RNA–Protein interactions for RNA: ENST00000433709.6

HDAC9-213, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 602 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-213ENST00000433709 ALKBH8Q96BT7 664 aaKnown RBP9.58□□□□□ -0.88
HDAC9-213ENST00000433709 SCARF2Q96GP6 870 aaPredicted RBP9.58□□□□□ -0.88
HDAC9-213ENST00000433709 RASSF4Q9H2L5 321 aa9.58□□□□□ -0.88
HDAC9-213ENST00000433709 PRDM6Q9NQX0 595 aa9.58□□□□□ -0.88
HDAC9-213ENST00000433709 AMOTL2Q9Y2J4 779 aa9.58□□□□□ -0.88
HDAC9-213ENST00000433709 IFT140Q96RY7 1462 aa9.58□□□□□ -0.88
HDAC9-213ENST00000433709 URB2Q14146 1524 aaKnown RBP9.57□□□□□ -0.88
HDAC9-213ENST00000433709 EIF1AYO14602 144 aaKnown RBP9.57□□□□□ -0.88
HDAC9-213ENST00000433709 TRPA1O75762 1119 aa9.57□□□□□ -0.88
HDAC9-213ENST00000433709 NEFLP07196 543 aa9.57□□□□□ -0.88
HDAC9-213ENST00000433709 TRIM11Q96F44 468 aa9.57□□□□□ -0.88
HDAC9-213ENST00000433709 SUV39H2Q9H5I1 410 aa9.57□□□□□ -0.88
HDAC9-213ENST00000433709 LATS2Q9NRM7 1088 aa9.57□□□□□ -0.88
HDAC9-213ENST00000433709 CPNE3O75131 537 aaKnown RBP9.56□□□□□ -0.88
HDAC9-213ENST00000433709 NID1P14543 1247 aa9.56□□□□□ -0.88
HDAC9-213ENST00000433709 TTC9Q92623 222 aa9.56□□□□□ -0.88
HDAC9-213ENST00000433709 CSRNP1Q96S65 589 aa9.56□□□□□ -0.88
HDAC9-213ENST00000433709 PBX4Q9BYU1 374 aa9.56□□□□□ -0.88
HDAC9-213ENST00000433709 TRIM33Q9UPN9 1127 aa9.56□□□□□ -0.88
HDAC9-213ENST00000433709 GNB5O14775 395 aa9.55□□□□□ -0.88
HDAC9-213ENST00000433709 EDN3P14138 238 aa9.55□□□□□ -0.88
HDAC9-213ENST00000433709 IRS1P35568 1242 aa9.55□□□□□ -0.88
HDAC9-213ENST00000433709 CEP135Q66GS9 1140 aa9.55□□□□□ -0.88
HDAC9-213ENST00000433709 GDF6Q6KF10 455 aaPredicted RBP9.55□□□□□ -0.88
HDAC9-213ENST00000433709 HHIPQ96QV1 700 aa9.55□□□□□ -0.88
HDAC9-213ENST00000433709 PLVAPQ9BX97 442 aa9.55□□□□□ -0.88
HDAC9-213ENST00000433709 DZANK1Q9NVP4 752 aa9.55□□□□□ -0.88
HDAC9-213ENST00000433709 CCDC27Q2M243 656 aa9.54□□□□□ -0.88
HDAC9-213ENST00000433709 PEAR1Q5VY43 1037 aaPredicted RBP9.54□□□□□ -0.88
HDAC9-213ENST00000433709 ADAMTSL4Q6UY14 1074 aa9.54□□□□□ -0.88
HDAC9-213ENST00000433709 GALNT12Q8IXK2 581 aa9.54□□□□□ -0.88
HDAC9-213ENST00000433709 OSMRQ99650 979 aa9.54□□□□□ -0.88
HDAC9-213ENST00000433709 ZKSCAN3Q9BRR0 538 aa9.54□□□□□ -0.88
HDAC9-213ENST00000433709 DNAJC25Q9H1X3 360 aa9.54□□□□□ -0.88
HDAC9-213ENST00000433709 TOPBP1Q92547 1522 aa9.53□□□□□ -0.88
HDAC9-213ENST00000433709 ANKRD33BA6NCL7 494 aa9.53□□□□□ -0.88
HDAC9-213ENST00000433709 NFKBIEO00221 500 aa9.53□□□□□ -0.88
HDAC9-213ENST00000433709 DNAJC14Q6Y2X3 702 aaPredicted RBP9.53□□□□□ -0.88
HDAC9-213ENST00000433709 CCDC74AQ96AQ1 378 aa9.53□□□□□ -0.88
HDAC9-213ENST00000433709 POP1Q99575 1024 aaKnown RBP9.53□□□□□ -0.88
HDAC9-213ENST00000433709 LACRTQ9GZZ8 138 aa9.53□□□□□ -0.88
HDAC9-213ENST00000433709 PNMA6FA0A0J9YX94 578 aa9.52□□□□□ -0.89
HDAC9-213ENST00000433709 SMNDC1O75940 238 aaKnown RBP eCLIP9.52□□□□□ -0.89
HDAC9-213ENST00000433709 MAPK8P45983 427 aa9.52□□□□□ -0.89
HDAC9-213ENST00000433709 BAG6P46379 1132 aa9.52□□□□□ -0.89
HDAC9-213ENST00000433709 FMR1Q06787 632 aaKnown RBP eCLIP9.52□□□□□ -0.89
HDAC9-213ENST00000433709 DNMBPQ6XZF7 1577 aa9.52□□□□□ -0.89
HDAC9-213ENST00000433709 DMRTC2Q8IXT2 367 aaPredicted RBP9.52□□□□□ -0.89
HDAC9-213ENST00000433709 A0A1W2PP55 124 aa9.51□□□□□ -0.89
HDAC9-213ENST00000433709 PDE2AO00408 941 aaPredicted RBP9.51□□□□□ -0.89
HDAC9-213ENST00000433709 P4HBP07237 508 aaKnown RBP9.51□□□□□ -0.89
HDAC9-213ENST00000433709 COL8A1P27658 744 aa9.51□□□□□ -0.89
HDAC9-213ENST00000433709 ENOX2Q16206 610 aaKnown RBP9.51□□□□□ -0.89
HDAC9-213ENST00000433709 TRAPPC3LQ5T215 181 aa9.51□□□□□ -0.89
HDAC9-213ENST00000433709 MSL1Q68DK7 614 aa9.51□□□□□ -0.89
HDAC9-213ENST00000433709 WFDC8Q8IUA0 241 aa9.51□□□□□ -0.89
HDAC9-213ENST00000433709 IL22RA1Q8N6P7 574 aa9.51□□□□□ -0.89
HDAC9-213ENST00000433709 SETDB2Q96T68 719 aa9.51□□□□□ -0.89
HDAC9-213ENST00000433709 NPHS2Q9NP85 383 aa9.51□□□□□ -0.89
HDAC9-213ENST00000433709 PIK3R2O00459 728 aa9.5□□□□□ -0.89
HDAC9-213ENST00000433709 ILDR2Q71H61 639 aa9.5□□□□□ -0.89
HDAC9-213ENST00000433709 EPS8L3Q8TE67 593 aaKnown RBP9.5□□□□□ -0.89
HDAC9-213ENST00000433709 NXPE3Q969Y0 559 aa9.5□□□□□ -0.89
HDAC9-213ENST00000433709 WWC3Q9ULE0 1092 aa9.5□□□□□ -0.89
HDAC9-213ENST00000433709 FAM229AH3BQW9 127 aa9.49□□□□□ -0.89
HDAC9-213ENST00000433709 GSK3AP49840 483 aa9.49□□□□□ -0.89
HDAC9-213ENST00000433709 TMCO4Q5TGY1 634 aa9.49□□□□□ -0.89
HDAC9-213ENST00000433709 TMEM102Q8N9M5 508 aaPredicted RBP9.49□□□□□ -0.89
HDAC9-213ENST00000433709 SH2B1Q9NRF2 756 aaPredicted RBP9.49□□□□□ -0.89
HDAC9-213ENST00000433709 RNF225M0QZC1 329 aaPredicted RBP9.48□□□□□ -0.89
HDAC9-213ENST00000433709 PI16Q6UXB8 463 aa9.48□□□□□ -0.89
HDAC9-213ENST00000433709 NOP53Q9NZM5 478 aaKnown RBP9.48□□□□□ -0.89
HDAC9-213ENST00000433709 PTPRAP18433 802 aa9.47□□□□□ -0.89
HDAC9-213ENST00000433709 CDC27P30260 824 aa9.47□□□□□ -0.89
HDAC9-213ENST00000433709 CDC25BP30305 580 aa9.47□□□□□ -0.89
HDAC9-213ENST00000433709 KCNMA1Q12791 1236 aa9.47□□□□□ -0.89
HDAC9-213ENST00000433709 A0A0A0MRY4 1105 aa9.46□□□□□ -0.9
HDAC9-213ENST00000433709 METTL12A8MUP2 240 aa9.46□□□□□ -0.9
HDAC9-213ENST00000433709 RASSF7Q02833 373 aa9.46□□□□□ -0.9
HDAC9-213ENST00000433709 KIAA0319Q5VV43 1072 aa9.46□□□□□ -0.9
HDAC9-213ENST00000433709 NPAS4Q8IUM7 802 aa9.46□□□□□ -0.9
HDAC9-213ENST00000433709 ASAP3Q8TDY4 903 aa9.46□□□□□ -0.9
HDAC9-213ENST00000433709 TCF12Q99081 682 aa9.46□□□□□ -0.9
HDAC9-213ENST00000433709 ADAM19Q9H013 955 aa9.46□□□□□ -0.9
HDAC9-213ENST00000433709 LIN7BQ9HAP6 207 aa9.46□□□□□ -0.9
HDAC9-213ENST00000433709 WDR97A6NE52 1622 aa9.45□□□□□ -0.9
HDAC9-213ENST00000433709 SPDYE3A6NKU9 549 aa9.45□□□□□ -0.9
HDAC9-213ENST00000433709 GADD45BO75293 160 aaPredicted RBP9.45□□□□□ -0.9
HDAC9-213ENST00000433709 EPHA1P21709 976 aa9.45□□□□□ -0.9
HDAC9-213ENST00000433709 TRIM28Q13263 835 aaKnown RBP9.45□□□□□ -0.9
HDAC9-213ENST00000433709 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.45□□□□□ -0.9
HDAC9-213ENST00000433709 TXNDC11Q6PKC3 985 aa9.45□□□□□ -0.9
HDAC9-213ENST00000433709 BHLHE41Q9C0J9 482 aaPredicted RBP9.45□□□□□ -0.9
HDAC9-213ENST00000433709 EHD4Q9H223 541 aa9.45□□□□□ -0.9
HDAC9-213ENST00000433709 PPME1Q9Y570 386 aa9.45□□□□□ -0.9
HDAC9-213ENST00000433709 SOGA1O94964 1423 aa9.45□□□□□ -0.9
HDAC9-213ENST00000433709 LINC01387J3KSC0 135 aa9.44□□□□□ -0.9
HDAC9-213ENST00000433709 LDHBP07195 334 aaKnown RBP9.44□□□□□ -0.9
HDAC9-213ENST00000433709 CCNJLQ8IV13 435 aa9.44□□□□□ -0.9
HDAC9-213ENST00000433709 CACTIN-AS1Q8N1I8 211 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms