RNA–Protein interactions for RNA: ENST00000432340.1

NUP50-209, Transcript of nucleoporin 50, humanhuman

TSL 5

Gene NUP50, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-209ENST00000432340 BABAM1Q9NWV8 329 aa20.66■□□□□ 0.9
NUP50-209ENST00000432340 MKI67P46013 3256 aaKnown RBP20.66■□□□□ 0.9
NUP50-209ENST00000432340 IRS4O14654 1257 aaPredicted RBP20.65■□□□□ 0.9
NUP50-209ENST00000432340 PROSER3Q2NL68 480 aa20.65■□□□□ 0.9
NUP50-209ENST00000432340 PNNQ9H307 717 aaKnown RBP20.65■□□□□ 0.9
NUP50-209ENST00000432340 PPP2R3BQ9Y5P8 575 aa20.65■□□□□ 0.9
NUP50-209ENST00000432340 CUL9Q8IWT3 2517 aa20.64■□□□□ 0.9
NUP50-209ENST00000432340 COL1A1P02452 1464 aaPredicted RBP20.64■□□□□ 0.89
NUP50-209ENST00000432340 SUPT20HL1Q3ZLR7 823 aa20.64■□□□□ 0.89
NUP50-209ENST00000432340 ANKRD13DQ6ZTN6 518 aa20.64■□□□□ 0.89
NUP50-209ENST00000432340 PLBD2Q8NHP8 589 aa20.64■□□□□ 0.89
NUP50-209ENST00000432340 ANXA1P04083 346 aa20.63■□□□□ 0.89
NUP50-209ENST00000432340 IREB2P48200 963 aaKnown RBP20.63■□□□□ 0.89
NUP50-209ENST00000432340 KIF22Q14807 665 aa20.63■□□□□ 0.89
NUP50-209ENST00000432340 CCDC152Q4G0S7 254 aa20.63■□□□□ 0.89
NUP50-209ENST00000432340 STRIP1Q5VSL9 837 aa20.63■□□□□ 0.89
NUP50-209ENST00000432340 PTCH2Q9Y6C5 1203 aa20.63■□□□□ 0.89
NUP50-209ENST00000432340 GNRH1P01148 92 aa20.62■□□□□ 0.89
NUP50-209ENST00000432340 NFE2L2Q16236 605 aa20.62■□□□□ 0.89
NUP50-209ENST00000432340 ZFYVE28Q9HCC9 887 aa20.62■□□□□ 0.89
NUP50-209ENST00000432340 CEP290O15078 2479 aa20.62■□□□□ 0.89
NUP50-209ENST00000432340 SASH1O94885 1247 aa20.61■□□□□ 0.89
NUP50-209ENST00000432340 PRMT2P55345 433 aa20.61■□□□□ 0.89
NUP50-209ENST00000432340 ISCA1Q9BUE6 129 aa20.61■□□□□ 0.89
NUP50-209ENST00000432340 DEFB129Q9H1M3 183 aa20.61■□□□□ 0.89
NUP50-209ENST00000432340 TESPA1A2RU30 521 aaPredicted RBP20.6■□□□□ 0.89
NUP50-209ENST00000432340 TRIM28Q13263 835 aaKnown RBP20.6■□□□□ 0.89
NUP50-209ENST00000432340 DACT2Q5SW24 774 aa20.6■□□□□ 0.89
NUP50-209ENST00000432340 FBXW7Q969H0 707 aa20.6■□□□□ 0.89
NUP50-209ENST00000432340 MAPK8IP3Q9UPT6 1336 aa20.59■□□□□ 0.89
NUP50-209ENST00000432340 MYO1BO43795 1136 aa20.59■□□□□ 0.89
NUP50-209ENST00000432340 ANKRD18AQ8IVF6 992 aa20.59■□□□□ 0.89
NUP50-209ENST00000432340 ANKRD13AQ8IZ07 590 aa20.59■□□□□ 0.89
NUP50-209ENST00000432340 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.59■□□□□ 0.89
NUP50-209ENST00000432340 KDM3BQ7LBC6 1761 aa20.59■□□□□ 0.89
NUP50-209ENST00000432340 COA1Q9GZY4 146 aa20.58■□□□□ 0.89
NUP50-209ENST00000432340 MED23Q9ULK4 1368 aa20.58■□□□□ 0.88
NUP50-209ENST00000432340 LAMB2P55268 1798 aa20.57■□□□□ 0.88
NUP50-209ENST00000432340 MYCP01106 439 aaPredicted RBP20.57■□□□□ 0.88
NUP50-209ENST00000432340 ZBTB38Q8NAP3 1195 aaPredicted RBP20.57■□□□□ 0.88
NUP50-209ENST00000432340 CLMNQ96JQ2 1002 aa20.57■□□□□ 0.88
NUP50-209ENST00000432340 PRO3102Q9H379 93 aa20.57■□□□□ 0.88
NUP50-209ENST00000432340 ATP5J2-PTCD1G3V325 749 aa20.56■□□□□ 0.88
NUP50-209ENST00000432340 DLGAP5Q15398 846 aa20.56■□□□□ 0.88
NUP50-209ENST00000432340 TAF1CQ15572 869 aaPredicted RBP20.56■□□□□ 0.88
NUP50-209ENST00000432340 RTL5Q5HYW3 569 aaPredicted RBP20.56■□□□□ 0.88
NUP50-209ENST00000432340 GPR153Q6NV75 609 aa20.56■□□□□ 0.88
NUP50-209ENST00000432340 CDC5LQ99459 802 aaKnown RBP20.56■□□□□ 0.88
NUP50-209ENST00000432340 SEC31BQ9NQW1 1179 aa20.56■□□□□ 0.88
NUP50-209ENST00000432340 PPP2R1AP30153 589 aa20.55■□□□□ 0.88
NUP50-209ENST00000432340 SCN9AQ15858 1988 aa20.54■□□□□ 0.88
NUP50-209ENST00000432340 TTLL5Q6EMB2 1281 aa20.54■□□□□ 0.88
NUP50-209ENST00000432340 HTTP42858 3142 aa20.54■□□□□ 0.88
NUP50-209ENST00000432340 WTIPA6NIX2 430 aaPredicted RBP20.53■□□□□ 0.88
NUP50-209ENST00000432340 CAPN2P17655 700 aa20.53■□□□□ 0.88
NUP50-209ENST00000432340 GTF2A2P52657 109 aa20.53■□□□□ 0.88
NUP50-209ENST00000432340 LMOD3Q0VAK6 560 aa20.53■□□□□ 0.88
NUP50-209ENST00000432340 KIAA0825Q8IV33 1275 aa20.53■□□□□ 0.88
NUP50-209ENST00000432340 SH3TC2Q8TF17 1288 aa20.53■□□□□ 0.88
NUP50-209ENST00000432340 ZNF428Q96B54 188 aa20.53■□□□□ 0.88
NUP50-209ENST00000432340 ZBED3Q96IU2 234 aaPredicted RBP20.53■□□□□ 0.88
NUP50-209ENST00000432340 PTPN18Q99952 460 aa20.53■□□□□ 0.88
NUP50-209ENST00000432340 DBF4Q9UBU7 674 aaPredicted RBP20.53■□□□□ 0.88
NUP50-209ENST00000432340 PDE8AO60658 829 aa20.52■□□□□ 0.88
NUP50-209ENST00000432340 HELBQ8NG08 1087 aaPredicted RBP20.52■□□□□ 0.88
NUP50-209ENST00000432340 ZBTB7BO15156 539 aaPredicted RBP20.51■□□□□ 0.87
NUP50-209ENST00000432340 HOXD10P28358 340 aa20.51■□□□□ 0.87
NUP50-209ENST00000432340 MXD3Q9BW11 206 aa20.51■□□□□ 0.87
NUP50-209ENST00000432340 HYPKQ9NX55 129 aa20.51■□□□□ 0.87
NUP50-209ENST00000432340 CHPF2Q9P2E5 772 aa20.51■□□□□ 0.87
NUP50-209ENST00000432340 ZNF804BA4D1E1 1349 aa20.51■□□□□ 0.87
NUP50-209ENST00000432340 SZT2Q5T011 3432 aa20.5■□□□□ 0.87
NUP50-209ENST00000432340 HOXB7P09629 217 aa20.5■□□□□ 0.87
NUP50-209ENST00000432340 MTMR14Q8NCE2 650 aa20.5■□□□□ 0.87
NUP50-209ENST00000432340 OPTNQ96CV9 577 aa20.5■□□□□ 0.87
NUP50-209ENST00000432340 PLEKHF1Q96S99 279 aa20.5■□□□□ 0.87
NUP50-209ENST00000432340 ZCCHC17Q9NP64 241 aaKnown RBP20.5■□□□□ 0.87
NUP50-209ENST00000432340 FZD1Q9UP38 647 aa20.5■□□□□ 0.87
NUP50-209ENST00000432340 STXBP5LQ9Y2K9 1186 aa20.5■□□□□ 0.87
NUP50-209ENST00000432340 CCL15-CCL14A0A0B4J2E2 113 aa20.49■□□□□ 0.87
NUP50-209ENST00000432340 GJB1P08034 283 aa20.49■□□□□ 0.87
NUP50-209ENST00000432340 GJA8P48165 433 aa20.49■□□□□ 0.87
NUP50-209ENST00000432340 LACTBP83111 547 aaPredicted RBP20.49■□□□□ 0.87
NUP50-209ENST00000432340 TNFAIP1Q13829 316 aa20.49■□□□□ 0.87
NUP50-209ENST00000432340 CCL15Q16663 113 aa20.49■□□□□ 0.87
NUP50-209ENST00000432340 HDGFL1Q5TGJ6 251 aa20.49■□□□□ 0.87
NUP50-209ENST00000432340 LEMD3Q9Y2U8 911 aa20.49■□□□□ 0.87
NUP50-209ENST00000432340 GJA5P36382 358 aa20.48■□□□□ 0.87
NUP50-209ENST00000432340 CAP1Q01518 475 aa20.48■□□□□ 0.87
NUP50-209ENST00000432340 GOLGA2Q08379 1002 aa20.48■□□□□ 0.87
NUP50-209ENST00000432340 MS4A4AQ96JQ5 239 aa20.48■□□□□ 0.87
NUP50-209ENST00000432340 BSDC1Q9NW68 430 aaPredicted RBP20.48■□□□□ 0.87
NUP50-209ENST00000432340 EVI5O60447 810 aa20.47■□□□□ 0.87
NUP50-209ENST00000432340 TLR2O60603 784 aa20.47■□□□□ 0.87
NUP50-209ENST00000432340 PCCAP05165 728 aaPredicted RBP20.47■□□□□ 0.87
NUP50-209ENST00000432340 CCT4P50991 539 aaKnown RBP20.47■□□□□ 0.87
NUP50-209ENST00000432340 UBXN2AP68543 259 aa20.47■□□□□ 0.87
NUP50-209ENST00000432340 RIC3Q7Z5B4 369 aa20.47■□□□□ 0.87
NUP50-209ENST00000432340 CCDC191Q8NCU4 936 aa20.47■□□□□ 0.87
NUP50-209ENST00000432340 SHISA4Q96DD7 197 aa20.47■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms