RNA–Protein interactions for RNA: ENST00000428842.1

HMGCLL1-206, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 1 (best) BASIC

Gene HMGCLL1, Length 2,437 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-206ENST00000428842 RASGRF1Q13972 1273 aa11.63□□□□□ -0.55
HMGCLL1-206ENST00000428842 PUM3Q15397 648 aaKnown RBP11.63□□□□□ -0.55
HMGCLL1-206ENST00000428842 GRIK5Q16478 980 aa11.63□□□□□ -0.55
HMGCLL1-206ENST00000428842 MASTLQ96GX5 879 aa11.63□□□□□ -0.55
HMGCLL1-206ENST00000428842 FAM227BQ96M60 508 aa11.63□□□□□ -0.55
HMGCLL1-206ENST00000428842 LRP5O75197 1615 aa11.63□□□□□ -0.55
HMGCLL1-206ENST00000428842 CHD4Q14839 1912 aa11.63□□□□□ -0.55
HMGCLL1-206ENST00000428842 NPR1P16066 1061 aa11.62□□□□□ -0.55
HMGCLL1-206ENST00000428842 POLD1P28340 1107 aa11.62□□□□□ -0.55
HMGCLL1-206ENST00000428842 MFAP1P55081 439 aaKnown RBP11.62□□□□□ -0.55
HMGCLL1-206ENST00000428842 CHAF1AQ13111 956 aaPredicted RBP11.62□□□□□ -0.55
HMGCLL1-206ENST00000428842 FAM84BQ96KN1 310 aaPredicted RBP11.62□□□□□ -0.55
HMGCLL1-206ENST00000428842 IPO9Q96P70 1041 aaKnown RBP11.62□□□□□ -0.55
HMGCLL1-206ENST00000428842 ZNF804BA4D1E1 1349 aa11.62□□□□□ -0.55
HMGCLL1-206ENST00000428842 MROH5Q6ZUA9 1318 aa11.62□□□□□ -0.55
HMGCLL1-206ENST00000428842 COL1A1P02452 1464 aaPredicted RBP11.62□□□□□ -0.55
HMGCLL1-206ENST00000428842 HOXA10P31260 410 aaPredicted RBP11.62□□□□□ -0.55
HMGCLL1-206ENST00000428842 ANP32AP39687 249 aaKnown RBP11.62□□□□□ -0.55
HMGCLL1-206ENST00000428842 CENPFP49454 3210 aa11.62□□□□□ -0.55
HMGCLL1-206ENST00000428842 WASHC4Q2M389 1173 aa11.62□□□□□ -0.55
HMGCLL1-206ENST00000428842 TTC39AQ5SRH9 613 aa11.62□□□□□ -0.55
HMGCLL1-206ENST00000428842 CCDC129Q6ZRS4 1044 aa11.62□□□□□ -0.55
HMGCLL1-206ENST00000428842 BCS1LQ9Y276 419 aa11.62□□□□□ -0.55
HMGCLL1-206ENST00000428842 CEP350Q5VT06 3117 aa11.62□□□□□ -0.55
HMGCLL1-206ENST00000428842 RGL2O15211 777 aa11.61□□□□□ -0.55
HMGCLL1-206ENST00000428842 IFIT1P09914 478 aaKnown RBP11.61□□□□□ -0.55
HMGCLL1-206ENST00000428842 CWC27Q6UX04 472 aaKnown RBP11.61□□□□□ -0.55
HMGCLL1-206ENST00000428842 SLC16A10Q8TF71 515 aa11.61□□□□□ -0.55
HMGCLL1-206ENST00000428842 DBNDD1Q9H9R9 158 aa11.61□□□□□ -0.55
HMGCLL1-206ENST00000428842 STAP2Q9UGK3 403 aa11.61□□□□□ -0.55
HMGCLL1-206ENST00000428842 RTL9Q8NET4 1388 aa11.61□□□□□ -0.55
HMGCLL1-206ENST00000428842 AKAP11Q9UKA4 1901 aa11.61□□□□□ -0.55
HMGCLL1-206ENST00000428842 C10orf71Q711Q0 1435 aa11.61□□□□□ -0.55
HMGCLL1-206ENST00000428842 CYP2E1P05181 493 aaPredicted RBP11.61□□□□□ -0.55
HMGCLL1-206ENST00000428842 TBC1D16Q8TBP0 767 aa11.61□□□□□ -0.55
HMGCLL1-206ENST00000428842 LPIN2Q92539 896 aa11.61□□□□□ -0.55
HMGCLL1-206ENST00000428842 FBXW7Q969H0 707 aa11.61□□□□□ -0.55
HMGCLL1-206ENST00000428842 BACH2Q9BYV9 841 aa11.6□□□□□ -0.55
HMGCLL1-206ENST00000428842 PIH1D3Q9NQM4 214 aaKnown RBP11.6□□□□□ -0.55
HMGCLL1-206ENST00000428842 ZNF277Q9NRM2 450 aaPredicted RBP11.6□□□□□ -0.55
HMGCLL1-206ENST00000428842 HMG20BQ9P0W2 317 aa11.6□□□□□ -0.55
HMGCLL1-206ENST00000428842 AK9Q5TCS8 1911 aa11.6□□□□□ -0.55
HMGCLL1-206ENST00000428842 FRAT2O75474 233 aaPredicted RBP11.6□□□□□ -0.55
HMGCLL1-206ENST00000428842 AOC3Q16853 763 aa11.6□□□□□ -0.55
HMGCLL1-206ENST00000428842 BMP2KLQ5H9B9 411 aa11.6□□□□□ -0.55
HMGCLL1-206ENST00000428842 VPS37DQ86XT2 251 aa11.6□□□□□ -0.55
HMGCLL1-206ENST00000428842 ABCF2Q9UG63 623 aa11.6□□□□□ -0.55
HMGCLL1-206ENST00000428842 DUOX1Q9NRD9 1551 aa11.59□□□□□ -0.55
HMGCLL1-206ENST00000428842 COL9A3Q14050 684 aaPredicted RBP11.59□□□□□ -0.55
HMGCLL1-206ENST00000428842 CRAMP1Q96RY5 1269 aa11.59□□□□□ -0.55
HMGCLL1-206ENST00000428842 OSBPL3Q9H4L5 887 aa11.59□□□□□ -0.55
HMGCLL1-206ENST00000428842 ATP6V0A2Q9Y487 856 aa11.59□□□□□ -0.55
HMGCLL1-206ENST00000428842 A0A0D9SFI3 127 aa11.59□□□□□ -0.55
HMGCLL1-206ENST00000428842 SLC5A1P13866 664 aa11.59□□□□□ -0.55
HMGCLL1-206ENST00000428842 HSP90B1P14625 803 aaKnown RBP11.59□□□□□ -0.55
HMGCLL1-206ENST00000428842 PRELPP51888 382 aa11.59□□□□□ -0.55
HMGCLL1-206ENST00000428842 RASSF7Q02833 373 aa11.59□□□□□ -0.55
HMGCLL1-206ENST00000428842 DPP8Q6V1X1 898 aaPredicted RBP11.59□□□□□ -0.55
HMGCLL1-206ENST00000428842 C7orf43Q8WVR3 580 aa11.59□□□□□ -0.55
HMGCLL1-206ENST00000428842 FSD1Q9BTV5 496 aa11.59□□□□□ -0.55
HMGCLL1-206ENST00000428842 SPON1Q9HCB6 807 aa11.59□□□□□ -0.55
HMGCLL1-206ENST00000428842 AKAP2Q9Y2D5 859 aa11.59□□□□□ -0.55
HMGCLL1-206ENST00000428842 F8W031 263 aaPredicted RBP11.58□□□□□ -0.56
HMGCLL1-206ENST00000428842 IDH1O75874 414 aaKnown RBP11.58□□□□□ -0.56
HMGCLL1-206ENST00000428842 CCDC158Q5M9N0 1113 aa11.58□□□□□ -0.56
HMGCLL1-206ENST00000428842 MPNDQ8N594 471 aa11.58□□□□□ -0.56
HMGCLL1-206ENST00000428842 TTLL6Q8N841 843 aa11.58□□□□□ -0.56
HMGCLL1-206ENST00000428842 PAG1Q9NWQ8 432 aa11.58□□□□□ -0.56
HMGCLL1-206ENST00000428842 IRS2Q9Y4H2 1338 aa11.58□□□□□ -0.56
HMGCLL1-206ENST00000428842 COL4A5P29400 1685 aa11.58□□□□□ -0.56
HMGCLL1-206ENST00000428842 BBOX1O75936 387 aa11.58□□□□□ -0.56
HMGCLL1-206ENST00000428842 GLRX3O76003 335 aaKnown RBP11.58□□□□□ -0.56
HMGCLL1-206ENST00000428842 ATP5JP18859 108 aa11.58□□□□□ -0.56
HMGCLL1-206ENST00000428842 PRDX5P30044 214 aa11.58□□□□□ -0.56
HMGCLL1-206ENST00000428842 SLC4A8Q2Y0W8 1093 aa11.58□□□□□ -0.56
HMGCLL1-206ENST00000428842 ADGRA1Q86SQ6 560 aa11.58□□□□□ -0.56
HMGCLL1-206ENST00000428842 ZNF589Q86UQ0 364 aaPredicted RBP11.58□□□□□ -0.56
HMGCLL1-206ENST00000428842 RTN4Q9NQC3 1192 aaKnown RBP11.58□□□□□ -0.56
HMGCLL1-206ENST00000428842 GGA1Q9UJY5 639 aa11.58□□□□□ -0.56
HMGCLL1-206ENST00000428842 PCDHAC2Q9Y5I4 1007 aa11.58□□□□□ -0.56
HMGCLL1-206ENST00000428842 KIAA1551Q9HCM1 1747 aa11.58□□□□□ -0.56
HMGCLL1-206ENST00000428842 XDHP47989 1333 aa11.58□□□□□ -0.56
HMGCLL1-206ENST00000428842 ALDH1B1P30837 517 aa11.57□□□□□ -0.56
HMGCLL1-206ENST00000428842 SPATA5Q8NB90 893 aa11.57□□□□□ -0.56
HMGCLL1-206ENST00000428842 ZNF384Q8TF68 577 aa11.57□□□□□ -0.56
HMGCLL1-206ENST00000428842 SCN9AQ15858 1988 aa11.57□□□□□ -0.56
HMGCLL1-206ENST00000428842 SMIM22K7EJ46 135 aa11.57□□□□□ -0.56
HMGCLL1-206ENST00000428842 CHMLP26374 656 aa11.57□□□□□ -0.56
HMGCLL1-206ENST00000428842 NMIQ13287 307 aaPredicted RBP11.57□□□□□ -0.56
HMGCLL1-206ENST00000428842 HAUS7Q99871 368 aa11.57□□□□□ -0.56
HMGCLL1-206ENST00000428842 SCAF8Q9UPN6 1271 aaKnown RBP11.57□□□□□ -0.56
HMGCLL1-206ENST00000428842 TTC41PQ6P2S7 1318 aa11.57□□□□□ -0.56
HMGCLL1-206ENST00000428842 MYH13Q9UKX3 1938 aa11.57□□□□□ -0.56
HMGCLL1-206ENST00000428842 DTNBO60941 627 aa11.56□□□□□ -0.56
HMGCLL1-206ENST00000428842 HIBADHP31937 336 aaKnown RBP11.56□□□□□ -0.56
HMGCLL1-206ENST00000428842 VPS53Q5VIR6 699 aa11.56□□□□□ -0.56
HMGCLL1-206ENST00000428842 SP8Q8IXZ3 490 aa11.56□□□□□ -0.56
HMGCLL1-206ENST00000428842 MIGA1Q8NAN2 632 aa11.56□□□□□ -0.56
HMGCLL1-206ENST00000428842 SYT17Q9BSW7 474 aa11.56□□□□□ -0.56
HMGCLL1-206ENST00000428842 TAF6LQ9Y6J9 622 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms