RNA–Protein interactions for RNA: ENST00000431737.1

LINC00840-201, long intergenic non-protein coding RNA 840, humanhuman

TSL 2 BASIC

Gene LINC00840, Length 1,974 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00840-201ENST00000431737 CCDC152Q4G0S7 254 aa15.09■□□□□ 0.01
LINC00840-201ENST00000431737 LPIN2Q92539 896 aa15.09■□□□□ 0.01
LINC00840-201ENST00000431737 USP21Q9UK80 565 aa15.09■□□□□ 0.01
LINC00840-201ENST00000431737 TPCN1Q9ULQ1 816 aa15.09■□□□□ 0.01
LINC00840-201ENST00000431737 HMGB1P09429 215 aaKnown RBP15.08■□□□□ 0
LINC00840-201ENST00000431737 NEK1Q96PY6 1258 aa15.08■□□□□ 0
LINC00840-201ENST00000431737 SMC3Q9UQE7 1217 aa15.08■□□□□ 0
LINC00840-201ENST00000431737 NIP7Q9Y221 180 aaKnown RBP eCLIP15.08■□□□□ 0
LINC00840-201ENST00000431737 UQCRFS1P1P0C7P4 283 aa15.07■□□□□ 0
LINC00840-201ENST00000431737 HSPD1P10809 573 aaKnown RBP15.07■□□□□ 0
LINC00840-201ENST00000431737 MCAMP43121 646 aa15.07■□□□□ 0
LINC00840-201ENST00000431737 ZAP70P43403 619 aa15.07■□□□□ 0
LINC00840-201ENST00000431737 COL9A3Q14050 684 aaPredicted RBP15.07■□□□□ 0
LINC00840-201ENST00000431737 TTF1Q15361 905 aaPredicted RBP15.07■□□□□ 0
LINC00840-201ENST00000431737 APPBP2Q92624 585 aa15.07■□□□□ 0
LINC00840-201ENST00000431737 GOLGA6L3A6NEY3 463 aa15.07■□□□□ 0
LINC00840-201ENST00000431737 M0R2C6 588 aa15.07■□□□□ 0
LINC00840-201ENST00000431737 HCLS1P14317 486 aaPredicted RBP15.07■□□□□ 0
LINC00840-201ENST00000431737 FKBP4Q02790 459 aaKnown RBP eCLIP15.07■□□□□ 0
LINC00840-201ENST00000431737 OSBP2Q969R2 916 aa15.07■□□□□ 0
LINC00840-201ENST00000431737 GZF1Q9H116 711 aaPredicted RBP15.07■□□□□ 0
LINC00840-201ENST00000431737 COL4A1P02462 1669 aa15.07■□□□□ 0
LINC00840-201ENST00000431737 CCDC83Q8IWF9 413 aa15.06■□□□□ 0
LINC00840-201ENST00000431737 TMEM87AQ8NBN3 555 aa15.06■□□□□ 0
LINC00840-201ENST00000431737 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.06■□□□□ 0
LINC00840-201ENST00000431737 DDX49Q9Y6V7 483 aaKnown RBP15.06■□□□□ 0
LINC00840-201ENST00000431737 STX6O43752 255 aa15.05■□□□□ 0
LINC00840-201ENST00000431737 ZSCAN22P10073 491 aaPredicted RBP15.05■□□□□ 0
LINC00840-201ENST00000431737 SYT1P21579 422 aa15.05■□□□□ 0
LINC00840-201ENST00000431737 ZSCAN25Q6NSZ9 544 aa15.05■□□□□ 0
LINC00840-201ENST00000431737 STOX1Q6ZVD7 989 aa15.05■□□□□ 0
LINC00840-201ENST00000431737 AGXT2Q9BYV1 514 aa15.05■□□□□ 0
LINC00840-201ENST00000431737 FOXP2O15409 715 aa15.05■□□□□ -0
LINC00840-201ENST00000431737 ONECUT3O60422 494 aaPredicted RBP15.05■□□□□ -0
LINC00840-201ENST00000431737 SLC5A1P13866 664 aa15.05■□□□□ -0
LINC00840-201ENST00000431737 SLFNL1Q499Z3 407 aa15.05■□□□□ -0
LINC00840-201ENST00000431737 CCDC102BQ68D86 513 aa15.05■□□□□ -0
LINC00840-201ENST00000431737 FBXL16Q8N461 479 aa15.05■□□□□ -0
LINC00840-201ENST00000431737 RPS6KA4O75676 772 aa15.04■□□□□ -0
LINC00840-201ENST00000431737 GJB2P29033 226 aa15.04■□□□□ -0
LINC00840-201ENST00000431737 ADD2P35612 726 aa15.04■□□□□ -0
LINC00840-201ENST00000431737 UBE3CQ15386 1083 aa15.04■□□□□ -0
LINC00840-201ENST00000431737 SF3B3Q15393 1217 aaKnown RBP15.04■□□□□ -0
LINC00840-201ENST00000431737 SLC10A5Q5PT55 438 aa15.04■□□□□ -0
LINC00840-201ENST00000431737 LARP6Q9BRS8 491 aaKnown RBP15.04■□□□□ -0
LINC00840-201ENST00000431737 CTNNA3Q9UI47 895 aa15.04■□□□□ -0
LINC00840-201ENST00000431737 MBD3O95983 291 aa15.04■□□□□ -0
LINC00840-201ENST00000431737 EXOSC10Q01780 885 aaKnown RBP15.04■□□□□ -0
LINC00840-201ENST00000431737 PI16Q6UXB8 463 aa15.04■□□□□ -0
LINC00840-201ENST00000431737 MPHOSPH8Q99549 860 aa15.04■□□□□ -0
LINC00840-201ENST00000431737 SEC31BQ9NQW1 1179 aa15.04■□□□□ -0
LINC00840-201ENST00000431737 NARFQ9UHQ1 456 aa15.04■□□□□ -0
LINC00840-201ENST00000431737 CHD4Q14839 1912 aa15.03■□□□□ -0
LINC00840-201ENST00000431737 F13A1P00488 732 aa15.03■□□□□ -0
LINC00840-201ENST00000431737 IGHMBP2P38935 993 aaKnown RBP15.03■□□□□ -0
LINC00840-201ENST00000431737 PHKA1P46020 1223 aa15.03■□□□□ -0
LINC00840-201ENST00000431737 MRE11P49959 708 aa15.03■□□□□ -0
LINC00840-201ENST00000431737 ZNF445P59923 1031 aa15.03■□□□□ -0
LINC00840-201ENST00000431737 DHX32Q7L7V1 743 aaKnown RBP15.03■□□□□ -0
LINC00840-201ENST00000431737 GTF3C6Q969F1 213 aa15.03■□□□□ -0
LINC00840-201ENST00000431737 CDC5LQ99459 802 aaKnown RBP15.03■□□□□ -0
LINC00840-201ENST00000431737 BCL2L12Q9HB09 334 aa15.03■□□□□ -0
LINC00840-201ENST00000431737 MTMR6Q9Y217 621 aa15.03■□□□□ -0
LINC00840-201ENST00000431737 ATP6V1DQ9Y5K8 247 aa15.03■□□□□ -0
LINC00840-201ENST00000431737 TIAM2Q8IVF5 1701 aa15.03■□□□□ -0
LINC00840-201ENST00000431737 PRPF40AO75400 957 aaKnown RBP15.02■□□□□ -0
LINC00840-201ENST00000431737 PDCP20941 246 aa15.02■□□□□ -0
LINC00840-201ENST00000431737 PTF1AQ7RTS3 328 aa15.02■□□□□ -0
LINC00840-201ENST00000431737 CERKQ8TCT0 537 aa15.02■□□□□ -0
LINC00840-201ENST00000431737 GJD4Q96KN9 370 aaPredicted RBP15.02■□□□□ -0
LINC00840-201ENST00000431737 TAF1P21675 1872 aa15.02■□□□□ -0
LINC00840-201ENST00000431737 MYH15Q9Y2K3 1946 aa15.02□□□□□ -0.01
LINC00840-201ENST00000431737 E7EWF7 191 aa15.02□□□□□ -0.01
LINC00840-201ENST00000431737 NECAB1Q8N987 351 aa15.02□□□□□ -0.01
LINC00840-201ENST00000431737 GPT2Q8TD30 523 aa15.02□□□□□ -0.01
LINC00840-201ENST00000431737 TCEANC2Q96MN5 208 aa15.02□□□□□ -0.01
LINC00840-201ENST00000431737 PIH1D3Q9NQM4 214 aaKnown RBP15.02□□□□□ -0.01
LINC00840-201ENST00000431737 ZMYM6O95789 1325 aa15.01□□□□□ -0.01
LINC00840-201ENST00000431737 UBR3Q6ZT12 1888 aa15.01□□□□□ -0.01
LINC00840-201ENST00000431737 TCRBV5S4A2TA0A5A2 114 aa15.01□□□□□ -0.01
LINC00840-201ENST00000431737 WASHC4Q2M389 1173 aa15.01□□□□□ -0.01
LINC00840-201ENST00000431737 Q6ZUG5 572 aa15.01□□□□□ -0.01
LINC00840-201ENST00000431737 PUS7LQ9H0K6 701 aaKnown RBP15.01□□□□□ -0.01
LINC00840-201ENST00000431737 WDR19Q8NEZ3 1342 aa15.01□□□□□ -0.01
LINC00840-201ENST00000431737 FAM177BA6PVY3 158 aa15□□□□□ -0.01
LINC00840-201ENST00000431737 GPAA1O43292 621 aa15□□□□□ -0.01
LINC00840-201ENST00000431737 ERFEQ4G0M1 354 aa15□□□□□ -0.01
LINC00840-201ENST00000431737 FOXD4L5Q5VV16 416 aaPredicted RBP15□□□□□ -0.01
LINC00840-201ENST00000431737 SPATA5Q8NB90 893 aa15□□□□□ -0.01
LINC00840-201ENST00000431737 FOXD4L4Q8WXT5 416 aaPredicted RBP15□□□□□ -0.01
LINC00840-201ENST00000431737 NYXQ9GZU5 481 aa15□□□□□ -0.01
LINC00840-201ENST00000431737 ZNF804BA4D1E1 1349 aa15□□□□□ -0.01
LINC00840-201ENST00000431737 MYH13Q9UKX3 1938 aa15□□□□□ -0.01
LINC00840-201ENST00000431737 PFKFB2O60825 505 aa15□□□□□ -0.01
LINC00840-201ENST00000431737 XRCC6P12956 609 aaKnown RBP eCLIP15□□□□□ -0.01
LINC00840-201ENST00000431737 PDE6AP16499 860 aa15□□□□□ -0.01
LINC00840-201ENST00000431737 EVCP57679 992 aa15□□□□□ -0.01
LINC00840-201ENST00000431737 RASGRF1Q13972 1273 aa15□□□□□ -0.01
LINC00840-201ENST00000431737 IMMTQ16891 758 aaKnown RBP15□□□□□ -0.01
LINC00840-201ENST00000431737 CHAMP1Q96JM3 812 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms