RNA–Protein interactions for RNA: ENST00000436461.6

CALD1-209, Transcript of caldesmon 1, humanhuman

TSL 5

Gene CALD1, Length 1,614 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-209ENST00000436461 SOGA3Q5TF21 947 aa20.67■□□□□ 0.9
CALD1-209ENST00000436461 RTKN2Q8IZC4 609 aa20.67■□□□□ 0.9
CALD1-209ENST00000436461 LEMD3Q9Y2U8 911 aa20.67■□□□□ 0.9
CALD1-209ENST00000436461 NUCB1Q02818 461 aa20.67■□□□□ 0.9
CALD1-209ENST00000436461 UBE4AQ14139 1066 aa20.67■□□□□ 0.9
CALD1-209ENST00000436461 ARHGAP27Q6ZUM4 889 aa20.67■□□□□ 0.9
CALD1-209ENST00000436461 CLASRPQ8N2M8 674 aaKnown RBP20.67■□□□□ 0.9
CALD1-209ENST00000436461 OTUD7AQ8TE49 926 aaPredicted RBP20.67■□□□□ 0.9
CALD1-209ENST00000436461 ZNF277Q9NRM2 450 aaPredicted RBP20.67■□□□□ 0.9
CALD1-209ENST00000436461 CHD1LQ86WJ1 897 aa20.66■□□□□ 0.9
CALD1-209ENST00000436461 LPIN2Q92539 896 aa20.66■□□□□ 0.9
CALD1-209ENST00000436461 DBNDD2Q9BQY9 259 aa20.66■□□□□ 0.9
CALD1-209ENST00000436461 AKAP2Q9Y2D5 859 aa20.66■□□□□ 0.9
CALD1-209ENST00000436461 IRS2Q9Y4H2 1338 aa20.66■□□□□ 0.9
CALD1-209ENST00000436461 SLC5A1P13866 664 aa20.65■□□□□ 0.9
CALD1-209ENST00000436461 GYG1P46976 350 aa20.65■□□□□ 0.9
CALD1-209ENST00000436461 PRELPP51888 382 aa20.65■□□□□ 0.9
CALD1-209ENST00000436461 FKBP4Q02790 459 aaKnown RBP eCLIP20.65■□□□□ 0.9
CALD1-209ENST00000436461 XAGE2Q96GT9 111 aa20.65■□□□□ 0.9
CALD1-209ENST00000436461 RTFDC1Q9BY42 306 aaPredicted RBP20.65■□□□□ 0.9
CALD1-209ENST00000436461 TAOK3Q9H2K8 898 aa20.65■□□□□ 0.9
CALD1-209ENST00000436461 GPR108Q9NPR9 543 aa20.65■□□□□ 0.9
CALD1-209ENST00000436461 DBNLQ9UJU6 430 aaKnown RBP20.65■□□□□ 0.9
CALD1-209ENST00000436461 IFIT1P09914 478 aaKnown RBP20.64■□□□□ 0.9
CALD1-209ENST00000436461 AOC3Q16853 763 aa20.64■□□□□ 0.9
CALD1-209ENST00000436461 WASHC4Q2M389 1173 aa20.64■□□□□ 0.9
CALD1-209ENST00000436461 ZBTB47Q9UFB7 747 aaPredicted RBP20.64■□□□□ 0.9
CALD1-209ENST00000436461 PSMD1Q99460 953 aa20.64■□□□□ 0.89
CALD1-209ENST00000436461 COL4A5P29400 1685 aa20.63■□□□□ 0.89
CALD1-209ENST00000436461 IFIT2P09913 472 aaKnown RBP20.63■□□□□ 0.89
CALD1-209ENST00000436461 BCAMP50895 628 aa20.63■□□□□ 0.89
CALD1-209ENST00000436461 TSHZ3Q63HK5 1081 aa20.63■□□□□ 0.89
CALD1-209ENST00000436461 SBF1O95248 1867 aa20.63■□□□□ 0.89
CALD1-209ENST00000436461 MED23Q9ULK4 1368 aa20.63■□□□□ 0.89
CALD1-209ENST00000436461 PPIP5K2O43314 1243 aa20.62■□□□□ 0.89
CALD1-209ENST00000436461 PDE4AP27815 886 aa20.62■□□□□ 0.89
CALD1-209ENST00000436461 DOK7Q18PE1 504 aa20.62■□□□□ 0.89
CALD1-209ENST00000436461 GRIPAP1Q4V328 841 aa20.62■□□□□ 0.89
CALD1-209ENST00000436461 FAM84BQ96KN1 310 aaPredicted RBP20.62■□□□□ 0.89
CALD1-209ENST00000436461 ZC3H12CQ9C0D7 883 aaKnown RBP20.62■□□□□ 0.89
CALD1-209ENST00000436461 CHD4Q14839 1912 aa20.62■□□□□ 0.89
CALD1-209ENST00000436461 PHKA1P46020 1223 aa20.61■□□□□ 0.89
CALD1-209ENST00000436461 SUPT20HQ8NEM7 779 aa20.61■□□□□ 0.89
CALD1-209ENST00000436461 EYA3Q99504 573 aa20.61■□□□□ 0.89
CALD1-209ENST00000436461 IQSEC3Q9UPP2 1182 aaPredicted RBP20.61■□□□□ 0.89
CALD1-209ENST00000436461 DBNDD1Q9H9R9 158 aa20.6■□□□□ 0.89
CALD1-209ENST00000436461 MYH13Q9UKX3 1938 aa20.6■□□□□ 0.89
CALD1-209ENST00000436461 IARSP41252 1262 aaKnown RBP20.6■□□□□ 0.89
CALD1-209ENST00000436461 KIAA2012Q0VF49 1180 aa20.6■□□□□ 0.89
CALD1-209ENST00000436461 GORABQ5T7V8 394 aa20.6■□□□□ 0.89
CALD1-209ENST00000436461 CCDC102BQ68D86 513 aa20.6■□□□□ 0.89
CALD1-209ENST00000436461 LTBP3Q9NS15 1303 aa20.59■□□□□ 0.89
CALD1-209ENST00000436461 VPS37DQ86XT2 251 aa20.59■□□□□ 0.89
CALD1-209ENST00000436461 LARGE2Q8N3Y3 721 aa20.59■□□□□ 0.89
CALD1-209ENST00000436461 SALL3Q9BXA9 1300 aa20.58■□□□□ 0.89
CALD1-209ENST00000436461 HIBADHP31937 336 aaKnown RBP20.58■□□□□ 0.89
CALD1-209ENST00000436461 CAVIN4Q5BKX8 364 aa20.58■□□□□ 0.89
CALD1-209ENST00000436461 C15orf52Q6ZUT6 534 aaKnown RBP20.58■□□□□ 0.89
CALD1-209ENST00000436461 FBXO33Q7Z6M2 555 aa20.58■□□□□ 0.89
CALD1-209ENST00000436461 SCN9AQ15858 1988 aa20.58■□□□□ 0.89
CALD1-209ENST00000436461 CD209Q9NNX6 404 aa20.57■□□□□ 0.88
CALD1-209ENST00000436461 JAG2Q9Y219 1238 aa20.57■□□□□ 0.88
CALD1-209ENST00000436461 MX1P20591 662 aa20.56■□□□□ 0.88
CALD1-209ENST00000436461 SCARF1Q14162 830 aa20.56■□□□□ 0.88
CALD1-209ENST00000436461 TTC39AQ5SRH9 613 aa20.56■□□□□ 0.88
CALD1-209ENST00000436461 ZNF804AQ7Z570 1209 aa20.56■□□□□ 0.88
CALD1-209ENST00000436461 KCNQ5Q9NR82 932 aa20.56■□□□□ 0.88
CALD1-209ENST00000436461 NDUFB9Q9Y6M9 179 aa20.56■□□□□ 0.88
CALD1-209ENST00000436461 DICER1Q9UPY3 1922 aaKnown RBP20.56■□□□□ 0.88
CALD1-209ENST00000436461 AKAP11Q9UKA4 1901 aa20.56■□□□□ 0.88
CALD1-209ENST00000436461 COL1A1P02452 1464 aaPredicted RBP20.56■□□□□ 0.88
CALD1-209ENST00000436461 G3V3G9 751 aa20.56■□□□□ 0.88
CALD1-209ENST00000436461 ECE2O60344 883 aa20.56■□□□□ 0.88
CALD1-209ENST00000436461 GRIN3BO60391 1043 aa20.56■□□□□ 0.88
CALD1-209ENST00000436461 CCDC158Q5M9N0 1113 aa20.56■□□□□ 0.88
CALD1-209ENST00000436461 DCAF8Q5TAQ9 597 aa20.56■□□□□ 0.88
CALD1-209ENST00000436461 PI16Q6UXB8 463 aa20.56■□□□□ 0.88
CALD1-209ENST00000436461 RGS3P49796 1198 aa20.55■□□□□ 0.88
CALD1-209ENST00000436461 PLEKHM2Q8IWE5 1019 aa20.55■□□□□ 0.88
CALD1-209ENST00000436461 YDJCA8MPS7 323 aa20.54■□□□□ 0.88
CALD1-209ENST00000436461 LMNB1P20700 586 aa20.54■□□□□ 0.88
CALD1-209ENST00000436461 PDE1AP54750 535 aa20.54■□□□□ 0.88
CALD1-209ENST00000436461 TIAM2Q8IVF5 1701 aa20.54■□□□□ 0.88
CALD1-209ENST00000436461 COA1Q9GZY4 146 aa20.54■□□□□ 0.88
CALD1-209ENST00000436461 SNRKQ9NRH2 765 aa20.54■□□□□ 0.88
CALD1-209ENST00000436461 FRAT2O75474 233 aaPredicted RBP20.53■□□□□ 0.88
CALD1-209ENST00000436461 MCAMP43121 646 aa20.53■□□□□ 0.88
CALD1-209ENST00000436461 RASGRF1Q13972 1273 aa20.53■□□□□ 0.88
CALD1-209ENST00000436461 NIM1KQ8IY84 436 aa20.53■□□□□ 0.88
CALD1-209ENST00000436461 BOLA2Q9H3K6 86 aa20.53■□□□□ 0.88
CALD1-209ENST00000436461 ECHDC1Q9NTX5 307 aa20.53■□□□□ 0.88
CALD1-209ENST00000436461 RNF181Q9P0P0 153 aa20.53■□□□□ 0.88
CALD1-209ENST00000436461 IL1R1P14778 569 aa20.53■□□□□ 0.88
CALD1-209ENST00000436461 ARID4AP29374 1257 aaPredicted RBP20.53■□□□□ 0.88
CALD1-209ENST00000436461 CHAF1AQ13111 956 aaPredicted RBP20.53■□□□□ 0.88
CALD1-209ENST00000436461 TDRD7Q8NHU6 1098 aaKnown RBP20.53■□□□□ 0.88
CALD1-209ENST00000436461 FBXW7Q969H0 707 aa20.53■□□□□ 0.88
CALD1-209ENST00000436461 ZNF646O15015 1829 aaPredicted RBP20.52■□□□□ 0.88
CALD1-209ENST00000436461 MYO5AQ9Y4I1 1855 aaKnown RBP20.52■□□□□ 0.88
CALD1-209ENST00000436461 C9orf131Q5VYM1 1079 aa20.52■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms