RNA–Protein interactions for RNA: ENST00000429940.6

LINC00839-202, long intergenic non-protein coding RNA 839, humanhuman

TSL 2 BASIC

Gene LINC00839, Length 2,253 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00839-202ENST00000429940 NSUN7Q8NE18 718 aaKnown RBP17.62■□□□□ 0.41
LINC00839-202ENST00000429940 RAPGEF4Q8WZA2 1011 aa17.62■□□□□ 0.41
LINC00839-202ENST00000429940 HMGB1P09429 215 aaKnown RBP17.61■□□□□ 0.41
LINC00839-202ENST00000429940 ANKRD13DQ6ZTN6 518 aa17.61■□□□□ 0.41
LINC00839-202ENST00000429940 STOX1Q6ZVD7 989 aa17.61■□□□□ 0.41
LINC00839-202ENST00000429940 LRRC8AQ8IWT6 810 aa17.61■□□□□ 0.41
LINC00839-202ENST00000429940 CCDC112Q8NEF3 446 aa17.61■□□□□ 0.41
LINC00839-202ENST00000429940 MRFAP1L1Q96HT8 127 aa17.61■□□□□ 0.41
LINC00839-202ENST00000429940 FTOQ9C0B1 505 aaKnown RBP eCLIP17.61■□□□□ 0.41
LINC00839-202ENST00000429940 RCOR1Q9UKL0 485 aa17.61■□□□□ 0.41
LINC00839-202ENST00000429940 CCDC73Q6ZRK6 1079 aa17.61■□□□□ 0.41
LINC00839-202ENST00000429940 UBE3BQ7Z3V4 1068 aa17.61■□□□□ 0.41
LINC00839-202ENST00000429940 GOLPH3LQ9H4A5 285 aa17.61■□□□□ 0.41
LINC00839-202ENST00000429940 MEGF6O75095 1541 aa17.61■□□□□ 0.41
LINC00839-202ENST00000429940 COL22A1Q8NFW1 1626 aaPredicted RBP17.61■□□□□ 0.41
LINC00839-202ENST00000429940 AFDNP55196 1824 aaKnown RBP17.6■□□□□ 0.41
LINC00839-202ENST00000429940 LAMA4Q16363 1823 aa17.6■□□□□ 0.41
LINC00839-202ENST00000429940 PTPDC1A2A3K4 754 aa17.6■□□□□ 0.41
LINC00839-202ENST00000429940 DHX32Q7L7V1 743 aaKnown RBP17.6■□□□□ 0.41
LINC00839-202ENST00000429940 SLC52A2Q9HAB3 445 aa17.6■□□□□ 0.41
LINC00839-202ENST00000429940 ZHX1Q9UKY1 873 aaPredicted RBP17.6■□□□□ 0.41
LINC00839-202ENST00000429940 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.6■□□□□ 0.41
LINC00839-202ENST00000429940 CTDNEP1O95476 244 aa17.6■□□□□ 0.41
LINC00839-202ENST00000429940 APOBRQ0VD83 1088 aa17.6■□□□□ 0.41
LINC00839-202ENST00000429940 GTPBP4Q9BZE4 634 aaKnown RBP17.6■□□□□ 0.41
LINC00839-202ENST00000429940 SH3TC1Q8TE82 1336 aa17.6■□□□□ 0.41
LINC00839-202ENST00000429940 BECN2A8MW95 431 aa17.59■□□□□ 0.41
LINC00839-202ENST00000429940 NEMFO60524 1076 aa17.59■□□□□ 0.41
LINC00839-202ENST00000429940 KINO60870 393 aaKnown RBP17.59■□□□□ 0.41
LINC00839-202ENST00000429940 RABL6Q3YEC7 729 aaPredicted RBP17.59■□□□□ 0.41
LINC00839-202ENST00000429940 CEP135Q66GS9 1140 aa17.59■□□□□ 0.41
LINC00839-202ENST00000429940 KBTBD3Q8NAB2 608 aa17.59■□□□□ 0.41
LINC00839-202ENST00000429940 ZNF396Q96N95 335 aaPredicted RBP17.59■□□□□ 0.41
LINC00839-202ENST00000429940 CCDC9Q9Y3X0 531 aaKnown RBP17.59■□□□□ 0.41
LINC00839-202ENST00000429940 SNW1Q13573 536 aaKnown RBP17.59■□□□□ 0.41
LINC00839-202ENST00000429940 NFATC2IPQ8NCF5 419 aa17.59■□□□□ 0.41
LINC00839-202ENST00000429940 USP28Q96RU2 1077 aa17.59■□□□□ 0.41
LINC00839-202ENST00000429940 FEZ1Q99689 392 aa17.59■□□□□ 0.41
LINC00839-202ENST00000429940 PIP4K2AP48426 406 aaPredicted RBP17.58■□□□□ 0.4
LINC00839-202ENST00000429940 CCT2P78371 535 aaKnown RBP17.58■□□□□ 0.4
LINC00839-202ENST00000429940 ARID5BQ14865 1188 aa17.58■□□□□ 0.4
LINC00839-202ENST00000429940 ZNF592Q92610 1267 aa17.58■□□□□ 0.4
LINC00839-202ENST00000429940 KDM6AO15550 1401 aaPredicted RBP17.58■□□□□ 0.4
LINC00839-202ENST00000429940 SCN11AQ9UI33 1791 aa17.58■□□□□ 0.4
LINC00839-202ENST00000429940 TATP17735 454 aaPredicted RBP17.58■□□□□ 0.4
LINC00839-202ENST00000429940 FAM160A1Q05DH4 1040 aa17.58■□□□□ 0.4
LINC00839-202ENST00000429940 ATL3Q6DD88 541 aa17.58■□□□□ 0.4
LINC00839-202ENST00000429940 ZNF496Q96IT1 587 aaPredicted RBP17.58■□□□□ 0.4
LINC00839-202ENST00000429940 ME1P48163 572 aa17.57■□□□□ 0.4
LINC00839-202ENST00000429940 RBM6P78332 1123 aaKnown RBP17.57■□□□□ 0.4
LINC00839-202ENST00000429940 DHX40Q8IX18 779 aaKnown RBP17.57■□□□□ 0.4
LINC00839-202ENST00000429940 ANO10Q9NW15 660 aa17.57■□□□□ 0.4
LINC00839-202ENST00000429940 NAP1L2Q9ULW6 460 aaPredicted RBP17.57■□□□□ 0.4
LINC00839-202ENST00000429940 PALLDQ8WX93 1383 aa17.57■□□□□ 0.4
LINC00839-202ENST00000429940 A0A087WZG4 1122 aa17.56■□□□□ 0.4
LINC00839-202ENST00000429940 SKILP12757 684 aa17.56■□□□□ 0.4
LINC00839-202ENST00000429940 LRP10Q7Z4F1 713 aa17.56■□□□□ 0.4
LINC00839-202ENST00000429940 ENGASEQ8NFI3 743 aa17.56■□□□□ 0.4
LINC00839-202ENST00000429940 NCOA5Q9HCD5 579 aaKnown RBP17.56■□□□□ 0.4
LINC00839-202ENST00000429940 USP16Q9Y5T5 823 aa17.56■□□□□ 0.4
LINC00839-202ENST00000429940 A0A087WWV3 80 aa17.56■□□□□ 0.4
LINC00839-202ENST00000429940 USP27XA6NNY8 438 aa17.56■□□□□ 0.4
LINC00839-202ENST00000429940 ATP5J2-PTCD1G3V325 749 aa17.56■□□□□ 0.4
LINC00839-202ENST00000429940 GOLIM4O00461 696 aa17.56■□□□□ 0.4
LINC00839-202ENST00000429940 PTCD1O75127 700 aaKnown RBP17.56■□□□□ 0.4
LINC00839-202ENST00000429940 EXOSC10Q01780 885 aaKnown RBP17.56■□□□□ 0.4
LINC00839-202ENST00000429940 NAA30Q147X3 362 aaPredicted RBP17.56■□□□□ 0.4
LINC00839-202ENST00000429940 FSIP1Q8NA03 581 aa17.56■□□□□ 0.4
LINC00839-202ENST00000429940 C8orf37Q96NL8 207 aa17.56■□□□□ 0.4
LINC00839-202ENST00000429940 DSCC1Q9BVC3 393 aa17.56■□□□□ 0.4
LINC00839-202ENST00000429940 HELLSQ9NRZ9 838 aa17.56■□□□□ 0.4
LINC00839-202ENST00000429940 CGNQ9P2M7 1197 aaKnown RBP17.56■□□□□ 0.4
LINC00839-202ENST00000429940 ABCC6O95255 1503 aa17.56■□□□□ 0.4
LINC00839-202ENST00000429940 CCDC69A6NI79 296 aa17.55■□□□□ 0.4
LINC00839-202ENST00000429940 GUCY1B3Q02153 619 aa17.55■□□□□ 0.4
LINC00839-202ENST00000429940 SLFNL1Q499Z3 407 aa17.55■□□□□ 0.4
LINC00839-202ENST00000429940 FILIP1Q7Z7B0 1213 aa17.55■□□□□ 0.4
LINC00839-202ENST00000429940 CEP57L1Q8IYX8 460 aa17.55■□□□□ 0.4
LINC00839-202ENST00000429940 CARD10Q9BWT7 1032 aa17.55■□□□□ 0.4
LINC00839-202ENST00000429940 AGXT2Q9BYV1 514 aa17.55■□□□□ 0.4
LINC00839-202ENST00000429940 PAG1Q9NWQ8 432 aa17.55■□□□□ 0.4
LINC00839-202ENST00000429940 OGFRQ9NZT2 677 aa17.55■□□□□ 0.4
LINC00839-202ENST00000429940 ARFGEF2Q9Y6D5 1785 aa17.55■□□□□ 0.4
LINC00839-202ENST00000429940 SALL1Q9NSC2 1324 aa17.55■□□□□ 0.4
LINC00839-202ENST00000429940 E7EWF7 191 aa17.55■□□□□ 0.4
LINC00839-202ENST00000429940 CYP27B1O15528 508 aa17.55■□□□□ 0.4
LINC00839-202ENST00000429940 PPFIA3O75145 1194 aa17.55■□□□□ 0.4
LINC00839-202ENST00000429940 SNRPA1P09661 255 aaKnown RBP17.55■□□□□ 0.4
LINC00839-202ENST00000429940 PTPN14Q15678 1187 aa17.55■□□□□ 0.4
LINC00839-202ENST00000429940 CTNNA3Q9UI47 895 aa17.55■□□□□ 0.4
LINC00839-202ENST00000429940 PHKG2P15735 406 aa17.54■□□□□ 0.4
LINC00839-202ENST00000429940 TTC5Q8N0Z6 440 aa17.54■□□□□ 0.4
LINC00839-202ENST00000429940 AOPEPQ8N6M6 819 aa17.54■□□□□ 0.4
LINC00839-202ENST00000429940 NEUROD6Q96NK8 337 aa17.54■□□□□ 0.4
LINC00839-202ENST00000429940 NAT10Q9H0A0 1025 aaKnown RBP17.54■□□□□ 0.4
LINC00839-202ENST00000429940 CCZ1BP86790 482 aa17.54■□□□□ 0.4
LINC00839-202ENST00000429940 CCZ1P86791 482 aaPredicted RBP17.54■□□□□ 0.4
LINC00839-202ENST00000429940 LMBR1LQ6UX01 489 aa17.54■□□□□ 0.4
LINC00839-202ENST00000429940 NYAP1Q6ZVC0 841 aa17.54■□□□□ 0.4
LINC00839-202ENST00000429940 ILDR1Q86SU0 546 aaPredicted RBP17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms