-201ENST00000437737 ANGEL1Q9UNK9 670 aaKnown RBP18.19■□□□□ 0.5
LINC01088-201ENST00000437737 TRIM35Q9UPQ4 493 aa18.19■□□□□ 0.5
LINC01088-201ENST00000437737 MYH3P11055 1940 aa18.19■□□□□ 0.5
LINC01088-201ENST00000437737 RBBP6Q7Z6E9 1792 aaKnown RBP18.18■□□□□ 0.5
LINC01088-201ENST00000437737 SPRYD7Q5W111 196 aa18.18■□□□□ 0.5
LINC01088-201ENST00000437737 INTS3Q68E01 1043 aaKnown RBP18.18■□□□□ 0.5
LINC01088-201ENST00000437737 APOBEC3FQ8IUX4 373 aaKnown RBP18.18■□□□□ 0.5
LINC01088-201ENST00000437737 PHAXQ9H814 394 aaKnown RBP18.18■□□□□ 0.5
LINC01088-201ENST00000437737 POTEFA5A3E0 1075 aa18.17■□□□□ 0.5
LINC01088-201ENST00000437737 WTIPA6NIX2 430 aaPredicted RBP18.17■□□□□ 0.5
LINC01088-201ENST00000437737 STRIP1Q5VSL9 837 aa18.17■□□□□ 0.5
LINC01088-201ENST00000437737 MANSC4A6NHS7 340 aaPredicted RBP18.16■□□□□ 0.5
LINC01088-201ENST00000437737 OTOP1Q7RTM1 612 aa18.16■□□□□ 0.5
LINC01088-201ENST00000437737 CCT4P50991 539 aaKnown RBP18.15■□□□□ 0.5
LINC01088-201ENST00000437737 INHBEP58166 350 aa18.15■□□□□ 0.5
LINC01088-201ENST00000437737 LDLRAD1Q5T700 205 aa18.15■□□□□ 0.5
LINC01088-201ENST00000437737 IFNL1Q8IU54 200 aa18.15■□□□□ 0.5
LINC01088-201ENST00000437737 RUNDC1Q96C34 613 aa18.15■□□□□ 0.5
LINC01088-201ENST00000437737 COA1Q9GZY4 146 aa18.15■□□□□ 0.5
LINC01088-201ENST00000437737 MBIPQ9NS73 344 aa18.15■□□□□ 0.5
LINC01088-201ENST00000437737 MINPP1Q9UNW1 487 aa18.15■□□□□ 0.5
LINC01088-201ENST00000437737 FZD1Q9UP38 647 aa18.15■□□□□ 0.5
LINC01088-201ENST00000437737 MMP14P50281 582 aa18.14■□□□□ 0.49
LINC01088-201ENST00000437737 CTSWP56202 376 aa18.14■□□□□ 0.49
LINC01088-201ENST00000437737 KIAA0825Q8IV33 1275 aa18.14■□□□□ 0.49
LINC01088-201ENST00000437737 SLC10A4Q96EP9 437 aa18.14■□□□□ 0.49
LINC01088-201ENST00000437737 BSDC1Q9NW68 430 aaPredicted RBP18.14■□□□□ 0.49
LINC01088-201ENST00000437737 LAMB1P07942 1786 aa18.14■□□□□ 0.49
LINC01088-201ENST00000437737 COL1A1P02452 1464 aaPredicted RBP18.14■□□□□ 0.49
LINC01088-201ENST00000437737 RALBP1Q15311 655 aa18.13■□□□□ 0.49
LINC01088-201ENST00000437737 TTLL5Q6EMB2 1281 aa18.13■□□□□ 0.49
LINC01088-201ENST00000437737 ERO1AQ96HE7 468 aa18.13■□□□□ 0.49
LINC01088-201ENST00000437737 METTL22Q9BUU2 404 aaPredicted RBP18.13■□□□□ 0.49
LINC01088-201ENST00000437737 ECM29Q5VYK3 1845 aa18.13■□□□□ 0.49
LINC01088-201ENST00000437737 ELL2O00472 640 aaPredicted RBP18.12■□□□□ 0.49
LINC01088-201ENST00000437737 DDX58O95786 925 aaKnown RBP18.12■□□□□ 0.49
LINC01088-201ENST00000437737 ZBTB48P10074 688 aaPredicted RBP18.12■□□□□ 0.49
LINC01088-201ENST00000437737 WDR43Q15061 677 aaKnown RBP eCLIP18.12■□□□□ 0.49
LINC01088-201ENST00000437737 GREM2Q9H772 168 aa18.12■□□□□ 0.49
LINC01088-201ENST00000437737 PTPN22Q9Y2R2 807 aa18.12■□□□□ 0.49
LINC01088-201ENST00000437737 IGF2BP3O00425 579 aaKnown RBP eCLIP18.11■□□□□ 0.49
LINC01088-201ENST00000437737 TXNRD3Q86VQ6 643 aa18.11■□□□□ 0.49
LINC01088-201ENST00000437737 TTLL11Q8NHH1 800 aa18.11■□□□□ 0.49
LINC01088-201ENST00000437737 CD99L2Q8TCZ2 262 aa18.11■□□□□ 0.49
LINC01088-201ENST00000437737 WNK4Q96J92 1243 aa18.11■□□□□ 0.49
LINC01088-201ENST00000437737 DEFB129Q9H1M3 183 aa18.11■□□□□ 0.49
LINC01088-201ENST00000437737 LEMD3Q9Y2U8 911 aa18.11■□□□□ 0.49
LINC01088-201ENST00000437737 KIAA0100Q14667 2235 aaKnown RBP18.11■□□□□ 0.49
LINC01088-201ENST00000437737 PPP1R12BO60237 982 aaPredicted RBP18.1■□□□□ 0.49
LINC01088-201ENST00000437737 IGHMBP2P38935 993 aaKnown RBP18.1■□□□□ 0.49
LINC01088-201ENST00000437737 GTF2IP78347 998 aa18.1■□□□□ 0.49
LINC01088-201ENST00000437737 OTUD7BQ6GQQ9 843 aa18.1■□□□□ 0.49
LINC01088-201ENST00000437737 CLMNQ96JQ2 1002 aa18.1■□□□□ 0.49
LINC01088-201ENST00000437737 ZNF804BA4D1E1 1349 aa18.09■□□□□ 0.49
LINC01088-201ENST00000437737 EN2P19622 333 aaPredicted RBP18.09■□□□□ 0.49
LINC01088-201ENST00000437737 DLGAP5Q15398 846 aa18.09■□□□□ 0.49
LINC01088-201ENST00000437737 MAP3K11Q16584 847 aa18.09■□□□□ 0.49
LINC01088-201ENST00000437737 ZBED3Q96IU2 234 aaPredicted RBP18.09■□□□□ 0.49
LINC01088-201ENST00000437737 EFCC1Q9HA90 598 aa18.09■□□□□ 0.49
LINC01088-201ENST00000437737 MAP3K2Q9Y2U5 619 aa18.09■□□□□ 0.49
LINC01088-201ENST00000437737 KLRK1P26718 216 aa18.08■□□□□ 0.48
LINC01088-201ENST00000437737 FXR1P51114 621 aaKnown RBP eCLIP18.08■□□□□ 0.48
LINC01088-201ENST00000437737 CRHR2Q13324 411 aa18.08■□□□□ 0.48
LINC01088-201ENST00000437737 PPP2R3BQ9Y5P8 575 aa18.08■□□□□ 0.48
LINC01088-201ENST00000437737 SSC5DA1L4H1 1573 aa18.08■□□□□ 0.48
LINC01088-201ENST00000437737 ANP32CO43423 234 aa18.07■□□□□ 0.48
LINC01088-201ENST00000437737 KCNJ4P48050 445 aa18.07■□□□□ 0.48
LINC01088-201ENST00000437737 ARMC5Q96C12 935 aa18.07■□□□□ 0.48
LINC01088-201ENST00000437737 TMEM106CQ9BVX2 250 aa18.07■□□□□ 0.48
LINC01088-201ENST00000437737 ANKRD2Q9GZV1 360 aa18.07■□□□□ 0.48
LINC01088-201ENST00000437737 MYBBP1AQ9BQG0 1328 aaKnown RBP18.06■□□□□ 0.48
LINC01088-201ENST00000437737 MYO1BO43795 1136 aa18.06■□□□□ 0.48
LINC01088-201ENST00000437737 ZNF853P0CG23 659 aa18.06■□□□□ 0.48
LINC01088-201ENST00000437737 SP3Q02447 781 aa18.06■□□□□ 0.48
LINC01088-201ENST00000437737 NEXNQ0ZGT2 675 aa18.06■□□□□ 0.48
LINC01088-201ENST00000437737 SUPT20HL1Q3ZLR7 823 aa18.06■□□□□ 0.48
LINC01088-201ENST00000437737 CCDC30Q5VVM6 783 aa18.06■□□□□ 0.48
LINC01088-201ENST00000437737 MPHOSPH8Q99549 860 aa18.06■□□□□ 0.48
LINC01088-201ENST00000437737 IFT57Q9NWB7 429 aa18.06■□□□□ 0.48
LINC01088-201ENST00000437737 HTTP42858 3142 aa18.05■□□□□ 0.48
LINC01088-201ENST00000437737 CLRN2A0PK11 232 aa18.05■□□□□ 0.48
LINC01088-201ENST00000437737 UNCXA6NJT0 531 aa18.05■□□□□ 0.48
LINC01088-201ENST00000437737 IGKV5-2P06315 115 aa18.05■□□□□ 0.48
LINC01088-201ENST00000437737 IREB2P48200 963 aaKnown RBP18.05■□□□□ 0.48
LINC01088-201ENST00000437737 GNAI1P63096 354 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms