RNA–Protein interactions for RNA: ENST00000434376.6

SCARF1-203, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 3,342 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-203ENST00000434376 PIBF1Q8WXW3 757 aa18.36■□□□□ 0.53
SCARF1-203ENST00000434376 ZSCAN31Q96LW9 406 aaPredicted RBP18.36■□□□□ 0.53
SCARF1-203ENST00000434376 MPHOSPH8Q99549 860 aa18.36■□□□□ 0.53
SCARF1-203ENST00000434376 ATP6V1DQ9Y5K8 247 aa18.36■□□□□ 0.53
SCARF1-203ENST00000434376 UTYO14607 1347 aa18.36■□□□□ 0.53
SCARF1-203ENST00000434376 CBX1P83916 185 aa18.36■□□□□ 0.53
SCARF1-203ENST00000434376 SH2B1Q9NRF2 756 aaPredicted RBP18.36■□□□□ 0.53
SCARF1-203ENST00000434376 CPLX1O14810 134 aa18.35■□□□□ 0.53
SCARF1-203ENST00000434376 RABL6Q3YEC7 729 aaPredicted RBP18.35■□□□□ 0.53
SCARF1-203ENST00000434376 RALYLQ86SE5 291 aaKnown RBP18.35■□□□□ 0.53
SCARF1-203ENST00000434376 EP400Q96L91 3159 aa18.35■□□□□ 0.53
SCARF1-203ENST00000434376 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.35■□□□□ 0.53
SCARF1-203ENST00000434376 E7EWF7 191 aa18.34■□□□□ 0.53
SCARF1-203ENST00000434376 FAM98CQ17RN3 349 aaKnown RBP18.34■□□□□ 0.53
SCARF1-203ENST00000434376 CMTR1Q8N1G2 835 aaKnown RBP18.34■□□□□ 0.53
SCARF1-203ENST00000434376 U3KPZ7 1027 aaPredicted RBP18.34■□□□□ 0.53
SCARF1-203ENST00000434376 RNF113AO15541 343 aaKnown RBP18.34■□□□□ 0.53
SCARF1-203ENST00000434376 MICU3Q86XE3 530 aa18.34■□□□□ 0.53
SCARF1-203ENST00000434376 ANKRD18BA2A2Z9 1011 aa18.34■□□□□ 0.53
SCARF1-203ENST00000434376 DDB1Q16531 1140 aa18.34■□□□□ 0.53
SCARF1-203ENST00000434376 SASS6Q6UVJ0 657 aa18.34■□□□□ 0.53
SCARF1-203ENST00000434376 PTPDC1A2A3K4 754 aa18.33■□□□□ 0.53
SCARF1-203ENST00000434376 NFXL1Q6ZNB6 911 aa18.33■□□□□ 0.53
SCARF1-203ENST00000434376 PTF1AQ7RTS3 328 aa18.33■□□□□ 0.53
SCARF1-203ENST00000434376 C8orf37Q96NL8 207 aa18.33■□□□□ 0.53
SCARF1-203ENST00000434376 AIFM3Q96NN9 605 aa18.33■□□□□ 0.53
SCARF1-203ENST00000434376 NIP7Q9Y221 180 aaKnown RBP eCLIP18.33■□□□□ 0.53
SCARF1-203ENST00000434376 USP42Q9H9J4 1324 aaKnown RBP18.33■□□□□ 0.53
SCARF1-203ENST00000434376 FGAP02671 866 aa18.33■□□□□ 0.52
SCARF1-203ENST00000434376 UBE2HP62256 183 aa18.33■□□□□ 0.52
SCARF1-203ENST00000434376 NLRP10Q86W26 655 aa18.33■□□□□ 0.52
SCARF1-203ENST00000434376 LUZP1Q86V48 1076 aa18.33■□□□□ 0.52
SCARF1-203ENST00000434376 KLF18A0A0U1RQI7 1052 aa18.32■□□□□ 0.52
SCARF1-203ENST00000434376 GOLGA8BA8MQT2 603 aa18.32■□□□□ 0.52
SCARF1-203ENST00000434376 ME1P48163 572 aa18.32■□□□□ 0.52
SCARF1-203ENST00000434376 CCDC183Q5T5S1 534 aa18.32■□□□□ 0.52
SCARF1-203ENST00000434376 CLEC17AQ6ZS10 378 aa18.32■□□□□ 0.52
SCARF1-203ENST00000434376 MAP7D2Q96T17 732 aa18.32■□□□□ 0.52
SCARF1-203ENST00000434376 GPAA1O43292 621 aa18.32■□□□□ 0.52
SCARF1-203ENST00000434376 ZNF500O60304 480 aaPredicted RBP18.32■□□□□ 0.52
SCARF1-203ENST00000434376 ADCY5O95622 1261 aa18.32■□□□□ 0.52
SCARF1-203ENST00000434376 MCAMP43121 646 aa18.32■□□□□ 0.52
SCARF1-203ENST00000434376 SF3A1Q15459 793 aaKnown RBP18.32■□□□□ 0.52
SCARF1-203ENST00000434376 UBE2Q2LH0YL09 131 aa18.31■□□□□ 0.52
SCARF1-203ENST00000434376 GNL2Q13823 731 aaKnown RBP18.31■□□□□ 0.52
SCARF1-203ENST00000434376 TTLL11Q8NHH1 800 aa18.31■□□□□ 0.52
SCARF1-203ENST00000434376 TNMDQ9H2S6 317 aa18.31■□□□□ 0.52
SCARF1-203ENST00000434376 LRRC37A3O60309 1634 aa18.31■□□□□ 0.52
SCARF1-203ENST00000434376 IGSF3O75054 1194 aa18.31■□□□□ 0.52
SCARF1-203ENST00000434376 PHF14O94880 888 aa18.31■□□□□ 0.52
SCARF1-203ENST00000434376 WWC3Q9ULE0 1092 aa18.31■□□□□ 0.52
SCARF1-203ENST00000434376 SOS2Q07890 1332 aaPredicted RBP18.31■□□□□ 0.52
SCARF1-203ENST00000434376 BCAMP50895 628 aa18.31■□□□□ 0.52
SCARF1-203ENST00000434376 ANKRD1Q15327 319 aa18.31■□□□□ 0.52
SCARF1-203ENST00000434376 NKX2-3Q8TAU0 364 aa18.31■□□□□ 0.52
SCARF1-203ENST00000434376 DHX32Q7L7V1 743 aaKnown RBP18.3■□□□□ 0.52
SCARF1-203ENST00000434376 SLIT3O75094 1523 aa18.3■□□□□ 0.52
SCARF1-203ENST00000434376 SPDYE4A6NLX3 237 aa18.3■□□□□ 0.52
SCARF1-203ENST00000434376 MINDY4BA8MYZ0 360 aa18.3■□□□□ 0.52
SCARF1-203ENST00000434376 B4E1Z4 1266 aa18.3■□□□□ 0.52
SCARF1-203ENST00000434376 BIN1O00499 593 aa18.3■□□□□ 0.52
SCARF1-203ENST00000434376 NR1I2O75469 434 aa18.3■□□□□ 0.52
SCARF1-203ENST00000434376 GIGYF2Q6Y7W6 1299 aaKnown RBP18.3■□□□□ 0.52
SCARF1-203ENST00000434376 PHKBQ93100 1093 aa18.3■□□□□ 0.52
SCARF1-203ENST00000434376 hCG_1642624A0A1W2PR95 340 aa18.29■□□□□ 0.52
SCARF1-203ENST00000434376 SMIM22K7EJ46 135 aa18.29■□□□□ 0.52
SCARF1-203ENST00000434376 CTDSPL2Q05D32 466 aa18.29■□□□□ 0.52
SCARF1-203ENST00000434376 PDLIM2Q96JY6 352 aa18.29■□□□□ 0.52
SCARF1-203ENST00000434376 NUP62CLQ9H1M0 184 aa18.29■□□□□ 0.52
SCARF1-203ENST00000434376 DYNC1I1O14576 645 aa18.29■□□□□ 0.52
SCARF1-203ENST00000434376 ZNF213O14771 459 aa18.29■□□□□ 0.52
SCARF1-203ENST00000434376 PRC1O43663 620 aa18.29■□□□□ 0.52
SCARF1-203ENST00000434376 PRKAB2O43741 272 aa18.29■□□□□ 0.52
SCARF1-203ENST00000434376 ZBTB38Q8NAP3 1195 aaPredicted RBP18.29■□□□□ 0.52
SCARF1-203ENST00000434376 TM6SF1Q9BZW5 370 aa18.29■□□□□ 0.52
SCARF1-203ENST00000434376 SENP2Q9HC62 589 aa18.29■□□□□ 0.52
SCARF1-203ENST00000434376 IMMTQ16891 758 aaKnown RBP18.29■□□□□ 0.52
SCARF1-203ENST00000434376 SUSD4Q5VX71 490 aa18.29■□□□□ 0.52
SCARF1-203ENST00000434376 MAGEB6Q8N7X4 407 aa18.29■□□□□ 0.52
SCARF1-203ENST00000434376 GTF3C6Q969F1 213 aa18.29■□□□□ 0.52
SCARF1-203ENST00000434376 AIDAQ96BJ3 306 aa18.29■□□□□ 0.52
SCARF1-203ENST00000434376 ARMT1Q9H993 441 aa18.29■□□□□ 0.52
SCARF1-203ENST00000434376 PIH1D3Q9NQM4 214 aaKnown RBP18.29■□□□□ 0.52
SCARF1-203ENST00000434376 OVOS2A0A0G2JMS6 1433 aa18.29■□□□□ 0.52
SCARF1-203ENST00000434376 MAP3K15Q6ZN16 1313 aa18.28■□□□□ 0.52
SCARF1-203ENST00000434376 PDCP20941 246 aa18.28■□□□□ 0.52
SCARF1-203ENST00000434376 KRT32Q14532 448 aa18.28■□□□□ 0.52
SCARF1-203ENST00000434376 SLC51AQ86UW1 340 aa18.28■□□□□ 0.52
SCARF1-203ENST00000434376 MED23Q9ULK4 1368 aa18.28■□□□□ 0.52
SCARF1-203ENST00000434376 ADD1P35611 737 aaKnown RBP18.28■□□□□ 0.52
SCARF1-203ENST00000434376 TRDNQ13061 729 aa18.28■□□□□ 0.52
SCARF1-203ENST00000434376 HS1BP3Q53T59 392 aa18.28■□□□□ 0.52
SCARF1-203ENST00000434376 CYP19A1P11511 503 aaPredicted RBP18.28■□□□□ 0.52
SCARF1-203ENST00000434376 CTSWP56202 376 aa18.28■□□□□ 0.52
SCARF1-203ENST00000434376 VPS37DQ86XT2 251 aa18.28■□□□□ 0.52
SCARF1-203ENST00000434376 NUP133Q8WUM0 1156 aa18.28■□□□□ 0.52
SCARF1-203ENST00000434376 NGLY1Q96IV0 654 aa18.28■□□□□ 0.52
SCARF1-203ENST00000434376 ISCA1Q9BUE6 129 aa18.28■□□□□ 0.52
SCARF1-203ENST00000434376 DNAJC25Q9H1X3 360 aa18.28■□□□□ 0.52
SCARF1-203ENST00000434376 LRP2BPQ9P2M1 347 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms