RNA–Protein interactions for RNA: ENST00000431889.6

SMARCE1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2 BASIC

Gene SMARCE1, Length 1,569 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-205ENST00000431889 CDCA5Q96FF9 252 aa18.23■□□□□ 0.51
SMARCE1-205ENST00000431889 BSDC1Q9NW68 430 aaPredicted RBP18.23■□□□□ 0.51
SMARCE1-205ENST00000431889 ZNF316A6NFI3 1004 aaPredicted RBP18.22■□□□□ 0.51
SMARCE1-205ENST00000431889 DNAAF4Q8WXU2 420 aa18.22■□□□□ 0.51
SMARCE1-205ENST00000431889 MYOZ2Q9NPC6 264 aa18.22■□□□□ 0.51
SMARCE1-205ENST00000431889 ZNF646O15015 1829 aaPredicted RBP18.22■□□□□ 0.51
SMARCE1-205ENST00000431889 USP17L8P0C7I0 530 aa18.21■□□□□ 0.51
SMARCE1-205ENST00000431889 ZNF157P51786 506 aaPredicted RBP18.21■□□□□ 0.51
SMARCE1-205ENST00000431889 CASP7P55210 303 aa18.21■□□□□ 0.51
SMARCE1-205ENST00000431889 C2orf69Q8N8R5 385 aa18.21■□□□□ 0.51
SMARCE1-205ENST00000431889 HELBQ8NG08 1087 aaPredicted RBP18.21■□□□□ 0.51
SMARCE1-205ENST00000431889 GMLQ99445 158 aa18.21■□□□□ 0.51
SMARCE1-205ENST00000431889 CHMP4AQ9BY43 222 aa18.21■□□□□ 0.51
SMARCE1-205ENST00000431889 CHMP3Q9Y3E7 222 aa18.21■□□□□ 0.51
SMARCE1-205ENST00000431889 CCDC85CA6NKD9 419 aa18.21■□□□□ 0.51
SMARCE1-205ENST00000431889 FAM155AB1AL88 458 aaPredicted RBP18.21■□□□□ 0.51
SMARCE1-205ENST00000431889 TAF5LO75529 589 aa18.21■□□□□ 0.51
SMARCE1-205ENST00000431889 IGHMBP2P38935 993 aaKnown RBP18.21■□□□□ 0.51
SMARCE1-205ENST00000431889 ZNF280AP59817 542 aaPredicted RBP18.21■□□□□ 0.51
SMARCE1-205ENST00000431889 NBPF9Q3BBW0 867 aa18.21■□□□□ 0.51
SMARCE1-205ENST00000431889 RGMBQ6NW40 437 aa18.21■□□□□ 0.51
SMARCE1-205ENST00000431889 IL16Q14005 1332 aa18.2■□□□□ 0.5
SMARCE1-205ENST00000431889 AGBL3Q8NEM8 1001 aa18.2■□□□□ 0.5
SMARCE1-205ENST00000431889 HHIPL1Q96JK4 782 aa18.2■□□□□ 0.5
SMARCE1-205ENST00000431889 MED23Q9ULK4 1368 aa18.2■□□□□ 0.5
SMARCE1-205ENST00000431889 SASH1O94885 1247 aa18.19■□□□□ 0.5
SMARCE1-205ENST00000431889 BRPF1P55201 1214 aaPredicted RBP18.19■□□□□ 0.5
SMARCE1-205ENST00000431889 KIF23Q02241 960 aaPredicted RBP18.19■□□□□ 0.5
SMARCE1-205ENST00000431889 DACT2Q5SW24 774 aa18.19■□□□□ 0.5
SMARCE1-205ENST00000431889 PODNQ7Z5L7 613 aa18.19■□□□□ 0.5
SMARCE1-205ENST00000431889 MPHOSPH8Q99549 860 aa18.19■□□□□ 0.5
SMARCE1-205ENST00000431889 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.19■□□□□ 0.5
SMARCE1-205ENST00000431889 NOGQ13253 232 aa18.18■□□□□ 0.5
SMARCE1-205ENST00000431889 ZNF594Q96JF6 807 aaPredicted RBP18.18■□□□□ 0.5
SMARCE1-205ENST00000431889 JAG2Q9Y219 1238 aa18.18■□□□□ 0.5
SMARCE1-205ENST00000431889 ZNF804BA4D1E1 1349 aa18.18■□□□□ 0.5
SMARCE1-205ENST00000431889 KCNJ4P48050 445 aa18.17■□□□□ 0.5
SMARCE1-205ENST00000431889 CHRNDQ07001 517 aa18.17■□□□□ 0.5
SMARCE1-205ENST00000431889 KIAA0825Q8IV33 1275 aa18.17■□□□□ 0.5
SMARCE1-205ENST00000431889 LINS1Q8NG48 757 aa18.17■□□□□ 0.5
SMARCE1-205ENST00000431889 MYH16Q9H6N6 1097 aa18.17■□□□□ 0.5
SMARCE1-205ENST00000431889 PLIN1O60240 522 aa18.17■□□□□ 0.5
SMARCE1-205ENST00000431889 GTF2IP78347 998 aa18.17■□□□□ 0.5
SMARCE1-205ENST00000431889 FOXO4P98177 505 aa18.17■□□□□ 0.5
SMARCE1-205ENST00000431889 PRKG1Q13976 671 aa18.17■□□□□ 0.5
SMARCE1-205ENST00000431889 EPHA10Q5JZY3 1008 aa18.17■□□□□ 0.5
SMARCE1-205ENST00000431889 WDR63Q8IWG1 891 aa18.17■□□□□ 0.5
SMARCE1-205ENST00000431889 CACNA1FO60840 1977 aa18.16■□□□□ 0.5
SMARCE1-205ENST00000431889 A0A1B0GUL6 1792 aa18.16■□□□□ 0.5
SMARCE1-205ENST00000431889 UBE2Q2LH0YL09 131 aa18.16■□□□□ 0.5
SMARCE1-205ENST00000431889 CSF1RP07333 972 aa18.16■□□□□ 0.5
SMARCE1-205ENST00000431889 MKRN3Q13064 507 aaKnown RBP18.16■□□□□ 0.5
SMARCE1-205ENST00000431889 SLC4A10Q6U841 1118 aa18.16■□□□□ 0.5
SMARCE1-205ENST00000431889 PLA2G12BQ9BX93 195 aa18.16■□□□□ 0.5
SMARCE1-205ENST00000431889 FZD1Q9UP38 647 aa18.16■□□□□ 0.5
SMARCE1-205ENST00000431889 PCDHAC2Q9Y5I4 1007 aa18.16■□□□□ 0.5
SMARCE1-205ENST00000431889 ANKRD18BA2A2Z9 1011 aa18.15■□□□□ 0.5
SMARCE1-205ENST00000431889 TRPA1O75762 1119 aa18.15■□□□□ 0.5
SMARCE1-205ENST00000431889 BEND3Q5T5X7 828 aa18.15■□□□□ 0.5
SMARCE1-205ENST00000431889 TTLL5Q6EMB2 1281 aa18.15■□□□□ 0.5
SMARCE1-205ENST00000431889 MCOLN1Q9GZU1 580 aa18.15■□□□□ 0.5
SMARCE1-205ENST00000431889 COA1Q9GZY4 146 aa18.15■□□□□ 0.5
SMARCE1-205ENST00000431889 LEMD3Q9Y2U8 911 aa18.15■□□□□ 0.5
SMARCE1-205ENST00000431889 F8W031 263 aaPredicted RBP18.14■□□□□ 0.49
SMARCE1-205ENST00000431889 AKAP11Q9UKA4 1901 aa18.13■□□□□ 0.49
SMARCE1-205ENST00000431889 WNT10BO00744 389 aa18.13■□□□□ 0.49
SMARCE1-205ENST00000431889 SLC10A3P09131 477 aa18.13■□□□□ 0.49
SMARCE1-205ENST00000431889 DGKZQ13574 1117 aa18.13■□□□□ 0.49
SMARCE1-205ENST00000431889 TTLL12Q14166 644 aaPredicted RBP18.13■□□□□ 0.49
SMARCE1-205ENST00000431889 STRIP1Q5VSL9 837 aa18.13■□□□□ 0.49
SMARCE1-205ENST00000431889 LMBR1LQ6UX01 489 aa18.13■□□□□ 0.49
SMARCE1-205ENST00000431889 RASAL3Q86YV0 1011 aa18.13■□□□□ 0.49
SMARCE1-205ENST00000431889 IFIT5Q13325 482 aaKnown RBP18.13■□□□□ 0.49
SMARCE1-205ENST00000431889 OGFOD1Q8N543 542 aa18.13■□□□□ 0.49
SMARCE1-205ENST00000431889 CCDC102AQ96A19 550 aa18.13■□□□□ 0.49
SMARCE1-205ENST00000431889 CSRNP1Q96S65 589 aa18.13■□□□□ 0.49
SMARCE1-205ENST00000431889 ANKRD2Q9GZV1 360 aa18.13■□□□□ 0.49
SMARCE1-205ENST00000431889 RNF186Q9NXI6 227 aa18.13■□□□□ 0.49
SMARCE1-205ENST00000431889 ZNF609O15014 1411 aa18.12■□□□□ 0.49
SMARCE1-205ENST00000431889 CERS5Q8N5B7 392 aa18.12■□□□□ 0.49
SMARCE1-205ENST00000431889 CD209Q9NNX6 404 aa18.12■□□□□ 0.49
SMARCE1-205ENST00000431889 CA12O43570 354 aa18.11■□□□□ 0.49
SMARCE1-205ENST00000431889 ZEB1P37275 1124 aaPredicted RBP18.11■□□□□ 0.49
SMARCE1-205ENST00000431889 PAPPA2Q9BXP8 1791 aa18.1■□□□□ 0.49
SMARCE1-205ENST00000431889 TAF7LQ5H9L4 462 aa18.1■□□□□ 0.49
SMARCE1-205ENST00000431889 AOX1Q06278 1338 aa18.1■□□□□ 0.49
SMARCE1-205ENST00000431889 GRM8O00222 908 aa18.09■□□□□ 0.49
SMARCE1-205ENST00000431889 C9orf78Q9NZ63 289 aaPredicted RBP18.09■□□□□ 0.49
SMARCE1-205ENST00000431889 PITPNM2Q9BZ72 1349 aa18.09■□□□□ 0.49
SMARCE1-205ENST00000431889 IRS2Q9Y4H2 1338 aa18.09■□□□□ 0.49
SMARCE1-205ENST00000431889 SUCLG2Q96I99 432 aa18.08■□□□□ 0.49
SMARCE1-205ENST00000431889 PUS3Q9BZE2 481 aaKnown RBP18.08■□□□□ 0.49
SMARCE1-205ENST00000431889 CNNM1Q9NRU3 951 aa18.08■□□□□ 0.49
SMARCE1-205ENST00000431889 CLRN2A0PK11 232 aa18.08■□□□□ 0.48
SMARCE1-205ENST00000431889 CCDC57Q2TAC2 916 aa18.08■□□□□ 0.48
SMARCE1-205ENST00000431889 NCBP3Q53F19 620 aaKnown RBP18.08■□□□□ 0.48
SMARCE1-205ENST00000431889 LDHAL6AQ6ZMR3 332 aa18.08■□□□□ 0.48
SMARCE1-205ENST00000431889 MYO3BQ8WXR4 1341 aa18.07■□□□□ 0.48
SMARCE1-205ENST00000431889 TBC1D8O95759 1140 aa18.06■□□□□ 0.48
SMARCE1-205ENST00000431889 NBPF7P0C2Y1 421 aaPredicted RBP18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms