RNA–Protein interactions for RNA: ENST00000428848.7

CDH13-202, Transcript of cadherin 13, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CDH13, Length 2,195 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-202ENST00000428848 NAA16Q6N069 864 aaPredicted RBP10.35□□□□□ -0.75
CDH13-202ENST00000428848 MRFAP1L1Q96HT8 127 aa10.35□□□□□ -0.75
CDH13-202ENST00000428848 CTNNA3Q9UI47 895 aa10.35□□□□□ -0.75
CDH13-202ENST00000428848 SLFN14P0C7P3 912 aa10.35□□□□□ -0.75
CDH13-202ENST00000428848 MCMDC2Q4G0Z9 681 aa10.35□□□□□ -0.75
CDH13-202ENST00000428848 STOX1Q6ZVD7 989 aa10.35□□□□□ -0.75
CDH13-202ENST00000428848 NSUN7Q8NE18 718 aaKnown RBP10.35□□□□□ -0.75
CDH13-202ENST00000428848 DNAJC2Q99543 621 aaKnown RBP10.35□□□□□ -0.75
CDH13-202ENST00000428848 HAUS7Q99871 368 aa10.35□□□□□ -0.75
CDH13-202ENST00000428848 CLIP2Q9UDT6 1046 aa10.35□□□□□ -0.75
CDH13-202ENST00000428848 DDX41Q9UJV9 622 aaKnown RBP10.35□□□□□ -0.75
CDH13-202ENST00000428848 ARFGEF2Q9Y6D5 1785 aa10.35□□□□□ -0.75
CDH13-202ENST00000428848 SH3TC1Q8TE82 1336 aa10.35□□□□□ -0.75
CDH13-202ENST00000428848 CTDNEP1O95476 244 aa10.34□□□□□ -0.75
CDH13-202ENST00000428848 TNNT1P13805 278 aa10.34□□□□□ -0.75
CDH13-202ENST00000428848 TFCP2Q12800 502 aa10.34□□□□□ -0.75
CDH13-202ENST00000428848 SNW1Q13573 536 aaKnown RBP10.34□□□□□ -0.75
CDH13-202ENST00000428848 C11orf57Q6ZUT1 292 aaPredicted RBP10.34□□□□□ -0.75
CDH13-202ENST00000428848 DRC7Q8IY82 874 aa10.34□□□□□ -0.75
CDH13-202ENST00000428848 ENGASEQ8NFI3 743 aa10.34□□□□□ -0.75
CDH13-202ENST00000428848 XAGE3Q8WTP9 111 aa10.34□□□□□ -0.75
CDH13-202ENST00000428848 DDX11Q96FC9 970 aa10.34□□□□□ -0.75
CDH13-202ENST00000428848 SEC62Q99442 399 aaKnown RBP10.34□□□□□ -0.75
CDH13-202ENST00000428848 PAXBP1Q9Y5B6 917 aa10.34□□□□□ -0.75
CDH13-202ENST00000428848 MORC2Q9Y6X9 1032 aaPredicted RBP10.34□□□□□ -0.75
CDH13-202ENST00000428848 SALL1Q9NSC2 1324 aa10.34□□□□□ -0.75
CDH13-202ENST00000428848 KDM6AO15550 1401 aaPredicted RBP10.34□□□□□ -0.75
CDH13-202ENST00000428848 CHGBP05060 677 aa10.33□□□□□ -0.76
CDH13-202ENST00000428848 SNRPA1P09661 255 aaKnown RBP10.33□□□□□ -0.76
CDH13-202ENST00000428848 IRX5P78411 483 aaPredicted RBP10.33□□□□□ -0.76
CDH13-202ENST00000428848 EXOSC10Q01780 885 aaKnown RBP10.33□□□□□ -0.76
CDH13-202ENST00000428848 ATL3Q6DD88 541 aa10.33□□□□□ -0.76
CDH13-202ENST00000428848 CCDC129Q6ZRS4 1044 aa10.33□□□□□ -0.76
CDH13-202ENST00000428848 COPS6Q7L5N1 327 aa10.33□□□□□ -0.76
CDH13-202ENST00000428848 TICAM2Q86XR7 235 aa10.33□□□□□ -0.76
CDH13-202ENST00000428848 LRRC8AQ8IWT6 810 aa10.33□□□□□ -0.76
CDH13-202ENST00000428848 C16orf45Q96MC5 204 aaPredicted RBP10.33□□□□□ -0.76
CDH13-202ENST00000428848 FMNL2Q96PY5 1086 aa10.33□□□□□ -0.76
CDH13-202ENST00000428848 MYD88Q99836 296 aa10.33□□□□□ -0.76
CDH13-202ENST00000428848 PALLDQ8WX93 1383 aa10.33□□□□□ -0.76
CDH13-202ENST00000428848 H3BQV1 296 aa10.33□□□□□ -0.76
CDH13-202ENST00000428848 NEMFO60524 1076 aa10.33□□□□□ -0.76
CDH13-202ENST00000428848 HMGB1P09429 215 aaKnown RBP10.33□□□□□ -0.76
CDH13-202ENST00000428848 CASP7P55210 303 aa10.33□□□□□ -0.76
CDH13-202ENST00000428848 STX1AQ16623 288 aa10.33□□□□□ -0.76
CDH13-202ENST00000428848 IFFO2Q5TF58 517 aa10.33□□□□□ -0.76
CDH13-202ENST00000428848 DHX32Q7L7V1 743 aaKnown RBP10.33□□□□□ -0.76
CDH13-202ENST00000428848 DHX37Q8IY37 1157 aaKnown RBP10.33□□□□□ -0.76
CDH13-202ENST00000428848 TIGD1Q96MW7 591 aa10.33□□□□□ -0.76
CDH13-202ENST00000428848 TSPYL1Q9H0U9 437 aa10.33□□□□□ -0.76
CDH13-202ENST00000428848 GOLPH3LQ9H4A5 285 aa10.33□□□□□ -0.76
CDH13-202ENST00000428848 KCND1Q9NSA2 647 aa10.33□□□□□ -0.76
CDH13-202ENST00000428848 SLC39A6Q13433 755 aa10.32□□□□□ -0.76
CDH13-202ENST00000428848 NYAP1Q6ZVC0 841 aa10.32□□□□□ -0.76
CDH13-202ENST00000428848 CCAR1Q8IX12 1150 aaKnown RBP10.32□□□□□ -0.76
CDH13-202ENST00000428848 DHX40Q8IX18 779 aaKnown RBP10.32□□□□□ -0.76
CDH13-202ENST00000428848 KBTBD3Q8NAB2 608 aa10.32□□□□□ -0.76
CDH13-202ENST00000428848 USP28Q96RU2 1077 aa10.32□□□□□ -0.76
CDH13-202ENST00000428848 DBNDD2Q9BQY9 259 aa10.32□□□□□ -0.76
CDH13-202ENST00000428848 NDUFB9Q9Y6M9 179 aa10.32□□□□□ -0.76
CDH13-202ENST00000428848 PKD1L3Q7Z443 1732 aa10.32□□□□□ -0.76
CDH13-202ENST00000428848 CABP4P57796 275 aa10.32□□□□□ -0.76
CDH13-202ENST00000428848 TERF2Q15554 542 aa10.32□□□□□ -0.76
CDH13-202ENST00000428848 ANKRD13DQ6ZTN6 518 aa10.32□□□□□ -0.76
CDH13-202ENST00000428848 DSCC1Q9BVC3 393 aa10.32□□□□□ -0.76
CDH13-202ENST00000428848 CALCOCO1Q9P1Z2 691 aa10.32□□□□□ -0.76
CDH13-202ENST00000428848 SPEF2Q9C093 1822 aa10.31□□□□□ -0.76
CDH13-202ENST00000428848 GLI3P10071 1580 aa10.31□□□□□ -0.76
CDH13-202ENST00000428848 PCDH11XQ9BZA7 1347 aa10.31□□□□□ -0.76
CDH13-202ENST00000428848 PCDH11YQ9BZA8 1340 aa10.31□□□□□ -0.76
CDH13-202ENST00000428848 IGSF3O75054 1194 aa10.31□□□□□ -0.76
CDH13-202ENST00000428848 HSP90B1P14625 803 aaKnown RBP10.31□□□□□ -0.76
CDH13-202ENST00000428848 CCZ1BP86790 482 aa10.31□□□□□ -0.76
CDH13-202ENST00000428848 CCZ1P86791 482 aaPredicted RBP10.31□□□□□ -0.76
CDH13-202ENST00000428848 FBXL16Q8N461 479 aa10.31□□□□□ -0.76
CDH13-202ENST00000428848 NFATC2IPQ8NCF5 419 aa10.31□□□□□ -0.76
CDH13-202ENST00000428848 LRRC2Q9BYS8 371 aa10.31□□□□□ -0.76
CDH13-202ENST00000428848 PRDM11Q9NQV5 511 aa10.31□□□□□ -0.76
CDH13-202ENST00000428848 HELLSQ9NRZ9 838 aa10.31□□□□□ -0.76
CDH13-202ENST00000428848 PARP4Q9UKK3 1724 aaKnown RBP10.31□□□□□ -0.76
CDH13-202ENST00000428848 PTPDC1A2A3K4 754 aa10.31□□□□□ -0.76
CDH13-202ENST00000428848 GOLGA6L19H0YKK7 550 aa10.31□□□□□ -0.76
CDH13-202ENST00000428848 MYL6BP14649 208 aa10.31□□□□□ -0.76
CDH13-202ENST00000428848 FAM160A1Q05DH4 1040 aa10.31□□□□□ -0.76
CDH13-202ENST00000428848 ARID5BQ14865 1188 aa10.31□□□□□ -0.76
CDH13-202ENST00000428848 TPD52L1Q16890 204 aaPredicted RBP10.31□□□□□ -0.76
CDH13-202ENST00000428848 BRINP3Q76B58 766 aa10.31□□□□□ -0.76
CDH13-202ENST00000428848 KRT222Q8N1A0 295 aa10.31□□□□□ -0.76
CDH13-202ENST00000428848 FTOQ9C0B1 505 aaKnown RBP eCLIP10.31□□□□□ -0.76
CDH13-202ENST00000428848 WDR17Q8IZU2 1322 aa10.3□□□□□ -0.76
CDH13-202ENST00000428848 TULP2O00295 520 aa10.3□□□□□ -0.76
CDH13-202ENST00000428848 EVCP57679 992 aa10.3□□□□□ -0.76
CDH13-202ENST00000428848 CEP135Q66GS9 1140 aa10.3□□□□□ -0.76
CDH13-202ENST00000428848 POTEAQ6S8J7 498 aa10.3□□□□□ -0.76
CDH13-202ENST00000428848 CCDC112Q8NEF3 446 aa10.3□□□□□ -0.76
CDH13-202ENST00000428848 KIF18AQ8NI77 898 aa10.3□□□□□ -0.76
CDH13-202ENST00000428848 ZNF274Q96GC6 653 aaPredicted RBP10.3□□□□□ -0.76
CDH13-202ENST00000428848 ZNF496Q96IT1 587 aaPredicted RBP10.3□□□□□ -0.76
CDH13-202ENST00000428848 ZNF396Q96N95 335 aaPredicted RBP10.3□□□□□ -0.76
CDH13-202ENST00000428848 GPR108Q9NPR9 543 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms