RNA–Protein interactions for RNA: ENST00000428982.4

SYNGAP1-203, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 4,339 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-203ENST00000428982 CEP89Q96ST8 783 aa16.66■□□□□ 0.26
SYNGAP1-203ENST00000428982 VEZTQ9HBM0 779 aa16.66■□□□□ 0.26
SYNGAP1-203ENST00000428982 A0A1B0GUA9 196 aa16.66■□□□□ 0.26
SYNGAP1-203ENST00000428982 KRT85P78386 507 aa16.66■□□□□ 0.26
SYNGAP1-203ENST00000428982 MCM6Q14566 821 aa16.66■□□□□ 0.26
SYNGAP1-203ENST00000428982 CAMK4Q16566 473 aa16.66■□□□□ 0.26
SYNGAP1-203ENST00000428982 BRD1O95696 1058 aa16.65■□□□□ 0.26
SYNGAP1-203ENST00000428982 STARD3NLO95772 234 aa16.65■□□□□ 0.26
SYNGAP1-203ENST00000428982 KCNF1Q9H3M0 494 aa16.65■□□□□ 0.26
SYNGAP1-203ENST00000428982 BICD2Q8TD16 824 aa16.65■□□□□ 0.26
SYNGAP1-203ENST00000428982 UPF3BQ9BZI7 483 aaKnown RBP16.65■□□□□ 0.26
SYNGAP1-203ENST00000428982 HYPKQ9NX55 129 aa16.65■□□□□ 0.26
SYNGAP1-203ENST00000428982 EIF5P55010 431 aaKnown RBP16.65■□□□□ 0.26
SYNGAP1-203ENST00000428982 NUCKS1Q9H1E3 243 aaKnown RBP16.65■□□□□ 0.26
SYNGAP1-203ENST00000428982 NRXN3Q9Y4C0 1643 aa16.65■□□□□ 0.26
SYNGAP1-203ENST00000428982 SRGAP3O43295 1099 aa16.64■□□□□ 0.26
SYNGAP1-203ENST00000428982 PACS2Q86VP3 889 aa16.64■□□□□ 0.26
SYNGAP1-203ENST00000428982 ZCCHC17Q9NP64 241 aaKnown RBP16.64■□□□□ 0.26
SYNGAP1-203ENST00000428982 ANKRD65E5RJM6 399 aa16.64■□□□□ 0.25
SYNGAP1-203ENST00000428982 SNRPA1P09661 255 aaKnown RBP16.64■□□□□ 0.25
SYNGAP1-203ENST00000428982 DDB1Q16531 1140 aa16.64■□□□□ 0.25
SYNGAP1-203ENST00000428982 NBPF11Q86T75 865 aa16.64■□□□□ 0.25
SYNGAP1-203ENST00000428982 NFATC2IPQ8NCF5 419 aa16.64■□□□□ 0.25
SYNGAP1-203ENST00000428982 A0A087WUV0 522 aaPredicted RBP16.64■□□□□ 0.25
SYNGAP1-203ENST00000428982 KRT24Q2M2I5 525 aa16.64■□□□□ 0.25
SYNGAP1-203ENST00000428982 OTUD7AQ8TE49 926 aaPredicted RBP16.64■□□□□ 0.25
SYNGAP1-203ENST00000428982 ZSCAN22P10073 491 aaPredicted RBP16.64■□□□□ 0.25
SYNGAP1-203ENST00000428982 FAM177A1Q8N128 213 aaPredicted RBP16.64■□□□□ 0.25
SYNGAP1-203ENST00000428982 H3BQV1 296 aa16.63■□□□□ 0.25
SYNGAP1-203ENST00000428982 SLC39A6Q13433 755 aa16.63■□□□□ 0.25
SYNGAP1-203ENST00000428982 IFFO2Q5TF58 517 aa16.63■□□□□ 0.25
SYNGAP1-203ENST00000428982 LUZP1Q86V48 1076 aa16.63■□□□□ 0.25
SYNGAP1-203ENST00000428982 CDCA7Q9BWT1 371 aaPredicted RBP16.63■□□□□ 0.25
SYNGAP1-203ENST00000428982 SRRTQ9BXP5 876 aaKnown RBP16.63■□□□□ 0.25
SYNGAP1-203ENST00000428982 LGR6Q9HBX8 967 aa16.63■□□□□ 0.25
SYNGAP1-203ENST00000428982 ATP8B1O43520 1251 aa16.63■□□□□ 0.25
SYNGAP1-203ENST00000428982 STX6O43752 255 aa16.63■□□□□ 0.25
SYNGAP1-203ENST00000428982 IL1RAPL2Q9NP60 686 aa16.63■□□□□ 0.25
SYNGAP1-203ENST00000428982 KIF20BQ96Q89 1820 aa16.62■□□□□ 0.25
SYNGAP1-203ENST00000428982 SHTN1A0MZ66 631 aa16.62■□□□□ 0.25
SYNGAP1-203ENST00000428982 ADAM21Q9UKJ8 722 aa16.62■□□□□ 0.25
SYNGAP1-203ENST00000428982 CNPY2Q9Y2B0 182 aa16.62■□□□□ 0.25
SYNGAP1-203ENST00000428982 KAT6BQ8WYB5 2073 aa16.62■□□□□ 0.25
SYNGAP1-203ENST00000428982 ANKRD18AQ8IVF6 992 aa16.62■□□□□ 0.25
SYNGAP1-203ENST00000428982 SPATS2LQ9NUQ6 558 aaKnown RBP16.62■□□□□ 0.25
SYNGAP1-203ENST00000428982 IRAK4Q9NWZ3 460 aa16.62■□□□□ 0.25
SYNGAP1-203ENST00000428982 ELP1O95163 1332 aa16.62■□□□□ 0.25
SYNGAP1-203ENST00000428982 NEDD9Q14511 834 aa16.62■□□□□ 0.25
SYNGAP1-203ENST00000428982 NBPF9Q3BBW0 867 aa16.62■□□□□ 0.25
SYNGAP1-203ENST00000428982 CKAP2LQ8IYA6 745 aa16.62■□□□□ 0.25
SYNGAP1-203ENST00000428982 JPH2Q9BR39 696 aaPredicted RBP16.62■□□□□ 0.25
SYNGAP1-203ENST00000428982 EBAG9O00559 213 aa16.61■□□□□ 0.25
SYNGAP1-203ENST00000428982 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.61■□□□□ 0.25
SYNGAP1-203ENST00000428982 TADA2BQ86TJ2 420 aa16.61■□□□□ 0.25
SYNGAP1-203ENST00000428982 TEX13AQ9BXU3 409 aaPredicted RBP16.61■□□□□ 0.25
SYNGAP1-203ENST00000428982 DNAI1Q9UI46 699 aa16.61■□□□□ 0.25
SYNGAP1-203ENST00000428982 CUL4AQ13619 759 aa16.61■□□□□ 0.25
SYNGAP1-203ENST00000428982 LARP1Q6PKG0 1096 aaKnown RBP16.61■□□□□ 0.25
SYNGAP1-203ENST00000428982 ZNF165P49910 485 aa16.61■□□□□ 0.25
SYNGAP1-203ENST00000428982 LIG3P49916 1009 aa16.61■□□□□ 0.25
SYNGAP1-203ENST00000428982 WDR17Q8IZU2 1322 aa16.61■□□□□ 0.25
SYNGAP1-203ENST00000428982 CLNS1AP54105 237 aaKnown RBP16.61■□□□□ 0.25
SYNGAP1-203ENST00000428982 JAKMIP3Q5VZ66 844 aa16.61■□□□□ 0.25
SYNGAP1-203ENST00000428982 NUTM1Q86Y26 1132 aa16.61■□□□□ 0.25
SYNGAP1-203ENST00000428982 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.61■□□□□ 0.25
SYNGAP1-203ENST00000428982 SEC31AO94979 1220 aaKnown RBP16.6■□□□□ 0.25
SYNGAP1-203ENST00000428982 CYP2E1P05181 493 aaPredicted RBP16.6■□□□□ 0.25
SYNGAP1-203ENST00000428982 GCKP35557 465 aa16.6■□□□□ 0.25
SYNGAP1-203ENST00000428982 IL17REQ8NFR9 667 aa16.6■□□□□ 0.25
SYNGAP1-203ENST00000428982 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.6■□□□□ 0.251e-6■■■■□ 24.9
SYNGAP1-203ENST00000428982 MST1RQ04912 1400 aa16.6■□□□□ 0.25
SYNGAP1-203ENST00000428982 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.6■□□□□ 0.25
SYNGAP1-203ENST00000428982 JAKMIP1Q96N16 626 aaKnown RBP16.6■□□□□ 0.25
SYNGAP1-203ENST00000428982 STAP2Q9UGK3 403 aa16.6■□□□□ 0.25
SYNGAP1-203ENST00000428982 CCDC69A6NI79 296 aa16.6■□□□□ 0.25
SYNGAP1-203ENST00000428982 ERCC3P19447 782 aa16.6■□□□□ 0.25
SYNGAP1-203ENST00000428982 EVCP57679 992 aa16.6■□□□□ 0.25
SYNGAP1-203ENST00000428982 NAA25Q14CX7 972 aa16.6■□□□□ 0.25
SYNGAP1-203ENST00000428982 ZNF513Q8N8E2 541 aaPredicted RBP16.6■□□□□ 0.25
SYNGAP1-203ENST00000428982 RHPN1Q8TCX5 695 aa16.6■□□□□ 0.25
SYNGAP1-203ENST00000428982 PIK3R5Q8WYR1 880 aa16.6■□□□□ 0.25
SYNGAP1-203ENST00000428982 SGSM3Q96HU1 749 aa16.6■□□□□ 0.25
SYNGAP1-203ENST00000428982 ZNF446Q9NWS9 450 aa16.6■□□□□ 0.25
SYNGAP1-203ENST00000428982 KRT32Q14532 448 aa16.59■□□□□ 0.25
SYNGAP1-203ENST00000428982 KIAA1328Q86T90 577 aa16.59■□□□□ 0.25
SYNGAP1-203ENST00000428982 TTC41PQ6P2S7 1318 aa16.59■□□□□ 0.25
SYNGAP1-203ENST00000428982 TTC36A6NLP5 189 aa16.59■□□□□ 0.25
SYNGAP1-203ENST00000428982 IPO7O95373 1038 aaKnown RBP16.59■□□□□ 0.25
SYNGAP1-203ENST00000428982 GBP2P32456 591 aaPredicted RBP16.59■□□□□ 0.25
SYNGAP1-203ENST00000428982 IRX1P78414 480 aaPredicted RBP16.59■□□□□ 0.25
SYNGAP1-203ENST00000428982 ANO6Q4KMQ2 910 aa16.59■□□□□ 0.25
SYNGAP1-203ENST00000428982 LARP1BQ659C4 914 aaKnown RBP16.59■□□□□ 0.25
SYNGAP1-203ENST00000428982 ZNF75DP51815 510 aa16.59■□□□□ 0.25
SYNGAP1-203ENST00000428982 DHX8Q14562 1220 aaKnown RBP16.59■□□□□ 0.25
SYNGAP1-203ENST00000428982 RBBP5Q15291 538 aaKnown RBP16.59■□□□□ 0.25
SYNGAP1-203ENST00000428982 SUGP1Q8IWZ8 645 aaKnown RBP16.59■□□□□ 0.25
SYNGAP1-203ENST00000428982 SCAND2PQ9GZW5 306 aaPredicted RBP16.59■□□□□ 0.25
SYNGAP1-203ENST00000428982 CHPF2Q9P2E5 772 aa16.59■□□□□ 0.25
SYNGAP1-203ENST00000428982 TUBB4AP04350 444 aa16.59■□□□□ 0.25
SYNGAP1-203ENST00000428982 SFPQP23246 707 aaKnown RBP eCLIP16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms