RNA–Protein interactions for RNA: ENST00000436976.1

HMGN1P19-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 19, humanhuman

BASIC

Gene HMGN1P19, Length 333 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P19-201ENST00000436976 ATP5J2-PTCD1G3V325 749 aa21.48■■□□□ 1.03
HMGN1P19-201ENST00000436976 SLC17A8Q8NDX2 589 aa21.48■■□□□ 1.03
HMGN1P19-201ENST00000436976 ANGEL1Q9UNK9 670 aaKnown RBP21.48■■□□□ 1.03
HMGN1P19-201ENST00000436976 INHBEP58166 350 aa21.47■■□□□ 1.03
HMGN1P19-201ENST00000436976 CHRDL2Q6WN34 429 aa21.47■■□□□ 1.03
HMGN1P19-201ENST00000436976 TMEM106CQ9BVX2 250 aa21.47■■□□□ 1.03
HMGN1P19-201ENST00000436976 EFCC1Q9HA90 598 aa21.47■■□□□ 1.03
HMGN1P19-201ENST00000436976 SSC5DA1L4H1 1573 aa21.46■■□□□ 1.03
HMGN1P19-201ENST00000436976 WTIPA6NIX2 430 aaPredicted RBP21.46■■□□□ 1.03
HMGN1P19-201ENST00000436976 IRS4O14654 1257 aaPredicted RBP21.46■■□□□ 1.03
HMGN1P19-201ENST00000436976 SASH1O94885 1247 aa21.46■■□□□ 1.03
HMGN1P19-201ENST00000436976 CRHR2Q13324 411 aa21.46■■□□□ 1.03
HMGN1P19-201ENST00000436976 PODNQ7Z5L7 613 aa21.46■■□□□ 1.03
HMGN1P19-201ENST00000436976 DACT2Q5SW24 774 aa21.45■■□□□ 1.02
HMGN1P19-201ENST00000436976 PLBD2Q8NHP8 589 aa21.45■■□□□ 1.02
HMGN1P19-201ENST00000436976 WNK4Q96J92 1243 aa21.45■■□□□ 1.02
HMGN1P19-201ENST00000436976 CLMNQ96JQ2 1002 aa21.45■■□□□ 1.02
HMGN1P19-201ENST00000436976 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.44■■□□□ 1.02
HMGN1P19-201ENST00000436976 RBM27Q9P2N5 1060 aaKnown RBP21.44■■□□□ 1.02
HMGN1P19-201ENST00000436976 MYH3P11055 1940 aa21.44■■□□□ 1.02
HMGN1P19-201ENST00000436976 NEFMP07197 916 aa21.43■■□□□ 1.02
HMGN1P19-201ENST00000436976 ZBTB48P10074 688 aaPredicted RBP21.43■■□□□ 1.02
HMGN1P19-201ENST00000436976 KRT24Q2M2I5 525 aa21.43■■□□□ 1.02
HMGN1P19-201ENST00000436976 SLC10A4Q96EP9 437 aa21.43■■□□□ 1.02
HMGN1P19-201ENST00000436976 PCGF6Q9BYE7 350 aa21.43■■□□□ 1.02
HMGN1P19-201ENST00000436976 CHPF2Q9P2E5 772 aa21.43■■□□□ 1.02
HMGN1P19-201ENST00000436976 UNC80Q8N2C7 3258 aa21.43■■□□□ 1.02
HMGN1P19-201ENST00000436976 XDHP47989 1333 aa21.42■■□□□ 1.02
HMGN1P19-201ENST00000436976 SP3Q02447 781 aa21.42■■□□□ 1.02
HMGN1P19-201ENST00000436976 MAP3K11Q16584 847 aa21.42■■□□□ 1.02
HMGN1P19-201ENST00000436976 GJA5P36382 358 aa21.41■■□□□ 1.02
HMGN1P19-201ENST00000436976 ANKRD13DQ6ZTN6 518 aa21.41■■□□□ 1.02
HMGN1P19-201ENST00000436976 APOBEC3FQ8IUX4 373 aaKnown RBP21.41■■□□□ 1.02
HMGN1P19-201ENST00000436976 ZBED3Q96IU2 234 aaPredicted RBP21.41■■□□□ 1.02
HMGN1P19-201ENST00000436976 PTPN18Q99952 460 aa21.41■■□□□ 1.02
HMGN1P19-201ENST00000436976 PTCH2Q9Y6C5 1203 aa21.41■■□□□ 1.02
HMGN1P19-201ENST00000436976 TRIM26Q12899 539 aaPredicted RBP21.4■■□□□ 1.02
HMGN1P19-201ENST00000436976 OGFOD1Q8N543 542 aa21.4■■□□□ 1.02
HMGN1P19-201ENST00000436976 COL1A1P02452 1464 aaPredicted RBP21.39■■□□□ 1.02
HMGN1P19-201ENST00000436976 ATP2B4P23634 1241 aa21.39■■□□□ 1.01
HMGN1P19-201ENST00000436976 TRIM28Q13263 835 aaKnown RBP21.39■■□□□ 1.01
HMGN1P19-201ENST00000436976 SLC4A8Q2Y0W8 1093 aa21.39■■□□□ 1.01
HMGN1P19-201ENST00000436976 SLC9C1Q4G0N8 1177 aa21.39■■□□□ 1.01
HMGN1P19-201ENST00000436976 MED23Q9ULK4 1368 aa21.38■■□□□ 1.01
HMGN1P19-201ENST00000436976 MYCP01106 439 aaPredicted RBP21.38■■□□□ 1.01
HMGN1P19-201ENST00000436976 CCDC85AQ96PX6 553 aaPredicted RBP21.38■■□□□ 1.01
HMGN1P19-201ENST00000436976 BABAM1Q9NWV8 329 aa21.38■■□□□ 1.01
HMGN1P19-201ENST00000436976 MYO3BQ8WXR4 1341 aa21.37■■□□□ 1.01
HMGN1P19-201ENST00000436976 STRIP1Q5VSL9 837 aa21.37■■□□□ 1.01
HMGN1P19-201ENST00000436976 FBXW7Q969H0 707 aa21.37■■□□□ 1.01
HMGN1P19-201ENST00000436976 PRO3102Q9H379 93 aa21.37■■□□□ 1.01
HMGN1P19-201ENST00000436976 NBPF11Q86T75 865 aa21.36■■□□□ 1.01
HMGN1P19-201ENST00000436976 ZBTB38Q8NAP3 1195 aaPredicted RBP21.36■■□□□ 1.01
HMGN1P19-201ENST00000436976 DEFB129Q9H1M3 183 aa21.36■■□□□ 1.01
HMGN1P19-201ENST00000436976 TESPA1A2RU30 521 aaPredicted RBP21.35■■□□□ 1.01
HMGN1P19-201ENST00000436976 KIAA0825Q8IV33 1275 aa21.35■■□□□ 1.01
HMGN1P19-201ENST00000436976 MAPK8IP3Q9UPT6 1336 aa21.34■■□□□ 1.01
HMGN1P19-201ENST00000436976 CCDC152Q4G0S7 254 aa21.34■■□□□ 1.01
HMGN1P19-201ENST00000436976 OTUD7BQ6GQQ9 843 aa21.34■■□□□ 1.01
HMGN1P19-201ENST00000436976 TXNRD3Q86VQ6 643 aa21.34■■□□□ 1.01
HMGN1P19-201ENST00000436976 SHISA4Q96DD7 197 aa21.34■■□□□ 1.01
HMGN1P19-201ENST00000436976 ANKRD18AQ8IVF6 992 aa21.33■■□□□ 1.01
HMGN1P19-201ENST00000436976 SH3TC2Q8TF17 1288 aa21.33■■□□□ 1.01
HMGN1P19-201ENST00000436976 JARID2Q92833 1246 aaPredicted RBP21.33■■□□□ 1.01
HMGN1P19-201ENST00000436976 PPP1R12BO60237 982 aaPredicted RBP21.32■■□□□ 1
HMGN1P19-201ENST00000436976 RIPK4P57078 832 aa21.32■■□□□ 1
HMGN1P19-201ENST00000436976 HDGFL1Q5TGJ6 251 aa21.32■■□□□ 1
HMGN1P19-201ENST00000436976 PCDHAC2Q9Y5I4 1007 aa21.32■■□□□ 1
HMGN1P19-201ENST00000436976 PDE8AO60658 829 aa21.31■■□□□ 1
HMGN1P19-201ENST00000436976 MMP14P50281 582 aa21.31■■□□□ 1
HMGN1P19-201ENST00000436976 UNCXA6NJT0 531 aa21.3■■□□□ 1
HMGN1P19-201ENST00000436976 USP2O75604 605 aaPredicted RBP21.3■■□□□ 1
HMGN1P19-201ENST00000436976 TTLL5Q6EMB2 1281 aa21.3■■□□□ 1
HMGN1P19-201ENST00000436976 DPF3Q92784 378 aa21.3■■□□□ 1
HMGN1P19-201ENST00000436976 MS4A4AQ96JQ5 239 aa21.3■■□□□ 1
HMGN1P19-201ENST00000436976 COA1Q9GZY4 146 aa21.3■■□□□ 1
HMGN1P19-201ENST00000436976 DBF4Q9UBU7 674 aaPredicted RBP21.3■■□□□ 1
HMGN1P19-201ENST00000436976 MINPP1Q9UNW1 487 aa21.3■■□□□ 1
HMGN1P19-201ENST00000436976 ALPK3Q96L96 1907 aa21.29■■□□□ 1
HMGN1P19-201ENST00000436976 VCANP13611 3396 aa21.29■■□□□ 1
HMGN1P19-201ENST00000436976 SOX1O00570 391 aaPredicted RBP21.29■■□□□ 1
HMGN1P19-201ENST00000436976 PCCAP05165 728 aaPredicted RBP21.29■■□□□ 1
HMGN1P19-201ENST00000436976 CCT4P50991 539 aaKnown RBP21.29■■□□□ 1
HMGN1P19-201ENST00000436976 NBPF12Q5TAG4 269 aaPredicted RBP21.29■■□□□ 1
HMGN1P19-201ENST00000436976 ARHGAP39Q9C0H5 1083 aa21.29■■□□□ 1
HMGN1P19-201ENST00000436976 AOX1Q06278 1338 aa21.29■■□□□ 1
HMGN1P19-201ENST00000436976 A0A1B0GUL6 1792 aa21.28■■□□□ 1
HMGN1P19-201ENST00000436976 CHL1O00533 1208 aa21.28■■□□□ 1
HMGN1P19-201ENST00000436976 KLRK1P26718 216 aa21.28■■□□□ 1
HMGN1P19-201ENST00000436976 MNX1P50219 401 aaPredicted RBP21.28■■□□□ 1
HMGN1P19-201ENST00000436976 PPP2R3BQ9Y5P8 575 aa21.28■■□□□ 1
HMGN1P19-201ENST00000436976 ZNF804BA4D1E1 1349 aa21.28■■□□□ 1
HMGN1P19-201ENST00000436976 HSP90B1P14625 803 aaKnown RBP21.27■■□□□ 1
HMGN1P19-201ENST00000436976 MTFR1Q15390 333 aa21.27■■□□□ 1
HMGN1P19-201ENST00000436976 BRI3BPQ8WY22 251 aa21.27■■□□□ 1
HMGN1P19-201ENST00000436976 IREB2P48200 963 aaKnown RBP21.26■□□□□ 0.99
HMGN1P19-201ENST00000436976 GTF2IP78347 998 aa21.26■□□□□ 0.99
HMGN1P19-201ENST00000436976 ARHGEF6Q15052 776 aa21.26■□□□□ 0.99
HMGN1P19-201ENST00000436976 DLGAP5Q15398 846 aa21.26■□□□□ 0.99
HMGN1P19-201ENST00000436976 TAF1CQ15572 869 aaPredicted RBP21.26■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms