RNA–Protein interactions for RNA: ENST00000430071.6

UBE3D-204, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 5

Gene UBE3D, Length 1,352 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-204ENST00000430071 ABT1Q9ULW3 272 aaKnown RBP21.42■■□□□ 1.02
UBE3D-204ENST00000430071 ZNF804BA4D1E1 1349 aa21.41■■□□□ 1.02
UBE3D-204ENST00000430071 IFIT5Q13325 482 aaKnown RBP21.41■■□□□ 1.02
UBE3D-204ENST00000430071 COL13A1Q5TAT6 717 aaPredicted RBP21.41■■□□□ 1.02
UBE3D-204ENST00000430071 USP48Q86UV5 1035 aa21.41■■□□□ 1.02
UBE3D-204ENST00000430071 ZC3H15Q8WU90 426 aaKnown RBP21.41■■□□□ 1.02
UBE3D-204ENST00000430071 LEMD3Q9Y2U8 911 aa21.41■■□□□ 1.02
UBE3D-204ENST00000430071 IRS2Q9Y4H2 1338 aa21.41■■□□□ 1.02
UBE3D-204ENST00000430071 USP17L3A6NCW0 530 aa21.4■■□□□ 1.02
UBE3D-204ENST00000430071 USP17L4A6NCW7 530 aa21.4■■□□□ 1.02
UBE3D-204ENST00000430071 CELF2O95319 508 aaKnown RBP21.4■■□□□ 1.02
UBE3D-204ENST00000430071 RARSP54136 660 aaKnown RBP21.4■■□□□ 1.02
UBE3D-204ENST00000430071 ALDH1L2Q3SY69 923 aa21.4■■□□□ 1.02
UBE3D-204ENST00000430071 USP17L1Q7RTZ2 530 aa21.4■■□□□ 1.02
UBE3D-204ENST00000430071 PODNQ7Z5L7 613 aa21.4■■□□□ 1.02
UBE3D-204ENST00000430071 KIF4BQ2VIQ3 1234 aa21.39■■□□□ 1.02
UBE3D-204ENST00000430071 ZNF408Q9H9D4 720 aa21.39■■□□□ 1.02
UBE3D-204ENST00000430071 ADM5C9JUS6 153 aa21.38■■□□□ 1.01
UBE3D-204ENST00000430071 CYP4F22Q6NT55 531 aa21.38■■□□□ 1.01
UBE3D-204ENST00000430071 PUS3Q9BZE2 481 aaKnown RBP21.38■■□□□ 1.01
UBE3D-204ENST00000430071 ANKRD2Q9GZV1 360 aa21.38■■□□□ 1.01
UBE3D-204ENST00000430071 SMC4Q9NTJ3 1288 aa21.38■■□□□ 1.01
UBE3D-204ENST00000430071 ZNF609O15014 1411 aa21.38■■□□□ 1.01
UBE3D-204ENST00000430071 UTYO14607 1347 aa21.38■■□□□ 1.01
UBE3D-204ENST00000430071 PLIN1O60240 522 aa21.37■■□□□ 1.01
UBE3D-204ENST00000430071 ZNF280AP59817 542 aaPredicted RBP21.37■■□□□ 1.01
UBE3D-204ENST00000430071 DACT2Q5SW24 774 aa21.37■■□□□ 1.01
UBE3D-204ENST00000430071 CDC37L1Q7L3B6 337 aa21.37■■□□□ 1.01
UBE3D-204ENST00000430071 AGBL3Q8NEM8 1001 aa21.37■■□□□ 1.01
UBE3D-204ENST00000430071 FBXW7Q969H0 707 aa21.37■■□□□ 1.01
UBE3D-204ENST00000430071 SCAF8Q9UPN6 1271 aaKnown RBP21.37■■□□□ 1.01
UBE3D-204ENST00000430071 TLL2Q9Y6L7 1015 aa21.37■■□□□ 1.01
UBE3D-204ENST00000430071 WDR33Q9C0J8 1336 aaKnown RBP21.37■■□□□ 1.01
UBE3D-204ENST00000430071 ANKRD44Q8N8A2 993 aa21.36■■□□□ 1.01
UBE3D-204ENST00000430071 COA1Q9GZY4 146 aa21.36■■□□□ 1.01
UBE3D-204ENST00000430071 BICC1Q9H694 974 aaKnown RBP21.36■■□□□ 1.01
UBE3D-204ENST00000430071 PTPRCP08575 1304 aa21.36■■□□□ 1.01
UBE3D-204ENST00000430071 FOXN1O15353 648 aa21.36■■□□□ 1.01
UBE3D-204ENST00000430071 GRM1Q13255 1194 aa21.36■■□□□ 1.01
UBE3D-204ENST00000430071 CCDC57Q2TAC2 916 aa21.36■■□□□ 1.01
UBE3D-204ENST00000430071 LDHAL6AQ6ZMR3 332 aa21.36■■□□□ 1.01
UBE3D-204ENST00000430071 KRT26Q7Z3Y9 468 aa21.36■■□□□ 1.01
UBE3D-204ENST00000430071 USP44Q9H0E7 712 aa21.36■■□□□ 1.01
UBE3D-204ENST00000430071 GGA3Q9NZ52 723 aa21.36■■□□□ 1.01
UBE3D-204ENST00000430071 THSD7BQ9C0I4 1608 aa21.35■■□□□ 1.01
UBE3D-204ENST00000430071 KCNJ4P48050 445 aa21.35■■□□□ 1.01
UBE3D-204ENST00000430071 IFFO2Q5TF58 517 aa21.35■■□□□ 1.01
UBE3D-204ENST00000430071 BCAR3O75815 825 aa21.34■■□□□ 1.01
UBE3D-204ENST00000430071 USP17L8P0C7I0 530 aa21.34■■□□□ 1.01
UBE3D-204ENST00000430071 SCARF1Q14162 830 aa21.34■■□□□ 1.01
UBE3D-204ENST00000430071 PAXIP1Q6ZW49 1069 aaPredicted RBP21.34■■□□□ 1.01
UBE3D-204ENST00000430071 SAPCD2Q86UD0 394 aa21.34■■□□□ 1.01
UBE3D-204ENST00000430071 CAPNS2Q96L46 248 aa21.34■■□□□ 1.01
UBE3D-204ENST00000430071 CD209Q9NNX6 404 aa21.34■■□□□ 1.01
UBE3D-204ENST00000430071 MYOZ2Q9NPC6 264 aa21.34■■□□□ 1.01
UBE3D-204ENST00000430071 ECM29Q5VYK3 1845 aa21.33■■□□□ 1.01
UBE3D-204ENST00000430071 AOC2O75106 756 aa21.33■■□□□ 1
UBE3D-204ENST00000430071 BRPF1P55201 1214 aaPredicted RBP21.33■■□□□ 1
UBE3D-204ENST00000430071 GTF2IP78347 998 aa21.33■■□□□ 1
UBE3D-204ENST00000430071 TAF7LQ5H9L4 462 aa21.33■■□□□ 1
UBE3D-204ENST00000430071 TTLL5Q6EMB2 1281 aa21.33■■□□□ 1
UBE3D-204ENST00000430071 CNNM1Q9NRU3 951 aa21.33■■□□□ 1
UBE3D-204ENST00000430071 NBPF9Q3BBW0 867 aa21.32■■□□□ 1
UBE3D-204ENST00000430071 RABL6Q3YEC7 729 aaPredicted RBP21.32■■□□□ 1
UBE3D-204ENST00000430071 STRIP1Q5VSL9 837 aa21.32■■□□□ 1
UBE3D-204ENST00000430071 ANGEL2Q5VTE6 544 aaKnown RBP21.32■■□□□ 1
UBE3D-204ENST00000430071 KLHDC4Q8TBB5 520 aa21.32■■□□□ 1
UBE3D-204ENST00000430071 DCPSQ96C86 337 aaKnown RBP21.32■■□□□ 1
UBE3D-204ENST00000430071 WBP1LQ9NX94 342 aa21.32■■□□□ 1
UBE3D-204ENST00000430071 NOB1Q9ULX3 412 aaKnown RBP21.32■■□□□ 1
UBE3D-204ENST00000430071 LRRC24Q50LG9 513 aa21.31■■□□□ 1
UBE3D-204ENST00000430071 C15orf52Q6ZUT6 534 aaKnown RBP21.31■■□□□ 1
UBE3D-204ENST00000430071 CERS5Q8N5B7 392 aa21.31■■□□□ 1
UBE3D-204ENST00000430071 JAG2Q9Y219 1238 aa21.31■■□□□ 1
UBE3D-204ENST00000430071 RIPOR2Q9Y4F9 1068 aa21.31■■□□□ 1
UBE3D-204ENST00000430071 CASP8AP2Q9UKL3 1982 aa21.29■■□□□ 1
UBE3D-204ENST00000430071 KIAA0825Q8IV33 1275 aa21.29■■□□□ 1
UBE3D-204ENST00000430071 ZIC5Q96T25 663 aa21.29■■□□□ 1
UBE3D-204ENST00000430071 PCDHAC2Q9Y5I4 1007 aa21.29■■□□□ 1
UBE3D-204ENST00000430071 MYH13Q9UKX3 1938 aa21.29■■□□□ 1
UBE3D-204ENST00000430071 PRAMEF18Q5VWM3 479 aa21.28■■□□□ 1
UBE3D-204ENST00000430071 TNNQ9UQP3 1299 aa21.28■■□□□ 1
UBE3D-204ENST00000430071 KIF16BQ96L93 1317 aa21.27■■□□□ 1
UBE3D-204ENST00000430071 WNT10BO00744 389 aa21.27■■□□□ 1
UBE3D-204ENST00000430071 SASH1O94885 1247 aa21.27■■□□□ 1
UBE3D-204ENST00000430071 CDCA5Q96FF9 252 aa21.27■■□□□ 1
UBE3D-204ENST00000430071 RCAN3Q9UKA8 241 aa21.27■■□□□ 1
UBE3D-204ENST00000430071 IL1R1P14778 569 aa21.26■□□□□ 0.99
UBE3D-204ENST00000430071 GYG1P46976 350 aa21.26■□□□□ 0.99
UBE3D-204ENST00000430071 HUNKP57058 714 aa21.26■□□□□ 0.99
UBE3D-204ENST00000430071 SULF1Q8IWU6 871 aa21.26■□□□□ 0.99
UBE3D-204ENST00000430071 GBA2Q9HCG7 927 aaPredicted RBP21.26■□□□□ 0.99
UBE3D-204ENST00000430071 ARAP2Q8WZ64 1704 aa21.26■□□□□ 0.99
UBE3D-204ENST00000430071 RFX5P48382 616 aaPredicted RBP21.25■□□□□ 0.99
UBE3D-204ENST00000430071 AKAP11Q9UKA4 1901 aa21.25■□□□□ 0.99
UBE3D-204ENST00000430071 AOX1Q06278 1338 aa21.25■□□□□ 0.99
UBE3D-204ENST00000430071 MYO3BQ8WXR4 1341 aa21.25■□□□□ 0.99
UBE3D-204ENST00000430071 ECE1P42892 770 aa21.24■□□□□ 0.99
UBE3D-204ENST00000430071 ZNF804AQ7Z570 1209 aa21.24■□□□□ 0.99
UBE3D-204ENST00000430071 FRAT1Q92837 279 aaPredicted RBP21.24■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 370.2 ms