RNA–Protein interactions for RNA: ENST00000431540.7

CDH13-203, Transcript of cadherin 13, humanhuman

TSL 1 (best) BASIC

Gene CDH13, Length 831 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-203ENST00000431540 VIL1P09327 827 aaKnown RBP10.76□□□□□ -0.69
CDH13-203ENST00000431540 HCLS1P14317 486 aaPredicted RBP10.76□□□□□ -0.69
CDH13-203ENST00000431540 MLLT1Q03111 559 aaPredicted RBP10.76□□□□□ -0.69
CDH13-203ENST00000431540 PROSER3Q2NL68 480 aa10.76□□□□□ -0.69
CDH13-203ENST00000431540 C2orf69Q8N8R5 385 aa10.76□□□□□ -0.69
CDH13-203ENST00000431540 AGBL3Q8NEM8 1001 aa10.76□□□□□ -0.69
CDH13-203ENST00000431540 DCPSQ96C86 337 aaKnown RBP10.76□□□□□ -0.69
CDH13-203ENST00000431540 ZC3H12CQ9C0D7 883 aaKnown RBP10.76□□□□□ -0.69
CDH13-203ENST00000431540 PDE4DIPQ5VU43 2346 aa10.75□□□□□ -0.69
CDH13-203ENST00000431540 YDJCA8MPS7 323 aa10.75□□□□□ -0.69
CDH13-203ENST00000431540 TRAF5O00463 557 aa10.75□□□□□ -0.69
CDH13-203ENST00000431540 RAD17O75943 681 aa10.75□□□□□ -0.69
CDH13-203ENST00000431540 RGS20O76081 388 aa10.75□□□□□ -0.69
CDH13-203ENST00000431540 AIMP1Q12904 312 aaKnown RBP10.75□□□□□ -0.69
CDH13-203ENST00000431540 HDGFL1Q5TGJ6 251 aa10.75□□□□□ -0.69
CDH13-203ENST00000431540 PAXIP1Q6ZW49 1069 aaPredicted RBP10.75□□□□□ -0.69
CDH13-203ENST00000431540 ZBTB38Q8NAP3 1195 aaPredicted RBP10.75□□□□□ -0.69
CDH13-203ENST00000431540 CCDC191Q8NCU4 936 aa10.75□□□□□ -0.69
CDH13-203ENST00000431540 NSFL1CQ9UNZ2 370 aaKnown RBP10.75□□□□□ -0.69
CDH13-203ENST00000431540 MYBBP1AQ9BQG0 1328 aaKnown RBP10.75□□□□□ -0.69
CDH13-203ENST00000431540 DUOX1Q9NRD9 1551 aa10.74□□□□□ -0.69
CDH13-203ENST00000431540 TCERG1O14776 1098 aaKnown RBP10.74□□□□□ -0.69
CDH13-203ENST00000431540 ZNF853P0CG23 659 aa10.74□□□□□ -0.69
CDH13-203ENST00000431540 RGMBQ6NW40 437 aa10.74□□□□□ -0.69
CDH13-203ENST00000431540 PODNQ7Z5L7 613 aa10.74□□□□□ -0.69
CDH13-203ENST00000431540 GLIS2Q9BZE0 524 aaPredicted RBP10.74□□□□□ -0.69
CDH13-203ENST00000431540 IRX2Q9BZI1 471 aaPredicted RBP10.74□□□□□ -0.69
CDH13-203ENST00000431540 PITPNM2Q9BZ72 1349 aa10.74□□□□□ -0.69
CDH13-203ENST00000431540 PSMD14O00487 310 aa10.73□□□□□ -0.69
CDH13-203ENST00000431540 IRS4O14654 1257 aaPredicted RBP10.73□□□□□ -0.69
CDH13-203ENST00000431540 SLC34A2O95436 690 aa10.73□□□□□ -0.69
CDH13-203ENST00000431540 HUNKP57058 714 aa10.73□□□□□ -0.69
CDH13-203ENST00000431540 GNAI1P63096 354 aa10.73□□□□□ -0.69
CDH13-203ENST00000431540 NOM1Q5C9Z4 860 aaKnown RBP10.73□□□□□ -0.69
CDH13-203ENST00000431540 ADGRD1Q6QNK2 874 aa10.73□□□□□ -0.69
CDH13-203ENST00000431540 KRT26Q7Z3Y9 468 aa10.73□□□□□ -0.69
CDH13-203ENST00000431540 TBC1D16Q8TBP0 767 aa10.73□□□□□ -0.69
CDH13-203ENST00000431540 GBA2Q9HCG7 927 aaPredicted RBP10.73□□□□□ -0.69
CDH13-203ENST00000431540 CHPF2Q9P2E5 772 aa10.73□□□□□ -0.69
CDH13-203ENST00000431540 POLLQ9UGP5 575 aa10.73□□□□□ -0.69
CDH13-203ENST00000431540 SCN9AQ15858 1988 aa10.73□□□□□ -0.69
CDH13-203ENST00000431540 C6orf229H3BNL8 230 aa10.72□□□□□ -0.69
CDH13-203ENST00000431540 PDE8AO60658 829 aa10.72□□□□□ -0.69
CDH13-203ENST00000431540 AOC2O75106 756 aa10.72□□□□□ -0.69
CDH13-203ENST00000431540 DDX58O95786 925 aaKnown RBP10.72□□□□□ -0.69
CDH13-203ENST00000431540 PCCAP05165 728 aaPredicted RBP10.72□□□□□ -0.69
CDH13-203ENST00000431540 ZNF280AP59817 542 aaPredicted RBP10.72□□□□□ -0.69
CDH13-203ENST00000431540 FMR1Q06787 632 aaKnown RBP eCLIP10.72□□□□□ -0.69
CDH13-203ENST00000431540 WDR43Q15061 677 aaKnown RBP eCLIP10.72□□□□□ -0.69
CDH13-203ENST00000431540 PKN2Q16513 984 aaKnown RBP10.72□□□□□ -0.69
CDH13-203ENST00000431540 CCDC152Q4G0S7 254 aa10.72□□□□□ -0.69
CDH13-203ENST00000431540 DUSP27Q5VZP5 1158 aa10.72□□□□□ -0.69
CDH13-203ENST00000431540 USP48Q86UV5 1035 aa10.72□□□□□ -0.69
CDH13-203ENST00000431540 SULF1Q8IWU6 871 aa10.72□□□□□ -0.69
CDH13-203ENST00000431540 CELF1Q92879 486 aaKnown RBP10.72□□□□□ -0.69
CDH13-203ENST00000431540 FAM89AQ96GI7 184 aa10.72□□□□□ -0.69
CDH13-203ENST00000431540 IFT57Q9NWB7 429 aa10.72□□□□□ -0.69
CDH13-203ENST00000431540 FAM155AB1AL88 458 aaPredicted RBP10.71□□□□□ -0.69
CDH13-203ENST00000431540 ECE2O60344 883 aa10.71□□□□□ -0.69
CDH13-203ENST00000431540 ANXA1P04083 346 aa10.71□□□□□ -0.69
CDH13-203ENST00000431540 ATP2B4P23634 1241 aa10.71□□□□□ -0.69
CDH13-203ENST00000431540 RIC3Q7Z5B4 369 aa10.71□□□□□ -0.69
CDH13-203ENST00000431540 TRPM4Q8TD43 1214 aa10.71□□□□□ -0.69
CDH13-203ENST00000431540 MYO3BQ8WXR4 1341 aa10.7□□□□□ -0.7
CDH13-203ENST00000431540 UNCXA6NJT0 531 aa10.7□□□□□ -0.7
CDH13-203ENST00000431540 CCDC85CA6NKD9 419 aa10.7□□□□□ -0.7
CDH13-203ENST00000431540 VASPP50552 380 aaPredicted RBP10.7□□□□□ -0.7
CDH13-203ENST00000431540 GPSM2P81274 684 aa10.7□□□□□ -0.7
CDH13-203ENST00000431540 SAMD7Q7Z3H4 446 aa10.7□□□□□ -0.7
CDH13-203ENST00000431540 MCOLN1Q9GZU1 580 aa10.7□□□□□ -0.7
CDH13-203ENST00000431540 GGA1Q9UJY5 639 aa10.7□□□□□ -0.7
CDH13-203ENST00000431540 RTL9Q8NET4 1388 aa10.69□□□□□ -0.7
CDH13-203ENST00000431540 XDHP47989 1333 aa10.69□□□□□ -0.7
CDH13-203ENST00000431540 NUDT7P0C024 238 aa10.69□□□□□ -0.7
CDH13-203ENST00000431540 ZNF157P51786 506 aaPredicted RBP10.69□□□□□ -0.7
CDH13-203ENST00000431540 KIF4BQ2VIQ3 1234 aa10.69□□□□□ -0.7
CDH13-203ENST00000431540 CCDC30Q5VVM6 783 aa10.69□□□□□ -0.7
CDH13-203ENST00000431540 RSBN1LQ6PCB5 846 aaPredicted RBP10.69□□□□□ -0.7
CDH13-203ENST00000431540 MS4A4AQ96JQ5 239 aa10.69□□□□□ -0.7
CDH13-203ENST00000431540 GMLQ99445 158 aa10.69□□□□□ -0.7
CDH13-203ENST00000431540 CDC5LQ99459 802 aaKnown RBP10.69□□□□□ -0.7
CDH13-203ENST00000431540 METTL22Q9BUU2 404 aaPredicted RBP10.69□□□□□ -0.7
CDH13-203ENST00000431540 DBNDD1Q9H9R9 158 aa10.69□□□□□ -0.7
CDH13-203ENST00000431540 BSDC1Q9NW68 430 aaPredicted RBP10.69□□□□□ -0.7
CDH13-203ENST00000431540 CWC25Q9NXE8 425 aaPredicted RBP10.69□□□□□ -0.7
CDH13-203ENST00000431540 ANKIB1Q9P2G1 1089 aa10.69□□□□□ -0.7
CDH13-203ENST00000431540 ADAMTS8Q9UP79 889 aa10.69□□□□□ -0.7
CDH13-203ENST00000431540 PAPPA2Q9BXP8 1791 aa10.68□□□□□ -0.7
CDH13-203ENST00000431540 USP17L3A6NCW0 530 aa10.68□□□□□ -0.7
CDH13-203ENST00000431540 USP17L4A6NCW7 530 aa10.68□□□□□ -0.7
CDH13-203ENST00000431540 ATP5J2-PTCD1G3V325 749 aa10.68□□□□□ -0.7
CDH13-203ENST00000431540 SLC10A3P09131 477 aa10.68□□□□□ -0.7
CDH13-203ENST00000431540 USP17L8P0C7I0 530 aa10.68□□□□□ -0.7
CDH13-203ENST00000431540 DGKZQ13574 1117 aa10.68□□□□□ -0.7
CDH13-203ENST00000431540 NEUROD2Q15784 382 aa10.68□□□□□ -0.7
CDH13-203ENST00000431540 FAM161AQ3B820 660 aa10.68□□□□□ -0.7
CDH13-203ENST00000431540 USP17L1Q7RTZ2 530 aa10.68□□□□□ -0.7
CDH13-203ENST00000431540 ANKRD18AQ8IVF6 992 aa10.68□□□□□ -0.7
CDH13-203ENST00000431540 CFHR5Q9BXR6 569 aa10.68□□□□□ -0.7
CDH13-203ENST00000431540 MBIPQ9NS73 344 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms