RNA–Protein interactions for RNA: ENST00000435437.2

RPE-207, Transcript of ribulose-5-phosphate-3-epimerase, humanhuman

TSL 2 BASIC

Gene RPE, Length 858 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPE-207ENST00000435437 THSD7BQ9C0I4 1608 aa11.19□□□□□ -0.62
RPE-207ENST00000435437 ZNF804BA4D1E1 1349 aa11.18□□□□□ -0.62
RPE-207ENST00000435437 ANKRD18BA2A2Z9 1011 aa11.18□□□□□ -0.62
RPE-207ENST00000435437 LRRC24Q50LG9 513 aa11.18□□□□□ -0.62
RPE-207ENST00000435437 DACT2Q5SW24 774 aa11.18□□□□□ -0.62
RPE-207ENST00000435437 C15orf52Q6ZUT6 534 aaKnown RBP11.18□□□□□ -0.62
RPE-207ENST00000435437 PNMA8AQ86V59 439 aaPredicted RBP11.18□□□□□ -0.62
RPE-207ENST00000435437 KLHDC4Q8TBB5 520 aa11.18□□□□□ -0.62
RPE-207ENST00000435437 EYA3Q99504 573 aa11.18□□□□□ -0.62
RPE-207ENST00000435437 GLIS2Q9BZE0 524 aaPredicted RBP11.18□□□□□ -0.62
RPE-207ENST00000435437 ZC3H12CQ9C0D7 883 aaKnown RBP11.18□□□□□ -0.62
RPE-207ENST00000435437 RIPOR2Q9Y4F9 1068 aa11.18□□□□□ -0.62
RPE-207ENST00000435437 CT47B1P0C2W7 299 aaPredicted RBP11.17□□□□□ -0.62
RPE-207ENST00000435437 IGHMBP2P38935 993 aaKnown RBP11.17□□□□□ -0.62
RPE-207ENST00000435437 ZNF280AP59817 542 aaPredicted RBP11.17□□□□□ -0.62
RPE-207ENST00000435437 TNIP1Q15025 636 aa11.17□□□□□ -0.62
RPE-207ENST00000435437 RSBN1LQ6PCB5 846 aaPredicted RBP11.17□□□□□ -0.62
RPE-207ENST00000435437 CERS5Q8N5B7 392 aa11.17□□□□□ -0.62
RPE-207ENST00000435437 VGLL2Q8N8G2 317 aa11.17□□□□□ -0.62
RPE-207ENST00000435437 TMX4Q9H1E5 349 aaPredicted RBP11.17□□□□□ -0.62
RPE-207ENST00000435437 CREBZFQ9NS37 354 aa11.17□□□□□ -0.62
RPE-207ENST00000435437 C9orf78Q9NZ63 289 aaPredicted RBP11.17□□□□□ -0.62
RPE-207ENST00000435437 LEMD3Q9Y2U8 911 aa11.17□□□□□ -0.62
RPE-207ENST00000435437 ARAP2Q8WZ64 1704 aa11.17□□□□□ -0.62
RPE-207ENST00000435437 CNTNAP1P78357 1384 aa11.16□□□□□ -0.62
RPE-207ENST00000435437 AOX1Q06278 1338 aa11.16□□□□□ -0.62
RPE-207ENST00000435437 LMOD1P29536 600 aaPredicted RBP11.16□□□□□ -0.62
RPE-207ENST00000435437 HNRNPUQ00839 825 aaKnown RBP eCLIP11.16□□□□□ -0.62
RPE-207ENST00000435437 IFIT5Q13325 482 aaKnown RBP11.16□□□□□ -0.62
RPE-207ENST00000435437 TBC1D10BQ4KMP7 808 aaPredicted RBP11.16□□□□□ -0.62
RPE-207ENST00000435437 MEIS3Q99687 375 aa11.16□□□□□ -0.62
RPE-207ENST00000435437 CLEC11AQ9Y240 323 aa11.16□□□□□ -0.62
RPE-207ENST00000435437 PCDHAC2Q9Y5I4 1007 aa11.16□□□□□ -0.62
RPE-207ENST00000435437 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.16□□□□□ -0.62
RPE-207ENST00000435437 NPM3O75607 178 aaKnown RBP11.15□□□□□ -0.62
RPE-207ENST00000435437 TRIM27P14373 513 aa11.15□□□□□ -0.62
RPE-207ENST00000435437 PODNQ7Z5L7 613 aa11.15□□□□□ -0.62
RPE-207ENST00000435437 ZBED3Q96IU2 234 aaPredicted RBP11.15□□□□□ -0.62
RPE-207ENST00000435437 CD209Q9NNX6 404 aa11.15□□□□□ -0.62
RPE-207ENST00000435437 MKRN1Q9UHC7 482 aaKnown RBP11.15□□□□□ -0.62
RPE-207ENST00000435437 SCAF8Q9UPN6 1271 aaKnown RBP11.15□□□□□ -0.62
RPE-207ENST00000435437 CHMP3Q9Y3E7 222 aa11.15□□□□□ -0.62
RPE-207ENST00000435437 PCNTO95613 3336 aa11.14□□□□□ -0.63
RPE-207ENST00000435437 ECM29Q5VYK3 1845 aa11.14□□□□□ -0.63
RPE-207ENST00000435437 USP17L3A6NCW0 530 aa11.14□□□□□ -0.63
RPE-207ENST00000435437 USP17L4A6NCW7 530 aa11.14□□□□□ -0.63
RPE-207ENST00000435437 ADM5C9JUS6 153 aa11.14□□□□□ -0.63
RPE-207ENST00000435437 RPS12P25398 132 aaKnown RBP11.14□□□□□ -0.63
RPE-207ENST00000435437 PTPN12Q05209 780 aaKnown RBP11.14□□□□□ -0.63
RPE-207ENST00000435437 GRIK5Q16478 980 aa11.14□□□□□ -0.63
RPE-207ENST00000435437 INTS3Q68E01 1043 aaKnown RBP11.14□□□□□ -0.63
RPE-207ENST00000435437 LDHAL6AQ6ZMR3 332 aa11.14□□□□□ -0.63
RPE-207ENST00000435437 USP17L1Q7RTZ2 530 aa11.14□□□□□ -0.63
RPE-207ENST00000435437 ATG9AQ7Z3C6 839 aa11.14□□□□□ -0.63
RPE-207ENST00000435437 MPHOSPH8Q99549 860 aa11.14□□□□□ -0.63
RPE-207ENST00000435437 COA1Q9GZY4 146 aa11.14□□□□□ -0.63
RPE-207ENST00000435437 COL1A1P02452 1464 aaPredicted RBP11.13□□□□□ -0.63
RPE-207ENST00000435437 ZBED9Q6R2W3 1325 aa11.13□□□□□ -0.63
RPE-207ENST00000435437 RASSF10A6NK89 507 aa11.13□□□□□ -0.63
RPE-207ENST00000435437 TMEM88BA6NKF7 163 aa11.13□□□□□ -0.63
RPE-207ENST00000435437 IL1R1P14778 569 aa11.13□□□□□ -0.63
RPE-207ENST00000435437 FGFR2P21802 821 aa11.13□□□□□ -0.63
RPE-207ENST00000435437 VEGFBP49765 207 aa11.13□□□□□ -0.63
RPE-207ENST00000435437 CCDC57Q2TAC2 916 aa11.13□□□□□ -0.63
RPE-207ENST00000435437 KIF4BQ2VIQ3 1234 aa11.13□□□□□ -0.63
RPE-207ENST00000435437 RBM26Q5T8P6 1007 aaKnown RBP11.13□□□□□ -0.63
RPE-207ENST00000435437 AGBL3Q8NEM8 1001 aa11.13□□□□□ -0.63
RPE-207ENST00000435437 ARHGAP45Q92619 1136 aa11.13□□□□□ -0.63
RPE-207ENST00000435437 FAM84BQ96KN1 310 aaPredicted RBP11.13□□□□□ -0.63
RPE-207ENST00000435437 ANKRD2Q9GZV1 360 aa11.13□□□□□ -0.63
RPE-207ENST00000435437 PLIN1O60240 522 aa11.12□□□□□ -0.63
RPE-207ENST00000435437 RLBP1P12271 317 aa11.12□□□□□ -0.63
RPE-207ENST00000435437 GYG1P46976 350 aa11.12□□□□□ -0.63
RPE-207ENST00000435437 GTF2IP78347 998 aa11.12□□□□□ -0.63
RPE-207ENST00000435437 NBPF9Q3BBW0 867 aa11.12□□□□□ -0.63
RPE-207ENST00000435437 STRIP1Q5VSL9 837 aa11.12□□□□□ -0.63
RPE-207ENST00000435437 USP48Q86UV5 1035 aa11.12□□□□□ -0.63
RPE-207ENST00000435437 TDRD7Q8NHU6 1098 aaKnown RBP11.12□□□□□ -0.63
RPE-207ENST00000435437 ZC3H15Q8WU90 426 aaKnown RBP11.12□□□□□ -0.63
RPE-207ENST00000435437 JAG2Q9Y219 1238 aa11.12□□□□□ -0.63
RPE-207ENST00000435437 LRRFIP2Q9Y608 721 aaKnown RBP11.12□□□□□ -0.63
RPE-207ENST00000435437 H7C1D1 291 aa11.11□□□□□ -0.63
RPE-207ENST00000435437 FBXO33Q7Z6M2 555 aa11.11□□□□□ -0.63
RPE-207ENST00000435437 ZIC5Q96T25 663 aa11.11□□□□□ -0.63
RPE-207ENST00000435437 API5Q9BZZ5 524 aaKnown RBP11.11□□□□□ -0.63
RPE-207ENST00000435437 MYOZ2Q9NPC6 264 aa11.11□□□□□ -0.63
RPE-207ENST00000435437 GGA3Q9NZ52 723 aa11.11□□□□□ -0.63
RPE-207ENST00000435437 PA2G4Q9UQ80 394 aaKnown RBP11.11□□□□□ -0.63
RPE-207ENST00000435437 TLL2Q9Y6L7 1015 aa11.11□□□□□ -0.63
RPE-207ENST00000435437 WNT10BO00744 389 aa11.1□□□□□ -0.63
RPE-207ENST00000435437 USP17L8P0C7I0 530 aa11.1□□□□□ -0.63
RPE-207ENST00000435437 UBE4AQ14139 1066 aa11.1□□□□□ -0.63
RPE-207ENST00000435437 SCARF1Q14162 830 aa11.1□□□□□ -0.63
RPE-207ENST00000435437 TTLL5Q6EMB2 1281 aa11.1□□□□□ -0.63
RPE-207ENST00000435437 ATF7IPQ6VMQ6 1270 aa11.1□□□□□ -0.63
RPE-207ENST00000435437 SAPCD2Q86UD0 394 aa11.1□□□□□ -0.63
RPE-207ENST00000435437 TMEM57Q8N5G2 664 aa11.1□□□□□ -0.63
RPE-207ENST00000435437 CNNM1Q9NRU3 951 aa11.1□□□□□ -0.63
RPE-207ENST00000435437 PAPPA2Q9BXP8 1791 aa11.1□□□□□ -0.63
RPE-207ENST00000435437 FAM205AQ6ZU69 1335 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms